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Volumn 39, Issue 6, 2012, Pages 6513-6519

Molecular cloning and characterization of a novel RING zinc-finger protein gene up-regulated under in vitro salt stress in cassava

Author keywords

Manihot esculenta; RING H2 protein; Salt stress; Transmembrane domain

Indexed keywords

COMPLEMENTARY DNA; HISTIDINE; PLANT DNA; RING ZINC FINGER PROTEIN; SODIUM CHLORIDE; UNCLASSIFIED DRUG; ZINC FINGER PROTEIN;

EID: 84864282947     PISSN: 03014851     EISSN: 15734978     Source Type: Journal    
DOI: 10.1007/s11033-012-1479-1     Document Type: Article
Times cited : (13)

References (50)
  • 1
    • 33645105776 scopus 로고    scopus 로고
    • Gene regulation during cold acclimation in plants
    • Chinnusamy V, Zhu J, Zhu J-kang (2006) Gene regulation during cold acclimation in plants. Physiol Plant 126:52-61
    • (2006) Physiol Plant , vol.126 , pp. 52-61
    • Chinnusamy, V.1    Zhu, J.2    J-Kang, Z.3
  • 2
    • 33645106225 scopus 로고    scopus 로고
    • Isolation and characterization of a novel RING-H2 finger gene induced in response to cold and drought in the interfertile Citrus relative Poncirus trifoliata
    • Şahin-Ç evik M, Moore GA (2006) Isolation and characterization of a novel RING-H2 finger gene induced in response to cold and drought in the interfertile Citrus relative Poncirus trifoliata. Physiol Plant 126(1):153-161
    • (2006) Physiol Plant , vol.126 , Issue.1 , pp. 153-161
    • Şahin-Çevik, M.1    Moore, G.A.2
  • 3
    • 0036999615 scopus 로고    scopus 로고
    • Salt and drought stress signal transduction in plants
    • DOI 10.1146/annurev.arplant.53.091401.143329
    • Zhu J-K (2002) Salt and drought stress signal transduction in plants. Annu Rev Plant Biol 53:247-273 (Pubitemid 36257495)
    • (2002) Annual Review of Plant Biology , vol.53 , pp. 247-273
    • Zhu, J.-K.1
  • 4
    • 41649104286 scopus 로고    scopus 로고
    • Molecular cloning and characterization of a gene encoding RING zinc finger ankyrin protein from drought-tolerant Artemisia desertorum
    • DOI 10.1007/s12038-008-0026-7
    • Yang X, Sun C, Hu Y, Lin Z (2008) Molecular cloning and characterization of a gene encoding RING zinc finger ankyrin protein from drought-tolerant Artemisia desertorum. J Biosci 33(1):103-112 (Pubitemid 351481884)
    • (2008) Journal of Biosciences , vol.33 , Issue.1 , pp. 103-112
    • Yang, X.1    Sun, C.2    Hu, Y.3    Lin, Z.4
  • 5
    • 33645890837 scopus 로고    scopus 로고
    • Beyond osmo-lytes and transporters: Novel plant salt-stress tolerance-related genes from transcriptional profiling data
    • Sahi C, Singh A, Blumwald E, Grover A (2006) Beyond osmo-lytes and transporters: novel plant salt-stress tolerance-related genes from transcriptional profiling data. Physiol Plant 127(1):1-9
    • (2006) Physiol Plant , vol.127 , Issue.1 , pp. 1-9
    • Sahi, C.1    Singh, A.2    Blumwald, E.3    Grover, A.4
  • 6
    • 62549153491 scopus 로고    scopus 로고
    • The arabidopsis basic leucine zipper transcription factor atbzip24 regulates complex transcriptional networks involved in abiotic stress resistance
    • Yang O, Popova OV, Süthoff U, Lüking I, Dietz K-J, Golldack D (2009) The Arabidopsis basic leucine zipper transcription factor AtbZIP24 regulates complex transcriptional networks involved in abiotic stress resistance. Gene 436(1-2):45-55
    • (2009) Gene , vol.436 , Issue.1-2 , pp. 45-55
    • Yang, O.1    Popova, O.V.2    Süthoff, U.3    Lüking, I.4    Dietz, K.-J.5    Golldack, D.6
  • 8
    • 71249085615 scopus 로고    scopus 로고
    • A putative novel transcription factor, at-skip, is involved in abscisic acid signalling and confers salt and osmotic tolerance in arabidopsis
    • Lim G-H, Zhang X, Chung M-S, Lee DJ, Woo Y-M, Cheong H-S, Kim CS (2010) A putative novel transcription factor, At-SKIP, is involved in abscisic acid signalling and confers salt and osmotic tolerance in Arabidopsis. New Phytol 185(1):103-113
