-
1
-
-
0034598746
-
Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling
-
Alizadeh, A. A. et al. (2000) Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling. Nature, 403, 503-511.
-
(2000)
Nature
, vol.403
, pp. 503-511
-
-
Alizadeh, A.A.1
-
2
-
-
0034069495
-
Gene ontology: tool for the unification of biology
-
Ashburner, M. et al. (2000) Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat. Genet., 25, 25-29.
-
(2000)
The Gene Ontology Consortium. Nat. Genet.
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
-
3
-
-
77951972600
-
Bionet: an R-package for the functional analysis of biological networks
-
Beisser, D. et al. (2010) Bionet: an R-package for the functional analysis of biological networks. Bioinformatics, 26, 1129-1130.
-
(2010)
Bioinformatics
, vol.26
, pp. 1129-1130
-
-
Beisser, D.1
-
4
-
-
80051997026
-
Robust tests for the equality of variances
-
Brown, M. and Forsythe, A. B. (1974) Robust tests for the equality of variances. J. Am. Statis. Assoc., 69, 364-367.
-
(1974)
J. Am. Statis. Assoc.
, vol.69
, pp. 364-367
-
-
Brown, M.1
Forsythe, A.B.2
-
5
-
-
0030471795
-
The BCR-ABL tyrosine kinase inhibits apoptosis by activating a Ras-dependent signaling pathway
-
Cortez, D. et al. (1996) The BCR-ABL tyrosine kinase inhibits apoptosis by activating a Ras-dependent signaling pathway. Oncogene, 13, 2589-2594.
-
(1996)
Oncogene
, vol.13
, pp. 2589-2594
-
-
Cortez, D.1
-
6
-
-
0035905313
-
Constitutive nuclear factor kappaB activity is required for survival of activated B cell-like diffuse large B cell lymphoma cells
-
Davis, R. E. et al. (2001) Constitutive nuclear factor kappaB activity is required for survival of activated B cell-like diffuse large B cell lymphoma cells. J. Exp. Med., 194, 1861-1874.
-
(2001)
J. Exp. Med.
, vol.194
, pp. 1861-1874
-
-
Davis, R.E.1
-
7
-
-
73849145729
-
Chronic active b-cell-receptor signalling in diffuse large b-cell lymphoma
-
Davis, R. E. et al. (2010) Chronic active b-cell-receptor signalling in diffuse large b-cell lymphoma. Nature, 463, 88-92.
-
(2010)
Nature
, vol.463
, pp. 88-92
-
-
Davis, R.E.1
-
8
-
-
2442545671
-
Src kinases in Ph+ lymphoblastic leukemia
-
Deininger, M. (2004) Src kinases in Ph+ lymphoblastic leukemia. Nat. Genet., 36, 440-441.
-
(2004)
Nat. Genet.
, vol.36
, pp. 440-441
-
-
Deininger, M.1
-
9
-
-
46249128543
-
Identifying functional modules in protein-protein interaction networks: an integrated exact approach
-
Dittrich, M. T. et al. (2008) Identifying functional modules in protein-protein interaction networks: an integrated exact approach. Bioinformatics, 24, i223-i231.
-
(2008)
Bioinformatics
, vol.24
-
-
Dittrich, M.T.1
-
10
-
-
0002344794
-
Bootstrap methods: Another look at the jackknife
-
Efron, B. (1979) Bootstrap methods: Another look at the jackknife. Ann. Stat., 7, 1-26.
-
(1979)
Ann. Stat.
, vol.7
, pp. 1-26
-
-
Efron, B.1
-
11
-
-
33846689706
-
Using GOstats to test gene lists for GO term association
-
Falcon, S. and Gentleman, R. (2007) Using GOstats to test gene lists for GO term association. Bioinformatics, 23, 257-258.
-
(2007)
Bioinformatics
, vol.23
, pp. 257-258
-
-
Falcon, S.1
Gentleman, R.2
-
12
-
-
0000461280
-
Confidence limits on phylogenies: an approach using the bootstrap
-
Felsenstein, J. (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution, 39, 783-791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
13
-
-
0003991673
-
-
Sinauer Associates, Sunderland, Massachusetts
-
Felsenstein, J. (2004) Inferring Phylogenies. Sinauer Associates, Sunderland, Massachusetts.
-
(2004)
Inferring Phylogenies
-
-
Felsenstein, J.1
-
14
-
-
84862019471
-
Regulation of stat3 by histone deacetylase-3 in diffuse large b-cell lymphoma: implications for therapy
-
November 2011; doi:10.1038/leu. 2011. 340
-
Gupta, M. et al. (2011) Regulation of stat3 by histone deacetylase-3 in diffuse large b-cell lymphoma: implications for therapy. Leukemia, advance online publication, 25 November 2011; doi:10. 1038/leu. 2011. 340.
-
(2011)
Leukemia, advance online publication
, pp. 25
-
-
Gupta, M.1
-
15
-
-
77955134007
-
Clinical utility of microarray-based gene expression profiling in the diagnosis and subclassification of leukemia: report from the international microarray innovations in leukemia study group
-
Haferlach, T. et al. (2010) Clinical utility of microarray-based gene expression profiling in the diagnosis and subclassification of leukemia: report from the international microarray innovations in leukemia study group. J. Clin. Oncol., 28, 2529-2537.
