Automated teniae coli detection and identification on computed tomographic colonography

Medical Physics

Volumn 39, Issue 2, 2012, Pages 964-975

  Wei, Zhuoshi ^a   Yao, Jianhua ^a   Wang, Shijun ^a   Liu, Jiamin ^a   Summers, Ronald M ^a  

^a NATIONAL INSTITUTES OF HEALTH   (United States)

Author keywords

CT colonography; Gabor filter banks; teniae coli

Indexed keywords

DIAGNOSIS; FILTER BANKS; GABOR FILTERS; MEAN SQUARE ERROR; MUSCLE;

COMPUTED TOMOGRAPHIC COLONOGRAPHY; CT COLONOGRAPHY; DETECTION AND IDENTIFICATIONS; LONGITUDINAL SMOOTH MUSCLES; MINIMALLY-INVASIVE TECHNIQUE; PROJECTION TECHNIQUES; ROOT MEAN SQUARE ERRORS; TENIAE COLI;

COMPUTERIZED TOMOGRAPHY;

EID: 84863027059     PISSN: 00942405     EISSN: None     Source Type: Journal    
DOI: 10.1118/1.3679013     Document Type: Article

References (36)

1. P. J. Pickhardt, J. R. Choi, I. Hwang, J. A. Butler, M. L. Puckett, H. A. Hildebrandt, R. K. Wong, P. A. Nugent, P. A. Mysliwiec, and W. R. Schindler, Computed tomographic virtual colonoscopy to screen for colorectal neoplasia in asymptomatic adults., N. Engl. J. Med. 349, 2191-2200 (2003). 10.1056/NEJMoa031618
2. R. M. Summers, J. Yao, P. J. Pickhardt, M. Franaszek, I. Bitter, D. Brickman, V. Krishna, and J. R. Choi, Computed tomographic virtual colonoscopy computer-aided polyp detection in a screening population., Gastroenterology 129, 1832-1844 (2005). 10.1053/j.gastro.2005.08.054
3. H. Yoshida and J. Nappi, Three-dimensional computer-aided diagnosis scheme for detection of colonic polyps., IEEE Trans. Med. Imaging 20, 1261-1274 (2001). 10.1109/42.974921
4. D. S. Paik, C. F. Beaulieu, G. D. Rubin, B. Acar, R. B. Jeffrey, J. Yee, J. Dey, and S. Napel, Surface normal overlap: A computer-aided detection algorithm, with application to colonic polyps and lung nodules in helical CT., IEEE Trans. Med. Imaging 23, 661-675 (2004). 10.1109/TMI.2004.826362
5. Z. Wang, Z. Liang, L. Li, X. Li, B. Li, J. Anderson, and D. Harrington, Reduction of false positives by internal features for polyp detection in CT-based virtual colonoscopy., Med. Phys. 32, 3602-3616 (2005). 10.1118/1.2122447
6. K. Suzuki, H. Yoshida, J. Nappi, S. G. Armato, and A. H. Dachman, Mixture of expert 3D massive-training ANNs for reduction of multiple types of false positives in CAD for detection of polyps in CT colonography., Med. Phys. 35, 694-703 (2008). 10.1118/1.2829870
7. J. G. Fletcher, C. D. Johnson, T. J. Welch, R. L. MacCarty, D. A. Ahlquist, J. E. Reed, W. S. Harmsen, and L. A. Wilson, Optimization of CT colonography technique: Prospective trial in 180 patients., Radiology 216, 704-711 (2000).
8. S. C. Chen, D. S. Lu, J. R. Hecht, and B. M. Kadell, CT colonography: Value of scanning in both the supine and prone positions., Am. J. Roentgenol. 172, 595-599 (1999).
9. K. M. Horton, F. M. Corl, and E. K. Fisman, CT Evaluation of the Colon: Inflammatory Disease., RadioGraphics 20, 399-418 (2000).
10. S. Standring, Gray's Anatomy: The Anatomical Basis of Clinical Practice (Elsevier Churchill, Livingstone, 2005).
11. W. Zeng, J. Marino, X. Gu, and A. Kaufman, Conformal geometry based supine and prone colon registration., Medical Image Computing and Computer-Assisted Intervention (MICCAI) Virtual Colonoscopy Workshop (Springer-Verlag Berlin Heidelberg, Beijing, China, 2010), pp. 149-154.
12. W. Zeng, J. Marino, K. C. Gurijala, X. Gu, and A. Kaufman, Supine and prone colon registration using quasi-conformal mapping., IEEE Trans. Vis. Comput. Graph. 16, 1348-1357 (2010). 10.1109/TVCG.2010.200
13. A. Huang, D. A. Roy, R. M. Summers, M. Franaszek, N. Petrick, J. R. Choi, and P. J. Pickhardt, Teniae coli-based circumferential localization system for CT colonography: Feasibility study., Radiology 243, 551-560 (2007). 10.1148/radiol.2432060353
14. A. Huang, D. Roy, M. Franaszek, and R. M. Summers, Teniae coli guided navigation and registration for virtual colonoscopy., Proceedings of the IEEE Visualization Conference (IEEE, Minneapolis, MN, 2005), pp. 279-285.
15. J. Lamy and R. M. Summers, Teniae coli detection from colon surface: Extraction of anatomical markers for virtual colonosopy., International Symposium on Visual Computing (Springer, Lake Tahoe, NV, 2007), Vol. 1, pp. 199-207.
16. A. S. Chowdhury, J. Yao, R. L. VanUitert, M. G. Linguraru, and R. M. Summers, Detection of anatomical landmarks in human colon from computed tomographic colonography images., International Conference on Pattern Recognition (2008).