    • (2010) New Phytol , vol.185 , Issue.1 , pp. 103-113
    • Lim, G.-H.1    Zhang, X.2    Chung, M.-S.3    Lee, D.J.4    Woo, Y.-M.5    Cheong, H.-S.6    Kim, C.S.7
  • 9
    • 33847236644 scopus 로고    scopus 로고
    • Role of a novel pathogen-induced pepper c3-h-c4 type ring-finger protein gene, carfpi, in disease susceptibility and osmotic stress tolerance
    • Hong JK, Choi HW, Hwang IS, Hwang BK (2007) Role of a novel pathogen-induced pepper C3-H-C4 type RING-finger protein gene, CaRFPI, in disease susceptibility and osmotic stress tolerance. Plant Mol Biol 63(4):571-588
    • (2007) Plant Mol Biol , vol.63 , Issue.4 , pp. 571-588
    • Hong, J.K.1    Choi, H.W.2    Hwang, I.S.3    Hwang, B.K.4
  • 10
    • 34548025086 scopus 로고    scopus 로고
    • Overexpression of OsCOIN, a putative cold inducible zinc finger protein, increased tolerance to chilling, salt and drought, and enhanced proline level in rice
    • DOI 10.1007/s00425-007-0548-5
    • Liu K, Wang L, Xu Y, Chen N, Ma Q, Li F, Chong K (2007) Overexpression of OsCOIN, a putative cold inducible zinc finger protein, increased tolerance to chilling, salt and drought, and enhanced proline level in rice. Planta 226(4):1007-1016 (Pubitemid 47283093)
    • (2007) Planta , vol.226 , Issue.4 , pp. 1007-1016
    • Liu, K.1    Wang, L.2    Xu, Y.3    Chen, N.4    Ma, Q.5    Li, F.6    Chong, K.7
  • 11
    • 80255140253 scopus 로고    scopus 로고
    • A novel zinc-finger-like gene from tamarix hispida is involved in salt and osmotic tolerance
    • An Y, Wang Y, Lou L, Zheng T, Qu G-Z (2011) A novel zinc-finger-like gene from Tamarix hispida is involved in salt and osmotic tolerance. J Plant Res 124(6):689-697
    • (2011) J Plant Res , vol.124 , Issue.6 , pp. 689-697
    • An, Y.1    Wang, Y.2    Lou, L.3    Zheng, T.4    Qu, G.-Z.5
  • 13
    • 0035253047 scopus 로고    scopus 로고
    • Zinc finger proteins: New insights into structural and functional diversity
    • DOI 10.1016/S0959-440X(00)00167-6
    • Laity JH, Lee BM, Wright PE (2001) Zinc finger proteins: new insights into structural and functional diversity. Curr Opin Struct Biol 11(1):39-46 (Pubitemid 32155550)
    • (2001) Current Opinion in Structural Biology , vol.11 , Issue.1 , pp. 39-46
    • Laity, J.H.1    Lee, B.M.2    Wright, P.E.3
  • 14
    • 0029977716 scopus 로고    scopus 로고
    • The RING finger domain: A recent example of a sequence-structure family
    • Borden KL, Freemont PS (1996) The RING finger domain: a recent example of a sequence-structure family. Curr Opin Struct Biol 6(3):395-401
    • (1996) Curr Opin Struct Biol , vol.6 , Issue.3 , pp. 395-401
    • Borden, K.L.1    Freemont, P.S.2
  • 15
    • 67649873095 scopus 로고    scopus 로고
    • Sequence and expression analysis of the c3hc4-type RING finger gene family in rice
    • Ma K, Xiao J, Li X, Zhang Q, Lian X (2009) Sequence and expression analysis of the C3HC4-type RING finger gene family in rice. Gene 444(1-2):33-45
    • (2009) Gene , vol.444 , Issue.1-2 , pp. 33-45
    • Ma, K.1    Xiao, J.2    Li, X.3    Zhang, Q.4    Lian, X.5
  • 16
    • 0034266806 scopus 로고    scopus 로고
    • RING finger proteins: Mediators of ubiquitin ligase activity
    • Joazeiro CAP, Weissman AM (2000) RING finger proteins: mediators of ubiquitin ligase activity. Cell 102(5):549-552
    • (2000) Cell , vol.102 , Issue.5 , pp. 549-552
    • Joazeiro, C.A.P.1    Weissman, A.M.2
  • 18
    • 0035805582 scopus 로고    scopus 로고
    • The RING heterodimer brca1-bard1 is a ubiquitin ligase inactivated by a breast cancer-derived mutation
    • Hashizume R, Fukuda M, Maeda I, Nishikawa H, Oyake D, Yabuki Y, Ogata H, Ohta T (2001) The RING heterodimer BRCA1-BARD1 is a ubiquitin ligase inactivated by a breast cancer-derived mutation. J Biol Chem 276(18):14537-14540
    • (2001) J Biol Chem , vol.276 , Issue.18 , pp. 14537-14540
