Genome sequence of the plant growth-promoting rhizobacterium Bacillus sp. Strain JS

Journal of Bacteriology

Volumn 194, Issue 14, 2012, Pages 3760-3761

  Song, Ju Yeon ^a   Kim, Hyun A ^a,b   Kim, Ji Seoung ^c   Kim, Seon Young ^a,b   Jeong, Haeyoung ^a,b   Kang, Sung Gyun ^b,d   Kim, Byung Kwon ^a   Kwon, Soon Kyeong ^a,b   Lee, Choong Hoon ^a   Yu, Dong Su ^a   Kim, Beom Seok ^e   Kim, Sun Hyung ^c   Kwon, Suk Yoon ^a,b   Kim, Jihyun F ^a,b,f  

^a Korea Research Institute of Bioscience and Biotechnology (KRIBB)   (South Korea)

^b University of Science and Technology (UST)   (South Korea)

^c University of Seoul   (South Korea)

^d Korea Research Institute of Ships and Ocean Engineering   (South Korea)

^e Korea University   (South Korea)

^f Yonsei University   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

2,3 BUTANEDIOL; ACETOIN; ACOA PROTEIN; ACOB PROTEIN; ALSD PROTEIN; ALSS PROTEIN; BACTERIAL PROTEIN; BACTERIAL RNA; RIBOSOME RNA; TRANSFER RNA; UNCLASSIFIED DRUG;

ANTIBIOSIS; BACILLUS; BACILLUS PUMILUS; BACTERIAL GENOME; BACTERIAL STRAIN; BACTERIUM ISOLATION; GENE SEQUENCE; GENETIC POLYMORPHISM; NONHUMAN; NOTE; NUCLEOTIDE SEQUENCE; OPERON; PLANT GROWTH; PRIORITY JOURNAL;

BACILLUS; GENE EXPRESSION REGULATION, BACTERIAL; GENOME, BACTERIAL; MOLECULAR SEQUENCE DATA; PLANT DEVELOPMENT; PLANTS;

BACILLUS SP.; BACTERIA (MICROORGANISMS); LACTUCA; NICOTIANA TABACUM; RHIZOBIUM;

EID: 84864015467     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.00676-12     Document Type: Note

References (18)

1. Aziz RK, et al. 2008. The RAST Server: rapid annotations using subsystems technology. BMC Genomics 9:75. doi:10.1186/1471-2164-9-75.
2. Boetzer M, Henkel CV, Jansen HJ, Butler D, Pirovano W. 2011. Scaffolding pre-assembled contigs using SSPACE. Bioinformatics 27: 578-579.
3. Dobbelaere S, Croonenborghs A, Thys A, Vande Broek A, Vanderleyden J. 1999. Phytostimulatory effect of Azospirillum brasilense wild type and mutant strains altered in IAA production on wheat. Plant Soil 212: 155-164.
4. Jeong H, Yoon SH, Yu DS, Oh TK, Kim JF. 2008. Recent progress of microbial genome projects in Korea. Biotechnol. J. 3:601- 611.
5. Kim JF, et al. 2010. Genome sequence of the polymyxin-producing plantprobiotic rhizobacterium Paenibacillus polymyxa E681. J. Bacteriol. 192: 6103-6104.
6. Kloepper JW, Leong J, Teintze M, Schroth MN. 1980. Enhanced plant growth by siderophores produced by plant growth-promoting rhizobacteria. Nature 286:885- 886.
7. Kuiper I, Bloemberg GV, Lugtenberg BJ. 2001. Selection of a plantbacterium pair as a novel tool for rhizostimulation of polycyclic aromatic hydrocarbon-degrading bacteria. Mol. Plant Microbe Interact. 14:1197- 1205.
8. Nihorimbere V. 2010. Beneficial effects of Bacillus subtilis on field-grown tomato in Burundi: reduction of local Fusarium disease and growth promotion. Afr. J. Microbiol. Res. 4:1135-1142.
9. Ongena M, et al. 2005. Bacillus subtilis M4 decreases plant susceptibility towards fungal pathogens by increasing host resistance associated with differential gene expression. Appl. Microbiol. Biotechnol. 67:692- 698.
10. Ongena M, et al. 2007. Surfactin and fengycin lipopeptides of Bacillus subtilis as elicitors of induced systemic resistance in plants. Environ. Microbiol. 9:1084 -1090.
11. Ping L, Boland W. 2004. Signals from the underground: bacterial volatiles promote growth in Arabidopsis. Trends Plant Sci. 9:263-266.
12. Richter M, Rossello-Mora R. 2009. Shifting the genomic gold standard for the prokaryotic species definition. Proc. Natl. Acad. Sci. U. S. A. 106: 19126-19131.
13. Rudrappa T, et al. 2010. The rhizobacterial elicitor acetoin induces systemic resistance in Arabidopsis thaliana. Commun. Integr. Biol. 3:130- 138.
14. Ryu CM, et al. 2004. Bacterial volatiles induce systemic resistance in Arabidopsis. Plant Physiol. 134:1017-1026.
15. Ryu CM, et al. 2003. Bacterial volatiles promote growth in Arabidopsis. Proc. Natl. Acad. Sci. U. S. A. 100:4927- 4932.
16. Stein T. 2005. Bacillus subtilis antibiotics: structures, syntheses and specific functions. Mol. Microbiol. 56:845- 857.
17. Tsai IJ, Otto TD, Berriman M. 2010. Improving draft assemblies by iterative mapping and assembly of short reads to eliminate gaps. Genome Biol. 11:R41. doi:10.1186/gb-2010-11-4-r41.
18. van Rhijn P, Vanderleyden J. 1995. The Rhizobium-plant symbiosis. Microbiol. Rev. 59:124 -142.