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Volumn 109, Issue 12, 2012, Pages 4639-4644

Identification of a cis-acting element that localizes mRNA to synapses

Author keywords

FISH; RNA stem loop; RNA transport; SHAPE analysis; Synaptogenesis

Indexed keywords

CIS ACTING ELEMENT; MESSENGER RNA; NEUROTRANSMITTER; SENSORIN; UNCLASSIFIED DRUG;

EID: 84863348106     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1116269109     Document Type: Article
Times cited : (50)

References (35)
  • 1
    • 60149086205 scopus 로고    scopus 로고
    • mRNA localization: Gene expression in the spatial dimension
    • Martin KC, Ephrussi A (2009) mRNA localization: Gene expression in the spatial dimension. Cell 136:719-730.
    • (2009) Cell , vol.136 , pp. 719-730
    • Martin, K.C.1    Ephrussi, A.2
  • 2
    • 70849088746 scopus 로고    scopus 로고
    • Subcellular mRNA localization in animal cells and why it matters
    • Holt CE, Bullock SL (2009) Subcellular mRNA localization in animal cells and why it matters. Science 326:1212-1216.
    • (2009) Science , vol.326 , pp. 1212-1216
    • Holt, C.E.1    Bullock, S.L.2
  • 3
    • 0036808018 scopus 로고    scopus 로고
    • Analysis of subcellularly localized mRNAs using in situ hybridization, mRNA amplification, and expression profiling
    • DOI 10.1023/A:1020956805307
    • Eberwine J, Belt B, Kacharmina JE, Miyashiro K (2002) Analysis of subcellularly localized mRNAs using in situ hybridization, mRNA amplification, and expression profiling. Neurochem Res 27:1065-1077. (Pubitemid 35316103)
    • (2002) Neurochemical Research , vol.27 , Issue.10 , pp. 1065-1077
    • Eberwine, J.1    Belt, B.2    Kacharmina, J.E.3    Miyashiro, K.4
  • 5
    • 33845807365 scopus 로고    scopus 로고
    • Identification of process-localized mRNAs from cultured rodent hippocampal neurons
    • DOI 10.1523/JNEUROSCI.3432-06.2006
    • Poon MM, Choi SH, Jamieson CAM, Geschwind DH, Martin KC (2006) Identification of process-localized mRNAs from cultured rodent hippocampal neurons. J Neurosci 26: 13390-13399. (Pubitemid 46011650)
    • (2006) Journal of Neuroscience , vol.26 , Issue.51 , pp. 13390-13399
    • Poon, M.M.1    Choi, S.-H.2    Jamieson, C.A.M.3    Geschwind, D.H.4    Martin, K.C.5
  • 6
    • 33846168749 scopus 로고    scopus 로고
    • Characterization of mRNA species that are associated with postsynaptic density fraction by gene chip microarray analysis
    • DOI 10.1016/j.neures.2006.09.009, PII S0168010206002458
    • Suzuki T, Tian QB, Kuromitsu J, Kawai T, Endo S (2007) Characterization of mRNA species that are associated with postsynaptic density fraction by gene chip microarray analysis. Neurosci Res 57:61-85. (Pubitemid 46084867)
    • (2007) Neuroscience Research , vol.57 , Issue.1 , pp. 61-85
    • Suzuki, T.1    Tian, Q.B.2    Kuromitsu, J.3    Kawai, T.4    Endo, S.5
  • 7
    • 78449243094 scopus 로고    scopus 로고
    • Subcellular profiling reveals distinct and developmentally regulated repertoire of growth cone mRNAs
    • Zivraj KH, et al. (2010) Subcellular profiling reveals distinct and developmentally regulated repertoire of growth cone mRNAs. J Neurosci 30:15464-15478.
    • (2010) J Neurosci , vol.30 , pp. 15464-15478
    • Zivraj, K.H.1
  • 8
    • 33644584429 scopus 로고    scopus 로고
    • Dendritic mRNAs encode diversified functionalities in hippocampal pyramidal neurons
    • Zhong J, Zhang T, Bloch LM (2006) Dendritic mRNAs encode diversified functionalities in hippocampal pyramidal neurons. BMC Neurosci 7:17.
    • (2006) BMC Neurosci , vol.7 , pp. 17
    • Zhong, J.1    Zhang, T.2    Bloch, L.M.3
  • 9
    • 79959923521 scopus 로고    scopus 로고
    • G-quadruplex RNA structure as a signal for neurite mRNA targeting
    • Subramanian M, et al. (2011) G-quadruplex RNA structure as a signal for neurite mRNA targeting. EMBO Rep 12:697-704.
    • (2011) EMBO Rep , vol.12 , pp. 697-704
    • Subramanian, M.1
  • 10
    • 33748526877 scopus 로고    scopus 로고
    • Neuronal RNA Granules: Movers and Makers
    • DOI 10.1016/j.neuron.2006.08.021, PII S089662730600643X
    • Kiebler MA, Bassell GJ (2006) Neuronal RNA granules: Movers and makers. Neuron 51: 685-690. (Pubitemid 44374907)
