-
2
-
-
65349162170
-
Conservation of core gene expression in vertebrate tissues
-
Chan, E. T. et al. (2009) Conservation of core gene expression in vertebrate tissues. J. Biol., 8, 33.
-
(2009)
J. Biol.
, vol.8
, pp. 33
-
-
Chan, E.T.1
-
3
-
-
79957842166
-
Computational methods for transcriptome annotation and quantification using RNA-seq
-
Garber, M. et al. (2011) Computational methods for transcriptome annotation and quantification using RNA-seq. Nat. Methods, 8, 469-77.
-
(2011)
Nat. Methods
, vol.8
, pp. 469-477
-
-
Garber, M.1
-
5
-
-
13444251367
-
Evolutionary significance of gene expression divergence
-
Jordan, I. K. et al. (2005) Evolutionary significance of gene expression divergence. Gene, 345, 119-126.
-
(2005)
Gene
, vol.345
, pp. 119-126
-
-
Jordan, I.K.1
-
6
-
-
22144447840
-
Parallel patterns of evolution in the genomes and transcriptomes of humans and chimpanzees
-
Khaitovich, P. et al. (2005) Parallel patterns of evolution in the genomes and transcriptomes of humans and chimpanzees. Science, 309, 1850-1854.
-
(2005)
Science
, vol.309
, pp. 1850-1854
-
-
Khaitovich, P.1
-
7
-
-
77952208125
-
Contrasting genetic paths to morphological and physiological evolution
-
Liao, B.-Y. et al. (2010) Contrasting genetic paths to morphological and physiological evolution. Proc. Natl. Acad. Sci. USA, 107, 7353-7358.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 7353-7358
-
-
Liao, B.-Y.1
-
8
-
-
33244455951
-
Evolutionary conservation of expression profiles between human and mouse orthologous genes
-
Liao, B.-Y. and Zhang, J. (2006a) Evolutionary conservation of expression profiles between human and mouse orthologous genes. Mol. Biol. Evol., 23, 530-540.
-
(2006)
Mol. Biol. Evol.
, vol.23
, pp. 530-540
-
-
Liao, B.-Y.1
Zhang, J.2
-
9
-
-
33646882591
-
Low rates of expression profile divergence in highly expressed genes and tissue-specific genes during mammalian evolution
-
Liao, B.-Y. and Zhang, J. (2006b) Low rates of expression profile divergence in highly expressed genes and tissue-specific genes during mammalian evolution. Mol. Biol. Evol., 23, 1119-1128.
-
(2006)
Mol. Biol. Evol.
, vol.23
, pp. 1119-1128
-
-
Liao, B.-Y.1
Zhang, J.2
-
10
-
-
46249106990
-
Mapping and quantifying mammalian transcriptomes by RNA-seq
-
Mortazavi, A. et al. (2008) Mapping and quantifying mammalian transcriptomes by RNA-seq. Nat. Methods, 5, 621-628.
-
(2008)
Nat. Methods
, vol.5
, pp. 621-628
-
-
Mortazavi, A.1
-
11
-
-
79959970191
-
Comparative network analysis reveals that tissue specificity and gene function are important factors influencing the mode of expression evolution in arabidopsis and rice
-
Movahedi, S. et al. (2011) Comparative network analysis reveals that tissue specificity and gene function are important factors influencing the mode of expression evolution in arabidopsis and rice. Plant Physiol., 156, 1316-30.
-
(2011)
Plant Physiol
, vol.156
, pp. 1316-1330
-
-
Movahedi, S.1
-
12
-
-
71549114836
-
A problem with the correlation coefficient as a measure of gene expression divergence
-
Pereira, V. et al. (2009) A problem with the correlation coefficient as a measure of gene expression divergence. Genetics, 183, 1597-1600.
-
(2009)
Genetics
, vol.183
, pp. 1597-1600
-
-
Pereira, V.1
-
13
-
-
0036898577
-
Microarray data normalization and transformation
-
Quackenbush, J. (2002) Microarray data normalization and transformation. Nat. Genet., 32 Suppl, 496-501.
-
(2002)
Nat. Genet., 32 Suppl
, pp. 496-501
-
-
Quackenbush, J.1
-
14
-
-
74549125753
-
An abundance of ubiquitously expressed genes revealed by tissue transcriptome sequence data
-
Ramsköld, D. et al. (2009) An abundance of ubiquitously expressed genes revealed by tissue transcriptome sequence data. PLoS Comput. Biol., 5, e1000598.
-
(2009)
PLoS Comput. Biol.
, vol.5
-
-
Ramsköld, D.1
-
15
-
-
61649083057
-
Biomart-biological queries made easy
-
Smedley, D. et al. (2009) Biomart-biological queries made easy. BMC Genomics, 10, 22.
-
(2009)
BMC Genomics
, vol.10
, pp. 22
-
-
Smedley, D.1
-
16
-
-
11144358198
-
A gene atlas of the mouse and human protein-encoding transcriptomes
-
Su, A. I. et al. (2004) A gene atlas of the mouse and human protein-encoding transcriptomes. Proc. Natl Acad. Sci. USA, 101, 6062-6067.
-
(2004)
Proc. Natl Acad. Sci. USA
, vol.101
, pp. 6062-6067
-
-
Su, A.I.1
-
17
-
-
10844290766
-
A model-based background adjustment for oligonucleotide expression arrays
-
Wu, Z. et al. (2004) A model-based background adjustment for oligonucleotide expression arrays. J. Am. Stat. Assoc., 99, 909-917.
-
(2004)
J. Am. Stat. Assoc.
, vol.99
, pp. 909-917
-
-
Wu, Z.1
-
18
-
-
34548076977
-
Assessing the conservation of mammalian gene expression using high-density exon arrays
-
Xing, Y. et al. (2007) Assessing the conservation of mammalian gene expression using high-density exon arrays. Mol. Biol. Evol., 24, 1283-1285.
-
(2007)
Mol. Biol. Evol.
, vol.24
, pp. 1283-1285
-
-
Xing, Y.1
-
19
-
-
20144376345
-
Genome-wide midrange transcription profiles reveal expression level relationships in human tissue specification
-
Yanai, I. et al. (2005) Genome-wide midrange transcription profiles reveal expression level relationships in human tissue specification. Bioinformatics, 21, 650-659.
-
(2005)
Bioinformatics
, vol.21
, pp. 650-659
-
-
Yanai, I.1
-
21
-
-
1342294092
-
Normalization for CDNA microarray data: a robust composite method addressing single and multiple slide systematic variation
-
Yang, Y. H. et al. (2002) Normalization for CDNA microarray data: a robust composite method addressing single and multiple slide systematic variation. Nucleic Acids Res., 30, e15.
-
(2002)
Nucleic Acids Res
, vol.30
-
-
Yang, Y.H.1
-
22
-
-
24744438019
-
Gene expression evolves faster in narrowly than in broadly expressed mammalian genes
-
Yang, J. et al. (2005) Gene expression evolves faster in narrowly than in broadly expressed mammalian genes. Mol. Biol. Evol., 22, 2113-2118.
-
(2005)
Mol. Biol. Evol.
, vol.22
, pp. 2113-2118
-
-
Yang, J.1
-
23
-
-
78650371571
-
Large scale comparison of global gene expression patterns in human and mouse
-
Zheng-Bradley, X. et al. (2010) Large scale comparison of global gene expression patterns in human and mouse. Genome Biol., 11, R124.
-
(2010)
Genome Biol.
, vol.11
-
-
Zheng-Bradley, X.1
|