17. Y. Umemoto, M. Oda, T. Kitasaka, K. Mori, Y. Hayashi, Y. Suenaga, T. Takayama, and H. Natori, Extraction of teniae coli from CT volumes for assisting virtual colonoscopy., Proceedings of SPIE Medical Imging (San Diego, CA, 2008), Vol. 6916.
18. R. M. Summers, M. Franaszek, M. T. Miller, P. J. Pickhardt, J. R. Choi, and W. R. Schindler, Computer-aided detection of polyps on oral contrast-enhanced CT colonography., Am. J. Roentgenol. 184, 105-108 (2005).
19. G. Iordanescu, P. J. Pickhardt, J. R. Choi, and R. M. Summers, Automated seed placement for colon segmentation in computed tomography colonography., Acad. Radiol. 12, 182-190 (2005). 10.1016/j.acra.2004.11.013
20. M. Franaszek, R. M. Summers, P. J. Pickhardt, and J. R. Choi, Hybrid segmentation of colon filled with air and opacified fluid for CT colonography., IEEE Trans. Med. Imaging 25, 358-368 (2006). 10.1109/TMI.2005.863836
21. R. M. Summers, C. F. Beaulieu, L. M. Pusanik, J. D. Malley, R. B. Jeffrey, Jr., D. I. Glazer, and S. Napel, Automated polyp detector for CT colonography: Feasibility study., Radiology 216, 284-290 (2000).
22. R. M. Summers, C. D. Johnson, L. M. Pusanik, J. D. Malley, A. M. Youssef, and J. E. Reed, Automated polyp detection at CT colonography: Feasibility assessment in a human population., Radiology 219, 51-59 (2001).
23. J. Yao, A. S. Chowdhury, J. Aman, and R. M. Summers, Reversible Projection Technique for Colon Unfolding., IEEE Trans. Biomed. Eng. 57, 2861-2869 (2010). 10.1109/TBME.2010.2052255
24. D. E. Beck, P. L. Roberts, T. J. Saclarides, A. J. Senagore, M. J. Stamos, and S. D. Wexner, The ASCRS Textbook of Colon and Rectal Surgery (Springer, New York, 2011).
25. W. Kahle and H. Leonhardt, Color Atlas and Textbook of Human Anatomy: Internal Organs (Thieme Medical Publishers, New York, NY, 2008).
26. J. Daugman, Two-dimensional spectral analysis of cortical receptive field profiles., Vision Res. 20, 847-856 (1980). 10.1016/0042-6989(80)90065-6
27. J. Daugman, Uncertainty relation for resolution in space, spatial frequency and orientation optimized by two-dimensional visual cortical filters., J. Opt. Soc. Am. 2, 1160-1169 (1985). 10.1364/JOSAA.2.001160
28. J. Malik and P. Perona, Preattentive texture discrimination with early vision Mechanisms., J. Opt. Soc. Am. 7, 923-932 (1990). 10.1364/JOSAA.7.000923
29. H. Roth, J. McClelland, M. Modat, D. Boone, M. Hu, S. Ourselin, G. Slabaugh, S. Slabaugh, and D. Hawkes, Establishing spatial correspondence between the inner colon surfaces from prone and supine CT colonography., in Medical Image Computing and Computer-Assisted Intervention (MICCAI), Vol. 13 (2010), pp. 497-504.
30. R. M. Summers, J. Yao, and C. D. Johnson, CT colonography with computer-aided detection: Automated recognition of ileocecal valve to reduce number of false-positive detections., Radiology 233, 266-272 (2004).
31. S. D. O'Connor, R. M. Summers, J. Yao, P. J. Pickhardt, and J. R. Choi, CT colonography with computer-aided polyp detection: Volume and attenuation thresholds to reduce false-positive findings owing to the ileocecal valve., Radiology 241, 426-432 (2006). 10.1148/radiol.2412051223
32. J. Lamy, and R. M. Summers, Intra-patient colon surface registration based on teniae coli., in Proceedings of SPIE Medical Imaging (San Diego, CA, 2007), Vol. 6514.
33. P. Li, S. Napel, B. Acar, D. S. Paik, R. B. Jeffrey, Jr., and C. F. Beaulieu, Registration of central paths and colonic polyps between supine and prone scans in computed tomography colonography: Pilot study., Med. Phys. 31, 2912-2923 (2004). 10.1118/1.1796171
34. J. W. Suh and C. L. Wyatt, Deformable registration of supine and prone colons for computed tomographic colonography., J. Comput. Assist. Tomo. 33, 902-911 (2009). 10.1097/RCT.0b013e3181a7e2c1
35. S. Wang, J. Yao, J. Liu, N. Petrick, R. L. Van Uitert, S. Periaswamy, and R. M. Summers, Registration of prone and supine CT colonography scans using correlation optimized warping and canonical correlation analysis., Med. Phys. 36, 5595-5603 (2009). 10.1118/1.3259727
36. S. Wang, N. Petrick, R.L. Van Uitert, S. Periaswamy, and R. M. Summers, 3D supine and prone colon registration for computed tomographic colonography scans based on graph matching., in Proceedings of SPIE Medical Imaging (Orlando, FL, 2011), Vol. 7963.