    • (2006) Neuron , vol.51 , Issue.6 , pp. 685-690
    • Kiebler, M.A.1    Bassell, G.J.2
  • 11
    • 33746196575 scopus 로고    scopus 로고
    • mRNA transport in dendrites: RNA granules, motors, and tracks
    • Hirokawa N (2006) mRNA transport in dendrites: RNA granules, motors, and tracks. J Neurosci 26:7139-7142.
    • (2006) J Neurosci , vol.26 , pp. 7139-7142
    • Hirokawa, N.1
  • 12
    • 0035923735 scopus 로고    scopus 로고
    • Neuronal RNA granules: A link between RNA localization and stimulation-dependent translation
    • DOI 10.1016/S0896-6273(01)00508-6
    • Krichevsky AM, Kosik KS (2001) Neuronal RNA granules: A link between RNA localization and stimulation-dependent translation. Neuron 32:683-696. (Pubitemid 33145201)
    • (2001) Neuron , vol.32 , Issue.4 , pp. 683-696
    • Krichevsky, A.M.1    Kosik, K.S.2
  • 13
    • 0028893377 scopus 로고
    • mRNA distribution within dendrites: Relationship to afferent innervation
    • Steward O, Wallace CS (1995) mRNA distribution within dendrites: Relationship to afferent innervation. J Neurobiol 26:447-449.
    • (1995) J Neurobiol , vol.26 , pp. 447-449
    • Steward, O.1    Wallace, C.S.2
  • 15
    • 0031439983 scopus 로고    scopus 로고
    • Activity-dependent dendritic targeting of BDNF and TrkB mRNAs in hippocampal neurons
    • Tongiorgi E, Righi M, Cattaneo A (1997) Activity-dependent dendritic targeting of BDNF and TrkB mRNAs in hippocampal neurons. J Neurosci 17:9492-9505. (Pubitemid 28006394)
    • (1997) Journal of Neuroscience , vol.17 , Issue.24 , pp. 9492-9505
    • Tongiorgi, E.1    Righi, M.2    Cattaneo, A.3
  • 16
    • 0035036344 scopus 로고    scopus 로고
    • Selective targeting of newly synthesized Arc mRNA to active synapses requires NMDA receptor activation
    • DOI 10.1016/S0896-6273(01)00275-6
    • Steward O, Worley PF (2001) Selective targeting of newly synthesized Arc mRNA to active synapses requires NMDA receptor activation. Neuron 30:227-240. (Pubitemid 32441689)
    • (2001) Neuron , vol.30 , Issue.1 , pp. 227-240
    • Steward, O.1    Worley, P.F.2
  • 17
    • 0038345674 scopus 로고    scopus 로고
    • Bursts of high-frequency stimulation trigger rapid delivery of pre-existing alpha-CaMKII mRNA to synapses: A mechanism in dendritic protein synthesis during long-term potentiation in adult awake rats
    • DOI 10.1046/j.1460-9568.2003.02712.x
    • Håvik B, Roøkke H, Bårdsen K, Davanger S, Bramham CR (2003) Bursts of high-frequency stimulation trigger rapid delivery of pre-existing alpha-CaMKII mRNA to synapses: A mechanism in dendritic protein synthesis during long-term potentiation in adult awake rats. Eur J Neurosci 17:2679-2689. (Pubitemid 36819293)
    • (2003) European Journal of Neuroscience , vol.17 , Issue.12 , pp. 2679-2689
    • Havik, B.1    Rokke, H.2    Bardsen, K.3    Davanger, S.4    Bramham, C.R.5
  • 18
    • 80052235798 scopus 로고    scopus 로고
    • Mechanisms of dendritic mRNA transport and its role in synaptic tagging
    • Doyle M, Kiebler MA (2011) Mechanisms of dendritic mRNA transport and its role in synaptic tagging. EMBO J 30:3540-3552.
    • (2011) EMBO J , vol.30 , pp. 3540-3552
    • Doyle, M.1    Kiebler, M.A.2
  • 19
    • 31444438269 scopus 로고    scopus 로고
    • Synapse formation and mRNA localization in cultured Aplysia neurons
    • DOI 10.1016/j.neuron.2005.12.029, PII S0896627306000390
    • Lyles V, Zhao Y, Martin KC (2006) Synapse formation and mRNA localization in cultured Aplysia neurons. Neuron 49:349-356. (Pubitemid 43152237)
    • (2006) Neuron , vol.49 , Issue.3 , pp. 349-356
    • Lyles, V.1    Zhao, Y.2    Martin, K.C.3
  • 20
    • 4043060050 scopus 로고    scopus 로고
    • Serotonin regulates the secretion and autocrine action of a neuropeptide to activate MAPK required for long-term facilitation in Aplysia
    • DOI 10.1016/j.neuron.2004.07.011, PII S0896627304004337
    • Hu JY, Glickman L, Wu F, Schacher S (2004) Serotonin regulates the secretion and autocrine action of a neuropeptide to activate MAPK required for long-term facilitation in Aplysia. Neuron 43:373-385. (Pubitemid 39061129)
    • (2004) Neuron , vol.43 , Issue.3 , pp. 373-385