    • Hashizume, R.1    Fukuda, M.2    Maeda, I.3    Nishikawa, H.4    Oyake, D.5    Yabuki, Y.6    Ogata, H.7    Ohta, T.8
  • 22
    • 9344268255 scopus 로고    scopus 로고
    • Comparative gene expression study to identify genes possibly related to storage root formation in cassava
    • de Souza CRB, Carvalho LJCB, Cascardo JCM (2004) Comparative gene expression study to identify genes possibly related to storage root formation in cassava. Protein Pept Lett 11(6): 577-582
    • (2004) Protein Pept Lett , vol.11 , Issue.6 , pp. 577-582
    • De Souza, C.R.B.1    Carvalho, L.J.C.B.2    Cascardo, J.C.M.3
  • 24
    • 1642465417 scopus 로고    scopus 로고
    • Two cassava promoters related to vascular expression and storage root formation
    • DOI 10.1007/s00425-003-1098-0
    • Zhang P, Bohl-Zenger S, Puonti-Kaerlas J, Potrykus I, Gruissem W (2003) Two cassava promoters related to vascular expression and storage root formation. Planta 218:192-203 (Pubitemid 38105657)
    • (2003) Planta , vol.218 , Issue.2 , pp. 192-203
    • Zhang, P.1    Bohl-Zenger, S.2    Puonti-Kaerlas, J.3    Potrykus, I.4    Gruissem, W.5
  • 25
    • 33846437053 scopus 로고    scopus 로고
    • Molecular characterization of the Capsicum annuum RING zinc finger protein 1 (CaRZFP1) gene induced by abiotic stresses
    • Zeba N, Ashrafuzzaman M, Hong CB (2006) Molecular characterization of the Capsicum annuum RING zinc finger protein 1 (CaRZFP1) gene induced by abiotic stresses. J Plant Biol 49(6): 484-490 (Pubitemid 46142523)
    • (2006) Journal of Plant Biology , vol.49 , Issue.6 , pp. 484-490
    • Zeba, N.1    Ashrafuzzaman, M.2    Choo, B.H.3
  • 26
    • 0001515418 scopus 로고
    • High level expression of introduced chimaeric genes in regenerated transformed plants
    • Jones JDG, Dunsumuir P, Bedbrook J (1985) High level expression of introduced chimaeric genes in regenerated transformed plants. EMBO J 4:2411-2418
    • (1985) EMBO J , vol.4 , pp. 2411-2418
    • Jones, J.D.G.1    Dunsumuir, P.2    Bedbrook, J.3
  • 27
    • 51249169259 scopus 로고
    • Simple and efficient method for isolating RNA from pine trees
    • Chang S, Puryear J, Cairney J (1993) Simple and efficient method for isolating RNA from pine trees. Plant Mol Biol Rep 11: 113-116
    • (1993) Plant Mol Biol Rep , vol.11 , pp. 113-116
    • Chang, S.1    Puryear, J.2    Cairney, J.3
  • 28
    • 0002051540 scopus 로고    scopus 로고
    • Bioedit: A user-friendly biological sequence alignment editor and analysis program for windows 95/98/nt
    • Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl Acids Symp Ser 41:95-98
    • (1999) Nucl Acids Symp ser , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 29
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22(22):4673-4680 (Pubitemid 24354800)
    • (1994) Nucleic Acids Research , vol.22 , Issue.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 33
    • 0020475449 scopus 로고
    • A simple method for displaying the hydropathic character of A protein
    • Kyte J, Doolittle RF (1982) A simple method for displaying the hydropathic character of A protein. J Mol Biol 157(1):105-132
    • (1982) J Mol Biol , vol.157 , Issue.1 , pp. 105-132
    • Kyte, J.1    Doolittle, R.F.2
  • 34
    • 0033578684 scopus 로고    scopus 로고
    • Protein secondary structure prediction based on position-specific scoring matrices
    • DOI 10.1006/jmbi.1999.3091
    • Jones DT (1999) Protein secondary structure prediction based on position-specific scoring matrices. J Mol Biol 292:195-202 (Pubitemid 29435759)
    • (1999) Journal of Molecular Biology , vol.292 , Issue.2 , pp. 195-202
    • Jones, D.T.1
  • 35
    • 3242885293 scopus 로고    scopus 로고
    • The PredictProtein server
    • DOI 10.1093/nar/gkh377
    • Rost B, Yachdav G, Liu J (2004) The PredictProtein server. Nucleic Acids Res 32(Web Server issue):W321-W326 (Pubitemid 39004075)
    • (2004) Nucleic Acids Research , vol.32 , Issue.WEB SERVER ISS.
