-
2
-
-
33845379303
-
Atom pairs as molecular features in structure-activity studies: Definition and applications
-
Carhart RE, Smith DH, Venkataraghavan R (1985) Atom pairs as molecular features in structure-activity studies: definition and applications. J Chem Inf Comput Sci 25:64-73
-
(1985)
J Chem Inf Comput Sci
, vol.25
, pp. 64-73
-
-
Carhart, R.E.1
Smith, D.H.2
Venkataraghavan, R.3
-
4
-
-
0036740917
-
Why do we need so many chemical similarity search methods?
-
Sheridan RP, Kearsley SK (2002) Why do we need so many chemical similarity search methods? Drug Discov Today 7:903-911
-
(2002)
Drug Discov Today
, vol.7
, pp. 903-911
-
-
Sheridan, R.P.1
Kearsley, S.K.2
-
5
-
-
1042265247
-
Approaches to measure chemical similarity - A review
-
Nikolova N, Jaworska J (2003) Approaches to measure chemical similarity - a review. QSAR Comb Sci 22:1006-1026
-
(2003)
QSAR Comb Sci
, vol.22
, pp. 1006-1026
-
-
Nikolova, N.1
Jaworska, J.2
-
6
-
-
10344230435
-
Molecular similarity: A key technique in molecular informatics
-
Bender A, Glen RC (2004) Molecular similarity: a key technique in molecular informatics. Org Biomol Chem 2:3204-3218
-
(2004)
Org Biomol Chem
, vol.2
, pp. 3204-3218
-
-
Bender, A.1
Glen, R.C.2
-
7
-
-
30844443282
-
Molecular similarity and diversity in chemoinformatics: From theory to applications
-
DOI 10.1007/s11030-006-8697-1
-
Maldonado A, Doucet J, Petitjean M, Fan B-T (2006) Molecular similarity and diversity in chemoinformatics: from theory to applications. Mol Divers 10:39-79 (Pubitemid 43102376)
-
(2006)
Molecular Diversity
, vol.10
, Issue.1
, pp. 39-79
-
-
Maldonado, A.G.1
Doucet, J.P.2
Petitjean, M.3
Fan, B.-T.4
-
9
-
-
60849101543
-
Similarity-based virtual screening with a Bayesian inference network
-
Abdo A, Salim N (2009) Similarity-based virtual screening with a Bayesian inference network. ChemMedChem 4:210-218
-
(2009)
ChemMedChem
, vol.4
, pp. 210-218
-
-
Abdo, A.1
Salim, N.2
-
10
-
-
84905585942
-
Ligand-based virtual screening using Bayesian inference network
-
ACS symposium series, vol 1076. American Chemical Society
-
Abdo A, Salim N (2011) Ligand-based virtual screening using Bayesian inference network. In: Library design, search methods, and applications of fragment-based drug design, vol 1076. ACS symposium series, vol 1076. American Chemical Society, pp 57-69
-
(2011)
Library Design, Search Methods, and Applications of Fragment-based Drug Design
, vol.1076
, pp. 57-69
-
-
Abdo, A.1
Salim, N.2
-
11
-
-
79952614063
-
New fragment weighting scheme for the Bayesian inference network in ligand-based virtual screening
-
Abdo A, Salim N (2011) New fragment weighting scheme for the Bayesian inference network in ligand-based virtual screening. J Chem Inf Model 51:25-32
-
(2011)
J Chem Inf Model
, vol.51
, pp. 25-32
-
-
Abdo, A.1
Salim, N.2
-
12
-
-
76049101013
-
Bayesian inference network significantly improves the effectiveness of similarity searching using multiple 2D fingerprints and multiple reference structures
-
Abdo A, Salim N (2009) Bayesian inference network significantly improves the effectiveness of similarity searching using multiple 2D fingerprints and multiple reference structures. QSAR Comb Sci 28:1537-1545
-
(2009)
QSAR Comb Sci
, vol.28
, pp. 1537-1545
-
-
Abdo, A.1
Salim, N.2
-
13
-
-
67949095941
-
Similarity-based virtual screening using Bayesian inference network: Enhanced search using 2D fingerprints and multiple reference structures
-
Abdo A, Salim N (2009) Similarity-based virtual screening using Bayesian inference network: enhanced search using 2D fingerprints and multiple reference structures. QSAR Comb Sci 28: 654-663
-
(2009)
QSAR Comb Sci
, vol.28
, pp. 654-663
-
-
Abdo, A.1
Salim, N.2
-
14
-
-
77954043914
-
Ligand-based virtual screening using Bayesian networks
-
Abdo A, Chen B, Mueller C, Salim N, Willett P (2010) Ligand-based virtual screening using Bayesian networks. J Chem Inf Model 50:1012-1020
-
(2010)
J Chem Inf Model
, vol.50
, pp. 1012-1020
-
-
Abdo, A.1
Chen, B.2
Mueller, C.3
Salim, N.4
Willett, P.5
-
15
-
-
27544441634
-
Enhancing the effectiveness of similarity-based virtual screening using nearest-neighbor information
-
DOI 10.1021/jm050316n
-
