-
1
-
-
34547499110
-
The design and characterization of two proteins with 88% sequence identity but different structure and function
-
DOI 10.1073/pnas.0700922104
-
P.A. Alexander, Y. He, Y. Chen, J. Orban, and P.N. Bryan The design and characterization of two proteins with 88% sequence identity but different structure and function Proc. Natl. Acad. Sci. USA 104 2007 11963 11968 (Pubitemid 47185613)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.29
, pp. 11963-11968
-
-
Alexander, P.A.1
He, Y.2
Chen, Y.3
Orban, J.4
Bryan, P.N.5
-
2
-
-
75849116590
-
A minimal sequence code for switching protein structure and function
-
P.A. Alexander, Y. He, Y. Chen, J. Orban, and P.N. Bryan A minimal sequence code for switching protein structure and function Proc. Natl. Acad. Sci. USA 106 2009 21149 21154
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 21149-21154
-
-
Alexander, P.A.1
He, Y.2
Chen, Y.3
Orban, J.4
Bryan, P.N.5
-
3
-
-
33746635140
-
Design of protein conformational switches
-
DOI 10.1016/j.sbi.2006.05.014, PII S0959440X06000984
-
X.I. Ambroggio, and B. Kuhlman Design of protein conformational switches Curr. Opin. Struct. Biol. 16 2006 525 530 (Pubitemid 44149060)
-
(2006)
Current Opinion in Structural Biology
, vol.16
, Issue.4
, pp. 525-530
-
-
Ambroggio, X.I.1
Kuhlman, B.2
-
4
-
-
58749087873
-
Functional specialization of transcription elongation factors
-
G.A. Belogurov, R.A. Mooney, V. Svetlov, R. Landick, and I. Artsimovitch Functional specialization of transcription elongation factors EMBO J. 28 2009 112 122
-
(2009)
EMBO J.
, vol.28
, pp. 112-122
-
-
Belogurov, G.A.1
Mooney, R.A.2
Svetlov, V.3
Landick, R.4
Artsimovitch, I.5
-
5
-
-
0033555717
-
Exploring the conformational properties of the sequence space between two proteins with different folds: An experimental study
-
DOI 10.1006/jmbi.1998.2333
-
F.J. Blanco, I. Angrand, and L. Serrano Exploring the conformational properties of the sequence space between two proteins with different folds: an experimental study J. Mol. Biol. 285 1999 741 753 (Pubitemid 29041805)
-
(1999)
Journal of Molecular Biology
, vol.285
, Issue.2
, pp. 741-753
-
-
Blanco, F.J.1
Angrand, I.2
Serrano, L.3
-
6
-
-
3543012707
-
Crystallography & NMR system: A new software suite for macromolecular structure determination
-
A.T. Brünger, P.D. Adams, G.M. Clore, W.L. DeLano, P. Gros, R.W. Grosse-Kunstleve, J.S. Jiang, J. Kuszewski, M. Nilges, and N.S. Pannu Crystallography & NMR system: A new software suite for macromolecular structure determination Acta Crystallogr. D Biol. Crystallogr. 54 1998 905 921
-
(1998)
Acta Crystallogr. D Biol. Crystallogr.
, vol.54
, pp. 905-921
-
-
Brünger, A.T.1
Adams, P.D.2
Clore, G.M.3
Delano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
-
8
-
-
77949325250
-
Computational exploration of the network of sequence flow between protein structures
-
B. Cao, and R. Elber Computational exploration of the network of sequence flow between protein structures Proteins 78 2010 985 1003
-
(2010)
Proteins
, vol.78
, pp. 985-1003
-
-
Cao, B.1
Elber, R.2
-
9
-
-
0033003335
-
Protein backbone angle restraints from searching a database for chemical shift and sequence homology
-
DOI 10.1023/A:1008392405740
-
G. Cornilescu, F. Delaglio, and A. Bax Protein backbone angle restraints from searching a database for chemical shift and sequence homology J. Biomol. NMR 13 1999 289 302 (Pubitemid 29143535)
-
(1999)
Journal of Biomolecular NMR
, vol.13
, Issue.3
, pp. 289-302
-
-
Cornilescu, G.1
Delaglio, F.2
Bax, A.3
-
10
-
-
0033815822
-
Understanding the sequence determinants of conformational switching using protein design
-
S. Dalal, and L. Regan Understanding the sequence determinants of conformational switching using protein design Protein Sci. 9 2000 1651 1659
-
(2000)
Protein Sci.