-
(2010)
J. Clin. Oncol.
, vol.28
, pp. 2529-2537
-
-
Haferlach, T.1
-
16
-
-
0000801240
-
Discovering regulatory and signalling circuits in molecular interaction networks
-
Ideker, T. et al. (2002) Discovering regulatory and signalling circuits in molecular interaction networks. Bioinformatics, 18 (Suppl. 1), S233-S240.
-
(2002)
Bioinformatics
, vol.18
, Issue.SUPPL. 1
-
-
Ideker, T.1
-
17
-
-
48749084082
-
An international standardization programme towards the application of gene expression profiling in routine leukaemia diagnostics: the microarray innovations in leukemia study prephase
-
Kohlmann, A. et al. (2008) An international standardization programme towards the application of gene expression profiling in routine leukaemia diagnostics: the microarray innovations in leukemia study prephase. Br. J. Haematol., 142, 802-807.
-
(2008)
Br. J. Haematol.
, vol.142
, pp. 802-807
-
-
Kohlmann, A.1
-
18
-
-
0003139708
-
Robust tests for equality variances
-
Olkin, I. (ed.), Stanford Univ. Press., Palo Alto, CA
-
Levene, H. (1960) Robust tests for equality variances. In Olkin, I. (ed.) Contributions to Probability and Statistics. Stanford Univ. Press., Palo Alto, CA.
-
(1960)
Contributions to Probability and Statistics
-
-
Levene, H.1
-
19
-
-
33644877439
-
Human protein reference database-2006 update
-
Mishra, G. R. et al. (2006) Human protein reference database-2006 update. Nucleic Acids Res, 34, D411-D414.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Mishra, G.R.1
-
20
-
-
0038156106
-
Estimating the occurrence of false positives and false negatives in microarray studies by approximating and partitioning the empirical distribution of p-values
-
Pounds, S. and Morris, S. W. (2003) Estimating the occurrence of false positives and false negatives in microarray studies by approximating and partitioning the empirical distribution of p-values. Bioinformatics, 19, 1236-1242.
-
(2003)
Bioinformatics
, vol.19
, pp. 1236-1242
-
-
Pounds, S.1
Morris, S.W.2
-
21
-
-
33947730844
-
Identifying functional modules in the physical interactome of saccharomyces cerevisiae
-
Pu, S. et al. (2007) Identifying functional modules in the physical interactome of saccharomyces cerevisiae. Proteomics, 7, 944-960.
-
(2007)
Proteomics
, vol.7
, pp. 944-960
-
-
Pu, S.1
-
22
-
-
0001610304
-
Notes on bias in estimation
-
Quenouille, M. H. (1956) Notes on bias in estimation. Biometrika, 43, 353-360.
-
(1956)
Biometrika
, vol.43
, pp. 353-360
-
-
Quenouille, M.H.1
-
23
-
-
0037142053
-
The use of molecular profiling to predict survival after chemotherapy for diffuse large-B-cell lymphoma
-
Rosenwald, A. et al. (2002) The use of molecular profiling to predict survival after chemotherapy for diffuse large-B-cell lymphoma. N. Engl. J. Med., 346, 1937-1947.
-
(2002)
N. Engl. J. Med.
, vol.346
, pp. 1937-1947
-
-
Rosenwald, A.1
-
24
-
-
33645983211
-
Efficient algorithms for detecting signaling pathways in protein interaction networks
-
Scott, J. et al. (2006) Efficient algorithms for detecting signaling pathways in protein interaction networks. J. Comput. Biol., 13, 133-144.
-
(2006)
J. Comput. Biol.
, vol.13
, pp. 133-144
-
-
Scott, J.1
-
25
-
-
78651324347
-
The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored
-
Szklarczyk, D. et al. (2011) The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored. Nucleic Acids Res., 39, D561-D568.
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Szklarczyk, D.1
-
26
-
-
0037472637
-
BCR-ABL binds to IRS-1 and IRS-1 phosphorylation is inhibited by imatinib in K562 cells
-
Traina, F. et al. (2003) BCR-ABL binds to IRS-1 and IRS-1 phosphorylation is inhibited by imatinib in K562 cells. FEBS Lett, 535, 17-22.
-
(2003)
FEBS Lett
, vol.535
, pp. 17-22
-
-
Traina, F.1
-
27
-
-
0001617782
-
Bias and confidence in not quite large sample
-
Tukey, J. (1958) Bias and confidence in not quite large sample. Ann. Math. Statist., 29, 614.
-
(1958)
Ann. Math. Statist.
, vol.29
, pp. 614
-
-
Tukey, J.1
-
28
-
-
34548742517
-
Identification of functional modules using network topology and high-throughput data
-
Ulitsky, I. and Shamir, R. (2007) Identification of functional modules using network topology and high-throughput data. BMC. Syst. Biol., 1, 8.
-
(2007)
BMC. Syst. Biol.
, vol.1
, pp. 8
-
-
Ulitsky, I.1
Shamir, R.2
-
31
-
-
58149271021
-
Integrated network analysis platform for protein-protein interactions
-
Wu, J. et al. (2009) Integrated network analysis platform for protein-protein interactions. Nat. Methods, 6, 75-77.
-
(2009)
Nat. Methods
, vol.6
, pp. 75-77
-
-
Wu, J.1
|