메뉴 건너뛰기




Volumn , Issue , 2012, Pages 169-176

An integrative bioinformatics approach for identifying subtypes and subtype-specific drivers in cancer

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEX DISEASE; COPY NUMBER; POINT MUTATIONS;

EID: 84864033158     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/CIBCB.2012.6217227     Document Type: Conference Paper
Times cited : (1)

References (22)
  • 1
    • 0034680102 scopus 로고    scopus 로고
    • Molecular portraits of human breast tumours
    • C. M. Perou, T. Sorlie et al., "Molecular portraits of human breast tumours," Nature, vol. 406, no. 6797, pp. 747-52, 2000.
    • (2000) Nature , vol.406 , Issue.6797 , pp. 747-752
    • Perou, C.M.1    Sorlie, T.2
  • 2
    • 73649123907 scopus 로고    scopus 로고
    • Integrated genomic analysis identifies clinically relevant subtypes of glioblastoma characterized by abnormalities in pdgfra, idh1, egfr, and nf1
    • R. G. Verhaak, K. A. Hoadley et al., "Integrated genomic analysis identifies clinically relevant subtypes of glioblastoma characterized by abnormalities in pdgfra, idh1, egfr, and nf1," Cancer Cell, vol. 17, no. 1, pp. 98-110, 2010.
    • (2010) Cancer Cell , vol.17 , Issue.1 , pp. 98-110
    • Verhaak, R.G.1    Hoadley, K.A.2
  • 3
    • 52449119078 scopus 로고    scopus 로고
    • Integrated genomics identifies five medulloblastoma subtypes with distinct genetic profiles, pathway signatures and clinicopathological features
    • M. Kool, J. Koster et al., "Integrated genomics identifies five medulloblastoma subtypes with distinct genetic profiles, pathway signatures and clinicopathological features," PLoS One, vol. 3, no. 8, p. e3088, 2008.
    • (2008) PLoS One , vol.3 , Issue.8
    • Kool, M.1    Koster, J.2
  • 4
    • 78751676408 scopus 로고    scopus 로고
    • Cells of origin in cancer
    • J. E. Visvader, "Cells of origin in cancer," Nature, vol. 469, no. 7330, pp. 314-322, 2011.
    • (2011) Nature , vol.469 , Issue.7330 , pp. 314-322
    • Visvader, J.E.1
  • 5
    • 0033569406 scopus 로고    scopus 로고
    • Molecular classification of cancer: Class discovery and class prediction by gene expression monitoring
    • T. R. Golub, D. K. Slonim et al., "Molecular classification of cancer: class discovery and class prediction by gene expression monitoring," Science, vol. 286, no. 5439, pp. 531-7, 1999.
    • (1999) Science , vol.286 , Issue.5439 , pp. 531-537
    • Golub, T.R.1    Slonim, D.K.2
  • 6
    • 19344375744 scopus 로고    scopus 로고
    • Semi-supervised methods to predict patient survival from gene expression data
    • Apr
    • E. Bair and R. Tibshirani, "Semi-supervised methods to predict patient survival from gene expression data." PLoS Biol, vol. 2, no. 4, p. E108, Apr 2004.
    • (2004) PLoS Biol , vol.2 , Issue.4
    • Bair, E.1    Tibshirani, R.2
  • 7
    • 27744601822 scopus 로고    scopus 로고
    • Improving molecular cancer class discovery through sparse non-negative matrix factorization
    • Y. Gao and G. Church, "Improving molecular cancer class discovery through sparse non-negative matrix factorization," Bioinformatics, vol. 21, no. 21, pp. 3970-5, 2005.
    • (2005) Bioinformatics , vol.21 , Issue.21 , pp. 3970-3975
    • Gao, Y.1    Church, G.2
  • 8
    • 64749094310 scopus 로고    scopus 로고
    • The cancer genome
    • M. R. Stratton, P. J. Campbell, and P. A. Futreal, "The cancer genome," Nature, vol. 458, no. 7239, pp. 719-24, 2009.
    • (2009) Nature , vol.458 , Issue.7239 , pp. 719-724
    • Stratton, M.R.1    Campbell, P.J.2    Futreal, P.A.3
  • 9
    • 79954991010 scopus 로고    scopus 로고
    • Integrative genomic analysis of medulloblastoma identifies a molecular subgroup that drives poor clinical outcome
    • Y. Cho, P. Tamayo et al., "Integrative genomic analysis of medulloblastoma identifies a molecular subgroup that drives poor clinical outcome," J Clin Oncol., vol. 12, no. 6, pp. 1424-1430, 2010.
    • (2010) J Clin Oncol. , vol.12 , Issue.6 , pp. 1424-1430
    • Cho, Y.1    Tamayo, P.2
  • 10
    • 77956231986 scopus 로고    scopus 로고
    • Medulloblastoma comprises four distinct diseases