, vol.9
, pp. 1651-1659
-
-
Dalal, S.1
Regan, L.2
-
11
-
-
0029400480
-
NMRPipe: A multidimensional spectral processing system based on UNIX pipes
-
F. Delaglio, S. Grzesiek, G.W. Vuister, G. Zhu, J. Pfeifer, and A. Bax NMRPipe: a multidimensional spectral processing system based on UNIX pipes J. Biomol. NMR 6 1995 277 293
-
(1995)
J. Biomol. NMR
, vol.6
, pp. 277-293
-
-
Delaglio, F.1
Grzesiek, S.2
Vuister, G.W.3
Zhu, G.4
Pfeifer, J.5
Bax, A.6
-
13
-
-
0022545967
-
Gene for an immunoglobulin-binding protein from a group G streptococcus
-
S.R. Fahnestock, P. Alexander, J. Nagle, and D. Filpula Gene for an immunoglobulin-binding protein from a group G streptococcus J. Bacteriol. 167 1986 870 880 (Pubitemid 16045020)
-
(1986)
Journal of Bacteriology
, vol.167
, Issue.3
, pp. 870-880
-
-
Fahnestock, S.R.1
Alexander, P.2
Nagle, J.3
Filpula, D.4
-
14
-
-
0026509529
-
Localization of the binding site for streptococcal protein G on human serum albumin. Identification of a 5.5-kilodalton protein G binding albumin fragment
-
C. Falkenberg, L. Björck, and B. Akerström Localization of the binding site for streptococcal protein G on human serum albumin. Identification of a 5.5-kilodalton protein G binding albumin fragment Biochemistry 31 1992 1451 1457
-
(1992)
Biochemistry
, vol.31
, pp. 1451-1457
-
-
Falkenberg, C.1
Björck, L.2
Akerström, B.3
-
15
-
-
0028354429
-
Two crystal structures of the B1 immunoglobulin-binding domain of streptococcal protein G and comparison with NMR
-
T.D. Gallagher, P. Alexander, P. Bryan, and G.L. Gilliland Two crystal structures of the B1 immunoglobulin-binding domain of streptococcal protein G and comparison with NMR Biochemistry 33 1994 4721 4729 (Pubitemid 24145123)
-
(1994)
Biochemistry
, vol.33
, Issue.15
, pp. 4721-4729
-
-
Gallagher, T.1
Alexander, P.2
Bryan, P.3
Gilliland, G.L.4
-
17
-
-
0025769350
-
A novel, highly stable fold of the immunoglobulin binding domain of streptococcal protein G
-
A.M. Gronenborn, D.R. Filpula, N.Z. Essig, A. Achari, M. Whitlow, P.T. Wingfield, and G.M. Clore A novel, highly stable fold of the immunoglobulin binding domain of streptococcal protein G Science 253 1991 657 661 (Pubitemid 21917198)
-
(1991)
Science
, vol.253
, Issue.5020
, pp. 657-661
-
-
Gronenborn, A.M.1
Filpula, D.R.2
Essig, N.Z.3
Achari, A.4
Whitlow, M.5
Wingfield, P.T.6
Clore, G.M.7
-
18
-
-
33747517633
-
Structure, dynamics, and stability variation in bacterial albumin binding modules: Implications for species specificity
-
DOI 10.1021/bi060409m
-
Y. He, D.A. Rozak, N. Sari, Y. Chen, P. Bryan, and J. Orban Structure, dynamics, and stability variation in bacterial albumin binding modules: implications for species specificity Biochemistry 45 2006 10102 10109 (Pubitemid 44257404)
-
(2006)
Biochemistry
, vol.45
, Issue.33
, pp. 10102-10109
-
-
He, Y.1
Rozak, D.A.2
Sari, N.3
Chen, Y.4
Bryan, P.5
Orban, J.6
-
19
-
-
34250823049
-