Hert J, Willett P, Wilton DJ, Acklin P, Azzaoui K, Jacoby E, Schuffenhauer A (2005) Enhancing the effectiveness of similarity-based virtual screening using nearest-neighbor information. J Med Chem 48:7049-7054 (Pubitemid 41534671)
-
(2005)
Journal of Medicinal Chemistry
, vol.48
, Issue.22
, pp. 7049-7054
-
-
Hert, J.1
Willett, P.2
Wilton, D.J.3
Acklin, P.4
Azzaoui, K.5
Jacoby, E.6
Schuffenhauer, A.7
-
16
-
-
33646249968
-
New methods for ligand-based virtual screening: Use of data fusion and machine learning to enhance the effectiveness of similarity searching
-
Hert J, Willett P, Wilton DJ, Acklin P, Azzaoui K, Jacoby E, Schuffenhauer A (2006) New methods for ligand-based virtual screening: use of data fusion and machine learning to enhance the effectiveness of similarity searching. J Chem Inf Model 46:462-470
-
(2006)
J Chem Inf Model
, vol.46
, pp. 462-470
-
-
Hert, J.1
Willett, P.2
Wilton, D.J.3
Acklin, P.4
Azzaoui, K.5
Jacoby, E.6
Schuffenhauer, A.7
-
17
-
-
70349879097
-
Turbo similarity searching: Effect of fingerprint and dataset on virtual-screening performance
-
Gardiner EJ, Gillet VJ, Haranczyk M, Hert J, Holliday JD, Malim N, Patel Y, Willett P (2009) Turbo similarity searching: effect of fingerprint and dataset on virtual-screening performance. Stat Anal Data Mining 2:103-114
-
(2009)
Stat Anal Data Mining
, vol.2
, pp. 103-114
-
-
Gardiner, E.J.1
Gillet, V.J.2
Haranczyk, M.3
Hert, J.4
Holliday, J.D.5
Malim, N.6
Patel, Y.7
Willett, P.8
-
18
-
-
80053501637
-
Implementing relevance feedback in ligand-based virtual screening using Bayesian inference network
-
Abdo A, Salim N, Ahmed A (2011) Implementing relevance feedback in ligand-based virtual screening using Bayesian inference network. J Biomol Screen 16:1081-1088
-
(2011)
J Biomol Screen
, vol.16
, pp. 1081-1088
-
-
Abdo, A.1
Salim, N.2
Ahmed, A.3
-
19
-
-
77955920250
-
Query expansion using an immune-inspired biclustering algorithm
-
de Castro P, de França F, Ferreira H, Coelho G, Von Zuben F (2010) Query expansion using an immune-inspired biclustering algorithm. Nat Comput 9:579-602
-
(2010)
Nat Comput
, vol.9
, pp. 579-602
-
-
De Castro, P.1
De França, F.2
Ferreira, H.3
Coelho, G.4
Von Zuben, F.5
-
21
-
-
70549110128
-
Query reformulation based on relevance feedback
-
Andreasen T, Yager R, Bulskov H, Christiansen H, Larsen H (eds) Lecture notes in computer science. Springer, Berlin
-
Taktak I, Tmar M, Hamadou A (2009) Query reformulation based on relevance feedback. In: Andreasen T, Yager R, Bulskov H, Christiansen H, Larsen H (eds) Flexible query answering systems, vol 5822. Lecture notes in computer science. Springer, Berlin, pp 134-144
-
(2009)
Flexible Query Answering Systems
, vol.5822
, pp. 134-144
-
-
Taktak, I.1
Tmar, M.2
Hamadou, A.3
-
22
-
-
0003911273
-
-
Accessed October 20, 2011
-
Symyx Technologies. MDL drug data report. http://www.symyx.com/products/ databases/bioactivity/mddr/index.jsp. Accessed October 20, 2011
-
MDL Drug Data Report
-
-
-
23
-
-
33646855259
-
-
Accelrys Software Inc., San Diego
-
Pipeline Pilot (2008) Accelrys Software Inc., San Diego
-
(2008)
Pipeline Pilot
-
-
-
24
-
-
65349136650
-
Maximum unbiased validation (MUV) data sets for virtual screening based on PubChem bioactivity data
-
Rohrer SG, Baumann K (2009) Maximum unbiased validation (MUV) data sets for virtual screening based on PubChem bioactivity data. J Chem Inf Model 49:169-184
-
(2009)
J Chem Inf Model
, vol.49
, pp. 169-184
-
-
Rohrer, S.G.1
Baumann, K.2
-
26
-
-
0023890867
-
Measuring the accuracy of diagnostic systems
-
Swets J (1988) Measuring the accuracy of diagnostic systems. Science 240:1285-1293
-
(1988)
Science
, vol.240
, pp. 1285-1293
-
-
Swets, J.1
-
27
-
-
17144385534
-
Virtual screening workflow development guided by the "receiver operating characteristic" curve approach. Application to high-throughput docking on metabotropic glutamate receptor subtype 4
-
DOI 10.1021/jm049092j
-
Triballeau N, Acher F, Brabet I, Pin J-P, Bertrand H-O (2005) Virtual screening workflow development guided by the "receiver operating characteristic" curve approach. Application to high-throughput docking on metabotropic glutamate receptor subtype 4. J Med Chem 48(7):2534-2547. doi:10.1021/jm049092j (Pubitemid 40520517)
-
(2005)
Journal of Medicinal Chemistry
, vol.48
, Issue.7
, pp. 2534-2547
-
-
Triballeau, N.1
Acher, F.2
Brabet, I.3
Pin, J.-P.4
Bertrand, H.-O.5
|