Biofilm Growth and Near-Infrared Radiation-Driven Photosynthesis of the Chlorophyll d-Containing Cyanobacterium Acaryochloris marina

Applied and Environmental Microbiology

Volumn 78, Issue 11, 2012, Pages 3896-3904

  Behrendt, Lars ^a   Schrameyer, Verena ^b   Qvortrup, Klaus ^a   Lundin, Luisa ^a   Sørensen, Søren J ^a   Larkum, Anthony W D ^b   Kühl, Michael ^a,b,c  

^a UNIVERSITY OF COPENHAGEN   (Denmark)

^b UNIVERSITY OF TECHNOLOGY SYDNEY   (Australia)

^c NANYANG TECHNOLOGICAL UNIVERSITY   (Singapore)

Author keywords

[No Author keywords available]

Indexed keywords

ALGINATE BEADS; BIOFILM GROWTH; BIOPHYSICAL CHARACTERIZATION; BLUE LIGHT; CELL CLUSTERS; CELL-SPECIFIC GROWTH RATE; CONCENTRATION GRADIENTS; CYANOBACTERIUM; ENVIRONMENTAL CONDITIONS; GROSS PHOTOSYNTHESIS; GROWTH MODES; HYPEROXIA; NEAR INFRARED; NEAR-INFRARED RADIATIONS; PHOTON IRRADIANCE; PHOTOSYNTHETIC EFFICIENCY; STANDARD DEVIATION; VISIBLE LIGHT;

BIOFILMS; CELL CULTURE; CHLOROPHYLL; INFRARED RADIATION; MARINAS; PHOTOSYNTHESIS;

INFRARED DEVICES;

CHLOROPHYLL; CHLOROPHYLL D; OXYGEN;

BIOFILM; CHLOROPHYLL; CULTIVATION; CYANOBACTERIUM; ENVIRONMENTAL CONDITIONS; GROWTH RATE; NEAR INFRARED; PHOTOSYNTHESIS; POPULATION STRUCTURE; RADIATION BALANCE;

ARTICLE; BIOFILM; CYANOBACTERIUM; GROWTH, DEVELOPMENT AND AGING; IMMOBILIZED CELL; INFRARED RADIATION; METABOLISM; PHOTOSYNTHESIS; PHYSIOLOGY; RADIATION EXPOSURE;

BIOFILMS; CELLS, IMMOBILIZED; CHLOROPHYLL; CYANOBACTERIA; INFRARED RAYS; OXYGEN; PHOTOSYNTHESIS;

ACARYOCHLORIS MARINA;

EID: 84864110403     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.00397-12     Document Type: Article

References (56)