An artificially evolved albumin binding module facilitates chemical shift epitope mapping of GA domain interactions with phylogenetically diverse albumins
-
DOI 10.1110/ps.072799507
-
Y. He, Y. Chen, D.A. Rozak, P.N. Bryan, and J. Orban An artificially evolved albumin binding module facilitates chemical shift epitope mapping of GA domain interactions with phylogenetically diverse albumins Protein Sci. 16 2007 1490 1494 (Pubitemid 46984883)
-
(2007)
Protein Science
, vol.16
, Issue.7
, pp. 1490-1494
-
-
He, Y.1
Chen, Y.2
Rozak, D.A.3
Bryan, P.N.4
Orban, J.5
-
20
-
-
55749108537
-
NMR structures of two designed proteins with high sequence identity but different fold and function
-
Y. He, Y. Chen, P. Alexander, P.N. Bryan, and J. Orban NMR structures of two designed proteins with high sequence identity but different fold and function Proc. Natl. Acad. Sci. USA 105 2008 14412 14417
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 14412-14417
-
-
He, Y.1
Chen, Y.2
Alexander, P.3
Bryan, P.N.4
Orban, J.5
-
21
-
-
0031567139
-
Solution structure of the albumin-binding GA module: A versatile bacterial protein domain
-
DOI 10.1006/jmbi.1996.0856
-
M.U. Johansson, M. de Château, M. Wikström, S. Forsén, T. Drakenberg, and L. Björck Solution structure of the albumin-binding GA module: a versatile bacterial protein domain J. Mol. Biol. 266 1997 859 865 (Pubitemid 27122593)
-
(1997)
Journal of Molecular Biology
, vol.266
, Issue.5
, pp. 859-865
-
-
Johansson, M.U.1
De Chateau, M.2
Wikstrom, M.3
Forsen, S.4
Drakenberg, T.5
Bjorck, L.6
-
22
-
-
0029881007
-
MOLMOL: A program for display and analysis of macromolecular structures
-
DOI 10.1016/0263-7855(96)00009-4
-
R. Koradi, M. Billeter, and K. Wüthrich MOLMOL: a program for display and analysis of macromolecular structures J. Mol. Graph. 14 1996 51 55 29-32 (Pubitemid 26152976)
-
(1996)
Journal of Molecular Graphics
, vol.14
, Issue.1
, pp. 51-55
-
-
Koradi, R.1
Billeter, M.2
Wuthrich, K.3
-
23
-
-
0030339738
-
AQUA and PROCHECK-NMR: Programs for checking the quality of protein structures solved by NMR
-
R.A. Laskowski, J.A. Rullmannn, M.W. MacArthur, R. Kaptein, and J.M. Thornton AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR J. Biomol. NMR 8 1996 477 486 (Pubitemid 126706801)
-
(1996)
Journal of Biomolecular NMR
, vol.8
, Issue.4
, pp. 477-486
-
-
Laskowski, R.A.1
Rullmann, J.A.C.2
MacArthur, M.W.3
Kaptein, R.4
Thornton, J.M.5
-
24
-
-
5644272668
-
Crystal structure and biological implications of a bacterial albumin binding module in complex with human serum albumin
-
DOI 10.1074/jbc.M406957200
-
S. Lejon, I.M. Frick, L. Björck, M. Wikström, and S. Svensson Crystal structure and biological implications of a bacterial albumin binding module in complex with human serum albumin J. Biol. Chem. 279 2004 42924 42928 (Pubitemid 39372183)
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.41
, pp. 42924-42928
-
-
Lejon, S.1
Frick, I.-M.2
Bjorck, L.3
Wikstrom, M.4
Svensson, S.5
-
25
-
-