    • P. A. Northcott, A. Korshunov et al., "Medulloblastoma comprises four distinct diseases," Journal of Clinical Oncology, vol. 12, no. 6, pp. 1408-1414, 2010.
    • (2010) Journal of Clinical Oncology , vol.12 , Issue.6 , pp. 1408-1414
    • Northcott, P.A.1    Korshunov, A.2
  • 12
    • 0035532141 scopus 로고    scopus 로고
    • Estimating the number of clusters in a data set via the gap statistic
    • R. Tibshirani, G. Walther, and T. Hastie, "Estimating the number of clusters in a data set via the gap statistic," J. R. Stat. Soc. Ser. BMethodological, vol. 63, pp. 411-423, 2001.
    • (2001) J. R. Stat. Soc. Ser. BMethodological , vol.63 , pp. 411-423
    • Tibshirani, R.1    Walther, G.2    Hastie, T.3
  • 13
    • 0003751642 scopus 로고    scopus 로고
    • ser. Wiley series in probability and statistics Applied probability and statistics section. New York: Wiley
    • M. G. Schimek, Smoothing and regression: approaches, computation, and application, ser. Wiley series in probability and statistics Applied probability and statistics section. New York: Wiley, 2000.
    • (2000) Smoothing and Regression: Approaches, Computation, and Application
    • Schimek, M.G.1
  • 14
    • 78650811198 scopus 로고    scopus 로고
    • Subtypes of medulloblastoma have distinct developmental origins
    • P. Gibson, Y. Tong et al., "Subtypes of medulloblastoma have distinct developmental origins," Nature, vol. 468, no. 7327, pp. 1095-9, 2010.
    • (2010) Nature , vol.468 , Issue.7327 , pp. 1095-1099
    • Gibson, P.1    Tong, Y.2
  • 16
    • 0038724494 scopus 로고    scopus 로고
    • Consensus clustering: A resamplingbased method for class discovery and visualization of gene expression microarray data
    • S. Monti, P. Tamayo et al., "Consensus clustering: A resamplingbased method for class discovery and visualization of gene expression microarray data," Machine Learning, vol. 52, no. 1-2, pp. 91-118, 2003.
    • (2003) Machine Learning , vol.52 , Issue.1-2 , pp. 91-118
    • Monti, S.1    Tamayo, P.2
  • 18
    • 33750410937 scopus 로고    scopus 로고
    • Ada: An r package for stochastic boostong
    • October
    • M. Culp, K. Johnson, and G. Michailidis, "ada: an r package for stochastic boostong," Journal of Statistical Software, vol. 17, no. 2, pp. pp. 1-27, October 2006.
    • (2006) Journal of Statistical Software , vol.17 , Issue.2 , pp. 1-27
    • Culp, M.1    Johnson, K.2    Michailidis, G.3
  • 19
    • 33646393287 scopus 로고    scopus 로고
    • Predicting protein structural class with adaboost learner
    • B. Niu, Y.-D. Cai et al., "Predicting protein structural class with adaboost learner." Protein Pept Lett, vol. 13, no. 5, pp. 489-492, 2006.
    • (2006) Protein Pept Lett , vol.13 , Issue.5 , pp. 489-492
    • Niu, B.1    Cai, Y.-D.2
  • 20
    • 0035942271 scopus 로고    scopus 로고
    • Significance analysis of microarrays applied to the ionizing radiation response
    • V. G. Tusher, R. Tibshirani, and G. Chu, "Significance analysis of microarrays applied to the ionizing radiation response," Proc Natl Acad Sci U S A, vol. 98, no. 9, pp. 5116-21, 2001.
    • (2001) Proc Natl Acad Sci U S A , vol.98 , Issue.9 , pp. 5116-5121
    • Tusher, V.G.1    Tibshirani, R.2    Chu, G.3
  • 21
    • 38049100456 scopus 로고    scopus 로고
    • Assessing the significance of chromosomal aberrations in cancer: Methodology and application to glioma
    • R. Beroukhim, G. Getz et al., "Assessing the significance of chromosomal aberrations in cancer: Methodology and application to glioma," Proc. Nat. Acad. of Sci., vol. 104, no. 50, pp. 20 007-20 012, 2007.
    • (2007) Proc. Nat. Acad. of Sci. , vol.104 , Issue.50 , pp. 20007-20012
    • Beroukhim, R.1    Getz, G.2
  • 22
    • 43449124710 scopus 로고    scopus 로고
    • The gene expression profiles of medulloblastoma cell lines resistant to preactivated cyclophosphamide
    • May
    • M. D. Bacolod, S. M. Lin et al., "The gene expression profiles of medulloblastoma cell lines resistant to preactivated cyclophosphamide." Curr Cancer Drug Targets, vol. 8, no. 3, pp. 172-179, May 2008.
    • (2008) Curr Cancer Drug Targets , vol.8 , Issue.3 , pp. 172-179
    • Bacolod, M.D.1    Lin, S.M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.