1. Akiyama M, et al. 2001. Detection of chlorophyll d and pheophytin a in a chlorophyll d-dominating oxygenic photosynthetic prokaryote Acaryochloris marina. Anal. Sci. 17:205-208.
2. Allakhverdiev SI, et al. 2011. Redox potentials of primary electron acceptor quinone molecule (QA)_ and conserved energetics of photosystem II in cyanobacteria with chlorophyll a and chlorophyll d. Proc. Natl. Acad. Sci. U. S. A. 108:8054-8058.
3. Al-Najjar MAA, de Beer D, Jorgensen BB, Kühl M, Polerecky L. 2010. Conversion and conservation of light energy in a photosynthetic microbial mat ecosystem. ISME J. 4:440-449.
4. Al-Najjar MAA, de Beer D, Kühl M, Polerecky L. 2012. Light utilization efficiency in photosynthetic microbial mats. Environ. Microbiol. 14:982- 992.
5. Baker NR. 2008. Chlorophyll fluorescence: a probe of photosynthesis in vivo. Annu. Rev. Plant Biol. 59:89 -113.
6. Behrendt L, et al. 2011. Endolithic chlorophyll d-containing phototrophs. ISME J. 5:1072-1076.
7. Behrendt L, et al. 1 December 2011. Microbial diversity of biofilm communities in microniches associated with the didemnid ascidian Lissoclinum patella. ISME J. [Epub ahead of print].
8. Boichenko V, Klimov V, Miyashita H, Miyachi S. 2000. Functional characteristics of chlorophyll d-predominating photosynthetic apparatus in intact cells of Acaryochloris marina. Photosynth. Res. 65:269 -277.
9. Chan Y-W, et al. 2007. Pigment composition and adaptation in freeliving and symbiotic strains of Acaryochloris marina. FEMS Microbiol. Ecol. 61:65-73.
10. Chen M, Quinnell RG, Larkum AWD. 2002. The major light-harvesting pigment protein of Acaryochloris marina. FEBS Lett. 514:149 -152.
11. Chen M, et al. 2005. The nature of the photosystem II reaction centre in the chlorophyll d-containing prokaryote, Acaryochloris marina. Photochem. Photobiol. Sci. 4:1060 -1064.
12. Costerton JW, et al. 1987. Bacterial biofilms in nature and disease. Annu. Rev. Microbiol. 41:435- 464.
13. Davey ME, O'Toole GA. 2000. Microbial biofilms: from ecology to molecular genetics. Microbiol. Mol. Biol. Rev. 64:847- 867.
14. de los Ríos A, Grube M, Sancho LG, Ascaso C. 2007. Ultrastructural and genetic characteristics of endolithic cyanobacterial biofilms colonizing Antarctic granite rocks. FEMS Microbiol. Ecol. 59:386 -395.
15. Doron S, Friedman M, Falach M, Sadovnic E, Zvia H. 2001. Antibacterial effect of parabens against planktonic and biofilm Streptococcus sobrinus. Int. J. Antimicrob. Agents 18:575-578.
16. Drenkard E, Ausubel FM. 2002. Pseudomonas biofilm formation and antibiotic resistance are linked to phenotypic variation. Nature 416:740- 743.
17. Duxbury Z, Schliep M, Ritchie R, Larkum A, Chen M. 2009. Chromatic photoacclimation extends utilisable photosynthetically active radiation in the chlorophyll d-containing cyanobacterium Acaryochloris marina. Photosynth. Res. 101:69 -75.
18. Gloag RS, Ritchie RJ, Chen M, Larkum AWD, Quinnell RG. 2007. Chromatic photoacclimation, photosynthetic electron transport and oxygen evolution in the chlorophyll d-containing oxyphotobacterium Acaryochloris marina. Biochim. Biophys. Acta 1767:127-135.
19. Jiménez-Pérez MV, Sánchez-Castillo P, Romera O, Fernández-Moreno D, Pérez-Martínez C. 2004. Growth and nutrient removal in free and immobilized planktonic green algae isolated from pig manure. Enzyme Microb. Technol. 34:392-398.
20. Kashiyama Y, et al. 2008. Evidence for global chlorophyll d. Science 321:658.
21. Kühl M, Chen M, Larkum AWD. 2007. Biology of the chlorophyll d-containing cyanobacterium Acaryochloris Marina, p 101-123. In Seckbach (ed), J. Algae and Cyanobacteria in extreme environments, vol 11. Springer, Dordrecht, Netherlands.
22. Kühl M, Chen M, Ralph PJ, Schreiber U, Larkum AWD. 2005. A niche for cyanobacteria containing chlorophyll d. Nature 433:820.
23. Kühl M, Glud RN, Ploug H, Ramsing NB. 1996. Microenvironmental control of photosynthesis and photosynthesis-coupled respiration in an epilithic cyanobacterial biofilm. J. Phycol. 32:799-812.
24. Larkum AWD, Kühl M. 2005. Chlorophyll d: the puzzle resolved. Trends Plant Sci. 10:355-357.
25. Lau PS, Tam NFY, Wong YS. 1998. Effect of carrageenan immobilization on the physiological activities of Chlorella vulgaris. Bioresour. Technol. 63:115-121.
26. Magnusson SH, Fine M, Kühl M. 2007. Light microclimate of endolithic phototrophs in the scleractinian corals Montipora monasteriata and Porites cylindrica. Marine Ecol. Prog. Ser. 332:119 -128.
27. Marie D, Partensky F, Vaulot D, Brussaard C. 2001. Enumeration of phytoplankton, bacteria, and viruses in marine samples. Curr. Protoc. Cytomet. 11:11.11.1-11.11.15.
28. Marquardt J, Mörschel E, Rhiel E, Westermann M. 2000. Ultrastructure of Acaryochloris marina, an oxyphotobacterium containing mainly chlorophyll d. Arch. Microbiol. 174:181-188.
29. Mielke SP, Kiang NY, Blankenship RE, Gunner MR, Mauzerall D. 2011. Efficiency of photosynthesis in a Chl d-utilizing cyanobacterium is comparable to or higher than that in Chl a-utilizing oxygenic species. Biochim. Biophys. Acta 1807:1231-1236.