10744228816
-
The Intracellular Chloride Ion Channel Protein CLIC1 Undergoes a Redox-controlled Structural Transition
-
DOI 10.1074/jbc.M308444200
-
D.R. Littler, S.J. Harrop, W.D. Fairlie, L.J. Brown, G.J. Pankhurst, S. Pankhurst, M.Z. DeMaere, T.J. Campbell, A.R. Bauskin, and R. Tonini The intracellular chloride ion channel protein CLIC1 undergoes a redox-controlled structural transition J. Biol. Chem. 279 2004 9298 9305 (Pubitemid 38295993)
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.10
, pp. 9298-9305
-
-
Littler, D.R.1
Harrop, S.J.2
Fairlie, W.D.3
Brown, L.J.4
Pankhurst, G.J.5
Pankhurst, S.6
DeMaere, M.Z.7
Campbell, T.J.8
Bauskin, A.R.9
Tonini, R.10
Mazzanti, M.11
Breit, S.N.12
Curmi, P.M.G.13
-
26
-
-
55249120526
-
Protein metamorphosis: The two-state behavior of Mad2
-
X. Luo, and H. Yu Protein metamorphosis: the two-state behavior of Mad2 Structure 16 2008 1616 1625
-
(2008)
Structure
, vol.16
, pp. 1616-1625
-
-
Luo, X.1
Yu, H.2
-
27
-
-
36549050792
-
MAD contortions: conformational dimerization boosts spindle checkpoint signaling
-
DOI 10.1016/j.sbi.2007.08.011, PII S0959440X07001182, Catalysis and Regulation /Protein
-
M. Mapelli, and A. Musacchio MAD contortions: conformational dimerization boosts spindle checkpoint signaling Curr. Opin. Struct. Biol. 17 2007 716 725 (Pubitemid 350186099)
-
(2007)
Current Opinion in Structural Biology
, vol.17
, Issue.6
, pp. 716-725
-
-
Mapelli, M.1
Musacchio, A.2
-
29
-
-
46649088364
-
Biochemistry. Metamorphic proteins
-
A.G. Murzin Biochemistry. Metamorphic proteins Science 320 2008 1725 1726
-
(2008)
Science
, vol.320
, pp. 1725-1726
-
-
Murzin, A.G.1
-
30
-
-
0017694053
-
Heterogeneity of nonimmune immunoglobulin Fc reactivity among gram-positive cocci: description of three major types of receptors for human immunoglobulin G
-
E.B. Myhre, and G. Kronvall Heterogeneity of nonimmune immunoglobulin Fc reactivity among gram-positive cocci: description of three major types of receptors for human immunoglobulin G Infect. Immun. 17 1977 475 482 (Pubitemid 8184171)
-
(1977)
Infection and Immunity
, vol.17
, Issue.3
, pp. 475-482
-
-
Myhre, E.B.1
Kronvall, G.2
-
31
-
-
40649108103
-
Transitive homology-guided structural studies lead to discovery of Cro proteins with 40% sequence identity but different folds
-
DOI 10.1073/pnas.0711589105
-
C.G. Roessler, B.M. Hall, W.J. Anderson, W.M. Ingram, S.A. Roberts, W.R. Montfort, and M.H. Cordes Transitive homology-guided structural studies lead to discovery of Cro proteins with 40% sequence identity but different folds Proc. Natl. Acad. Sci. USA 105 2008 2343 2348 (Pubitemid 351520515)
-
(2008)
Proceedings of the National Academy of Sciences of the United States of America
, vol.105
, Issue.7
, pp. 2343-2348
-
-
Roessler, C.G.1
Hall, B.M.2
Anderson, W.J.3
Ingram, W.M.4
Roberts, S.A.5
Montfort, W.R.6
Cordes, M.H.J.7
-
33
-
-
8744294716
-
Engineering subtilisin into a fluoride-triggered processing protease useful for one-step protein purification