    • Rost, B.1    Yachdav, G.2    Liu, J.3
  • 36
    • 17544404364 scopus 로고    scopus 로고
    • Evaluation and classification of ring-finger domains encoded by the arabid-opsis genome
    • RESEARCH00161-4):RESEARC001612
    • Kosarev P, Mayer KFX, Hardtke CS (2002) Evaluation and classification of RING-finger domains encoded by the Arabid-opsis genome. Genome Biol 3(4):RESEARCH0016.1-0016.12
    • (2002) Genome Biol , vol.3 , Issue.4
    • Kosarev, P.1    Mayer, K.F.X.2    Hardtke, C.S.3
  • 37
    • 0037394863 scopus 로고    scopus 로고
    • Interactions between plant RING-H2 and plant-specific NAC (NAM/ATAF1/2/CUC2) proteins: RING-H2 molecular specificity and cellular localization
    • DOI 10.1042/BJ20021123
    • Greve K, La Cour T, Jensen MK, Poulsen FM, Skriver K (2003) Interactions between plant RING-H2 and plant-specific NAC (NAM/ATAF1/2/CUC2) proteins: RING-H2 molecular specificity and cellular localization. Biochem J 371:97-108 (Pubitemid 36458083)
    • (2003) Biochemical Journal , vol.371 , Issue.1 , pp. 97-108
    • Greve, K.1    La Cour, T.2    Jensen, M.K.3    Poulsen, F.M.4    Skriver, K.5
  • 38
    • 77649296845 scopus 로고    scopus 로고
    • Cloning and molecular characterization of the potato RING finger protein gene strfp1 and its function in potato broad-spectrum resistance against phytophthora infestans
    • Ni X, Tian Z, Liu J, Song B, Xie C (2010) Cloning and molecular characterization of the potato RING finger protein gene StRFP1 and its function in potato broad-spectrum resistance against Phytophthora infestans. J Plant Physiol 167(6):488-496
    • (2010) J Plant Physiol , vol.167 , Issue.6 , pp. 488-496
    • Ni, X.1    Tian, Z.2    Liu, J.3    Song, B.4    Xie, C.5
  • 39
    • 0035312840 scopus 로고    scopus 로고
    • The Arabidopsis HOS1 gene negatively regulates cold signal transduction and encodes a RING finger protein that displays cold-regulated nucleo-cytoplasmic partitioning
    • DOI 10.1101/gad.866801
    • Lee H, Xiong L, Gong Z, Ishitani M, Stevenson B, Zhu JK (2001) The Arabidopsis HOS1 gene negatively regulates cold signal transduction and encodes a RING finger protein that displays cold-regulated nucleo-cytoplasmic partitioning. Genes Dev 15(7): 912-924 (Pubitemid 32295071)
    • (2001) Genes and Development , vol.15 , Issue.7 , pp. 912-924
    • Lee, H.1    Xiong, L.2    Gong, Z.3    Ishitani, M.4    Stevenson, B.5    Zhu, J.-K.6
  • 41
    • 67949084976 scopus 로고    scopus 로고
    • All-atom model for stabilization of alpha-helical structure in peptides by hydrocarbon staples
    • Kutchukian PS, Yang JS, Verdine GL, Shakhnovich EI (2009) All-atom model for stabilization of alpha-helical structure in peptides by hydrocarbon staples. J Am Chem Soc 131(13): 4622-4627
    • (2009) J Am Chem Soc , vol.131 , Issue.13 , pp. 4622-4627
    • Kutchukian, P.S.1    Yang, J.S.2    Verdine, G.L.3    Shakhnovich, E.I.4
  • 42
    • 34548666180 scopus 로고    scopus 로고
    • Phosphate homeostasis and root development in arabidopsis are synchronized by the zinc finger transcription factor ZAT6
    • DOI 10.1104/pp.107.101691
    • Devaiah BN, Nagarajan VK, Raghothama KG (2007) Phosphate homeostasis and root development in Arabidopsis are synchronized by the zinc finger transcription factor ZAT6. Plant Physiol 145(1):147-159 (Pubitemid 47416487)
    • (2007) Plant Physiology , vol.145 , Issue.1 , pp. 147-159
    • Devaiah, B.N.1    Nagarajan, V.K.2    Raghothama, K.G.3
  • 43
    • 0030768622 scopus 로고    scopus 로고