    • Hu, J.-Y.1    Glickman, L.2    Wu, F.3    Schacher, S.4
  • 21
    • 67649215418 scopus 로고    scopus 로고
    • Synapse- and stimulus-specific local translation during longterm neuronal plasticity
    • Wang DO, et al. (2009) Synapse- and stimulus-specific local translation during longterm neuronal plasticity. Science 324:1536-1540.
    • (2009) Science , vol.324 , pp. 1536-1540
    • Wang, D.O.1
  • 22
    • 0024745579 scopus 로고
    • Identified target motor neuron regulates neurite outgrowth and synapse formation of aplysia sensory neurons in vitro
    • Glanzman DL, Kandel ER, Schacher S (1989) Identified target motor neuron regulates neurite outgrowth and synapse formation of aplysia sensory neurons in vitro. Neuron 3:441-450.
    • (1989) Neuron , vol.3 , pp. 441-450
    • Glanzman, D.L.1    Kandel, E.R.2    Schacher, S.3
  • 23
    • 54449097862 scopus 로고    scopus 로고
    • Computational prediction of RNA structural motifs involved in posttranscriptional regulatory processes
    • Rabani M, Kertesz M, Segal E (2008) Computational prediction of RNA structural motifs involved in posttranscriptional regulatory processes. Proc Natl Acad Sci USA 105:14885-14890.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 14885-14890
    • Rabani, M.1    Kertesz, M.2    Segal, E.3
  • 24
    • 79960046667 scopus 로고    scopus 로고
    • Identifying and searching for conserved RNA localisation signals
    • Hamilton RS, Davis I (2011) Identifying and searching for conserved RNA localisation signals. Methods Mol Biol 714:447-466.
    • (2011) Methods Mol Biol , vol.714 , pp. 447-466
    • Hamilton, R.S.1    Davis, I.2
  • 25
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • Zuker M (2003) Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res 31:3406-3415.
    • (2003) Nucleic Acids Res , vol.31 , pp. 3406-3415
    • Zuker, M.1
  • 26
    • 16244412610 scopus 로고    scopus 로고
    • RNA structure analysis at single nucleotide resolution by Selective 2′-Hydroxyl Acylation and Primer Extension (SHAPE)
    • DOI 10.1021/ja043822v
    • Merino EJ, Wilkinson KA, Coughlan JL, Weeks KM (2005) RNA structure analysis at single nucleotide resolution by selective 2′-hydroxyl acylation and primer extension (SHAPE). J Am Chem Soc 127:4223-4231. (Pubitemid 40463047)
    • (2005) Journal of the American Chemical Society , vol.127 , Issue.12 , pp. 4223-4231
    • Merino, E.J.1    Wilkinson, K.A.2    Coughlan, J.L.3    Weeks, K.M.4
  • 27
    • 33947720028 scopus 로고    scopus 로고
    • Selective 2′-hydroxyl acylation analyzed by primer extension (SHAPE): Quantitative RNA structure analysis at single nucleotide resolution
    • Wilkinson KA, Merino EJ, Weeks KM (2006) Selective 2′-hydroxyl acylation analyzed by primer extension (SHAPE): Quantitative RNA structure analysis at single nucleotide resolution. Nat Protoc 1:1610-1616.
    • (2006) Nat Protoc , vol.1 , pp. 1610-1616
    • Wilkinson, K.A.1    Merino, E.J.2    Weeks, K.M.3
  • 31
    • 79551480068 scopus 로고    scopus 로고
    • Improving the accuracy of predicting secondary structure for aligned RNA sequences
    • Hamada M, Sato K, Asai K (2011) Improving the accuracy of predicting secondary structure for aligned RNA sequences. Nucleic Acids Res 39:393-402.
    • (2011) Nucleic Acids Res , vol.39 , pp. 393-402
    • Hamada, M.1    Sato, K.2    Asai, K.3
  • 32
    • 80054796108 scopus 로고    scopus 로고
    • Using the T-Coffee package to build multiple sequence alignments of protein, RNA, DNA sequences and 3D structures
    • Taly J-F, et al. (2011) Using the T-Coffee package to build multiple sequence alignments of protein, RNA, DNA sequences and 3D structures. Nat Protoc 6:1669-1682.
    • (2011) Nat Protoc , vol.6 , pp. 1669-1682
    • Taly, J.-F.1
  • 34
    • 80055112424 scopus 로고    scopus 로고
    • Preparation of Aplysia sensory-motor neuronal cell cultures
    • 10.3791/1355
    • Zhao Y, Wang DO, Martin KC (2009) Preparation of Aplysia sensory-motor neuronal cell cultures. J Vis Exp, 10.3791/1355.
    • (2009) J Vis Exp
    • Zhao, Y.1    Wang, D.O.2    Martin, K.C.3


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