-
DOI 10.1021/bi048177j
-
B. Ruan, K.E. Fisher, P.A. Alexander, V. Doroshko, and P.N. Bryan Engineering subtilisin into a fluoride-triggered processing protease useful for one-step protein purification Biochemistry 43 2004 14539 14546 (Pubitemid 39524929)
-
(2004)
Biochemistry
, vol.43
, Issue.46
, pp. 14539-14546
-
-
Ruan, B.1
Fisher, K.E.2
Alexander, P.A.3
Doroshko, V.4
Bryan, P.N.5
-
34
-
-
0029644247
-
Crystal structure of the C2 fragment of streptococcal protein G in complex with the Fc domain of human IgG
-
A.E. Sauer-Eriksson, G.J. Kleywegt, M. Uhlén, and T.A. Jones Crystal structure of the C2 fragment of streptococcal protein G in complex with the Fc domain of human IgG Structure 3 1995 265 278
-
(1995)
Structure
, vol.3
, pp. 265-278
-
-
Sauer-Eriksson, A.E.1
Kleywegt, G.J.2
Uhlén, M.3
Jones, T.A.4
-
35
-
-
42449146665
-
Consistent blind protein structure generation from NMR chemical shift data
-
DOI 10.1073/pnas.0800256105
-
Y. Shen, O. Lange, F. Delaglio, P. Rossi, J.M. Aramini, G. Liu, A. Eletsky, Y. Wu, K.K. Singarapu, and A. Lemak Consistent blind protein structure generation from NMR chemical shift data Proc. Natl. Acad. Sci. USA 105 2008 4685 4690 (Pubitemid 351753807)
-
(2008)
Proceedings of the National Academy of Sciences of the United States of America
, vol.105
, Issue.12
, pp. 4685-4690
-
-
Shen, Y.1
Lange, O.2
Delaglio, F.3
Rossi, P.4
Aramini, J.M.5
Liu, G.6
Eletsky, A.7
Wu, Y.8
Singarapu, K.K.9
Lemak, A.10
Ignatchenko, A.11
Arrowsmith, C.H.12
Szyperski, T.13
Montelione, G.T.14
Baker, D.15
Bax, A.16
-
36
-
-
76749107198
-
De novo structure generation using chemical shifts for proteins with high-sequence identity but different folds
-
Y. Shen, P.N. Bryan, Y. He, J. Orban, D. Baker, and A. Bax De novo structure generation using chemical shifts for proteins with high-sequence identity but different folds Protein Sci. 19 2010 349 356
-
(2010)
Protein Sci.
, vol.19
, pp. 349-356
-
-
Shen, Y.1
Bryan, P.N.2
He, Y.3
Orban, J.4
Baker, D.5
Bax, A.6
-
37
-
-
42449084477
-
Interconversion between two unrelated protein folds in the lymphotactin native state
-
DOI 10.1073/pnas.0709518105
-
R.L. Tuinstra, F.C. Peterson, S. Kutlesa, E.S. Elgin, M.A. Kron, and B.F. Volkman Interconversion between two unrelated protein folds in the lymphotactin native state Proc. Natl. Acad. Sci. USA 105 2008 5057 5062 (Pubitemid 351738509)
-
(2008)
Proceedings of the National Academy of Sciences of the United States of America
, vol.105
, Issue.13
, pp. 5057-5062
-
-
Tuinstra, R.L.1
Peterson, F.C.2
Kutlesa, S.3
Elgin, E.S.4
Kron, M.A.5
Volkman, B.F.6
-
38
-
-
22744435641
-
Birth of a prion: Spontaneous generation revisited
-
DOI 10.1016/j.cell.2005.07.001, PII S0092867405006598
-
C. Weissmann Birth of a prion: spontaneous generation revisited Cell 122 2005 165 168 (Pubitemid 41032981)
-
(2005)
Cell
, vol.122
, Issue.2
, pp. 165-168
-
-
Weissmann, C.1
|