    • Cloning and molecular characterization of an Arabidopsis thaliana RING zinc finger gene expressed preferentially during seed development
    • DOI 10.1016/S0378-1119(97)00258-8
    • Zou J, Taylor DC (1997) Cloning and molecular characterization of an Arabidopsis thaliana RING zinc finger gene expressed preferentially during seed development. Gene 196(1-2):291-295 (Pubitemid 27380123)
    • (1997) Gene , vol.196 , Issue.1-2 , pp. 291-295
    • Zou, J.1    Taylor, D.C.2
  • 44
    • 34250325090 scopus 로고    scopus 로고
    • The rice OsLOL2 gene encodes a zinc finger protein involved in rice growth and disease resistance
    • DOI 10.1007/s00438-007-0232-2
    • Xu C, He C (2007) The rice OsLOL2 gene encodes a zinc finger protein involved in rice growth and disease resistance. Mol Genet Genomics 278(1):85-94 (Pubitemid 46911433)
    • (2007) Molecular Genetics and Genomics , vol.278 , Issue.1 , pp. 85-94
    • Xu, C.1    He, C.2
  • 45
    • 40849119615 scopus 로고    scopus 로고
    • Overexpression of a tfiiia-type zinc finger protein gene zfp252 enhances drought and salt tolerance in rice (Oryza sativa L.)
    • Xu D-Q, Huang J, Guo S-Q, Yang X, Bao Y-M, Tang H-J, Zhang H-S (2008) Overexpression of a TFIIIA-type zinc finger protein gene ZFP252 enhances drought and salt tolerance in rice (Oryza sativa L.). FEBS Lett 582(7):1037-1043
    • (2008) FEBS Lett , vol.582 , Issue.7 , pp. 1037-1043
    • Xu, D.-Q.1    Huang, J.2    Guo, S.-Q.3    Yang, X.4    Bao, Y.-M.5    Tang, H.-J.6    Zhang, H.-S.7
  • 47
    • 0035095742 scopus 로고    scopus 로고
    • Isolation, characterization and chromosomal location of a novel zinc-finger protein gene that is down-regulated by salt stress
    • DOI 10.1007/s001220051654
    • Li Z-Y, Chen S-Y (2001) Isolation, characterization and chromosomal location of a novel zinc-finger protein gene that is down-regulated by salt stress. Theor Appl Genet 102(2-3): 363-368 (Pubitemid 32205455)
    • (2001) Theoretical and Applied Genetics , vol.102 , Issue.2-3 , pp. 363-368
    • Li, Z.-Y.1    Chen, S.-Y.2
  • 48
    • 66649128241 scopus 로고    scopus 로고
    • Ghzfp1, a novel ccch-type zinc finger protein from cotton, enhances salt stress tolerance and fungal disease resistance in transgenic tobacco by interacting with gzird21a and gzipr5
    • Guo Y-H, Yu Y-P, Wang D, Wu C-A, Yang G-D, Huang J-G, Zheng C-C (2009) GhZFP1, a novel CCCH-type zinc finger protein from cotton, enhances salt stress tolerance and fungal disease resistance in transgenic tobacco by interacting with GZIRD21A and GZIPR5. New Phytol 183:62-75
    • (2009) New Phytol , vol.183 , pp. 62-75
    • Guo, Y.-H.1    Yu, Y.-P.2    Wang, D.3    Wu, C.-A.4    Yang, G.-D.5    Huang, J.-G.6    Zheng, C.-C.7
  • 49
    • 3142766061 scopus 로고    scopus 로고
    • Isolation and gene expression analysis of Arabidopsis thaliana mutants with constitutive expression of ATL2, an early elicitor-response RING-H2 zinc-finger gene
    • DOI 10.1534/genetics.104.028043
    • Serrano M, Guzmán P (2004) Isolation and gene expression analysis of Arabidopsis thaliana mutants with constitutive expression of ATL2, an early elicitor-response RING-H2 zinc-finger gene. Genetics 167(2):919-929 (Pubitemid 38931876)
    • (2004) Genetics , vol.167 , Issue.2 , pp. 919-929
    • Serrano, M.1    Guzman, P.2
  • 50
    • 14744273154 scopus 로고    scopus 로고
    • Cassava biology and physiology
    • El-Sharkawy MA (2004) Cassava biology and physiology. Plant Mol Biol 56:481-501
    • (2004) Plant Mol Biol , vol.56 , pp. 481-501
    • El-Sharkawy, M.A.1


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