30. Miyashita H, et al. 1997. Pigment composition of a novel oxygenic photosynthetic prokaryote containing chlorophyll d as the major chlorophyll. Plant Cell Physiol. 38:274 -281.
31. Miyashita H, Ikemoto H, Kurano N, Miyachi S, Chihara M. 2003. Acaryochloris marina gen. et sp. nov. (cyanobacteria), an oxygenic photosynthetic prokaryote containing Chl d as a major pigment. J. Phycol. 39: 1247-1253.
32. Mohr R, et al. 2010. A new chlorophyll d-containing cyanobacterium: evidence for niche adaptation in the genus Acaryochloris. ISME J. 4:1456- 1469.
33. Moreira SM, Moreira-Santos M, Guilhermino L, Ribeiro R. 2006. Immobilization of the marine microalga Phaeodactylum tricornutum in alginate for in situ experiments: bead stability and suitability. Enzyme Microb. Technol. 38:135-141.
34. Ohashi S, et al. 2008. Unique photosystems in Acaryochloris marina. Photosynth. Res. 98:141-149.
35. Pane L, Feletti M, Bertino C, Carli A. 1998. Viability of the marine microalga Tetraselmis suecica grown free and immobilized in alginate beads. Aquac. Int. 6:411- 420.
36. Pfreundt U, Stal LJ, Vos B, Hess WR. 12 January 2012. Dinitrogen fixation in a unicellular chlorophyll d-containing cyanobacterium. ISME J. [Epub ahead of print].
37. Ralph PJ, Schreiber U, Gademann R, Kühl M, Larkum AWD. 2005. Coral photobiology studied with a new imaging pulse amplitude modulated fluorometer. J. Phycol. 41:335-342.
38. Resch A, et al. 2006. Comparative proteome analysis of Staphylococcus aureus biofilm and planktonic cells and correlation with transcriptome profiling. Proteomics 6:1867-1877.
39. Revsbech NP. 1989. An oxygen microsensor with a guard cathode. Limnol. Oceanogr. 34:474-478.
40. Revsbech NP, BBJørgensen Blackburn TH, Cohen Y. 1983. Microelectrode studies of the photosynthesis and O2, H2S, and pH profiles of a microbial mat. Limnol. Oceanogr. 28:1062-1074.
41. Ritchie R. 2006. Consistent sets of spectrophotometric chlorophyll equations for acetone, methanol and ethanol solvents. Photosynth. Res. 89:27-41.
42. Ritchie R. 2008. Fitting light saturation curves measured using modulated fluorometry. Photosynth. Res. 96:201-215.
43. Ruiz-Marin A, Mendoza-Espinosa LG, Stephenson T. 2010. Growth and nutrient removal in free and immobilized green algae in batch and semicontinuous cultures treating real wastewater. Bioresour. Technol. 101:58-64.
44. Sampathkumar B, et al. 2006. Transcriptional and translational expression patterns associated with immobilized growth of Campylobacter jejuni. Microbiology 152:567-577.
45. 18O labeling of chlorophyll d in Acaryochloris marina reveals that chlorophyll a and molecular oxygen are precursors. J. Biol. Chem. 285:28450 -28456.
46. Schreiber U. 2004. Pulse-amplitude-modulation (PAM) fluorometry and saturation pulse method: an overview, p 279-319. In Papageorgiou GCG (ed), Chlorophyll fluorescence: a signature of photosynthesis. Kluwer, Dordrecht, Netherlands.
47. Swingley WD, et al. 2008. Niche adaptation and genome expansion in the chlorophyll d-producing cyanobacterium Acaryochloris marina. Proc. Natl. Acad. Sci. U. S. A. 105:2005-2010.
48. Swingley WD, Hohmann-Marriott MF, Le Olson T, Blankenship RE. 2005. Effect of iron on growth and ultrastructure of Acaryochloris marina. Appl. Environ. Microbiol. 71:8606-8610.
49. Theiss C, et al. 2011. Excitation energy transfer in intact cells and in the phycobiliprotein antennae of the chlorophyll d containing cyanobacterium Acaryochloris marina. J. Plant Physiol. 168:1473-1487.
50. Tomo T, Allakhverdiev SI, Mimuro M. 2011. Constitution and energetics of photosystem I and photosystem II in the chlorophyll d-dominated cyanobacterium Acaryochloris marina. J. Photochem. Photobiol. B 104: 333-340.
51. Ulstrup K, Ralph P, Larkum A, Kühl M. 2006. Intra-colonial variability in light acclimation of zooxanthellae in coral tissues of Pocillopora damicornis. Marine Biol. 149:1325-1335.
52. Van Loosdrecht MCM, Heijnen JJ. 1996. Biofilm processes, p 255-271. In Willaert RG, Baron GV, De Backer L (ed), Immobilised living cell systems: modelling and experimental methods. J. Wiley & Sons, Hoboken, NJ.
53. Vilain S, et al. 2004. Comparative proteomic analysis of planktonic and immobilized Pseudomonas aeruginosa cells: a multivariate statistical approach. Anal. Biochem. 329:120 -130.
54. Wang X, Gong Z, Li P, Zhang L. 2007. Degradation of pyrene in soils by free and immobilized yeasts, Candida tropicalis. Bull. Environ. Contam. Toxicol. 78:522-526.
55. Wijfels RH, De Gooijer CD, Tramper J. 1996. Gel immobilised living cell systems: part 2, p 215-236. In Willaert RG, Baron GV, De Backer L (ed), Immobilised living cell systems: modelling and experimental methods. J. Wiley & Sons, Hoboken, NJ.
56. Willaert R. 1996. Gel immobilized living cell systems: part 1, p 197-213. In Willaert RG, Baron GV, De Backer L (ed), Immobilised living cell systems: modelling and experimental methods. J. Wiley & Sons, Hoboken, NJ.