Foliar pathogens of Populus angustifolia are consistent with a hypothesis of Beringian migration into North America

Fungal Biology

Volumn 116, Issue 7, 2012, Pages 792-801

  Busby, Posy E ^a   Catherine Aime, M ^b   Newcombe, George ^c  

^a STANFORD UNIVERSITY   (United States)

^b LOUISIANA STATE UNIVERSITY AGRICULTURAL CENTER   (United States)

^c UNIVERSITY OF IDAHO   (United States)

Author keywords

Fungal biogeography; Mycosphaerellaceae; Populus trichocarpa; Pucciniales; Salicaceae

Indexed keywords

FUNGAL DNA;

BERINGIA; DECIDUOUS TREE; HOST-PATHOGEN INTERACTION; HYBRIDIZATION; NATIVE SPECIES; PHYLOGENETICS; PHYLOGENY; PHYLOGEOGRAPHY;

ARTICLE; ASIA; CHEMISTRY; CLASSIFICATION; DNA SEQUENCE; FUNGUS; GENETICS; MICROBIOLOGY; MOLECULAR GENETICS; NORTH AMERICA; NUCLEOTIDE SEQUENCE; PATHOGENICITY; PHYLOGEOGRAPHY; PLANT DISEASE; PLANT LEAF; POPULUS;

ASIA; DNA, FUNGAL; FUNGI; MOLECULAR SEQUENCE DATA; NORTH AMERICA; PHYLOGEOGRAPHY; PLANT DISEASES; PLANT LEAVES; POPULUS; SEQUENCE ANALYSIS, DNA;

NORTH AMERICA;

DREPANOPEZIZA; MYCOSPHAERELLA; MYCOSPHAERELLA POPULICOLA; MYCOSPHAERELLA POPULORUM; MYCOSPHAERELLACEAE; PHYLLACTINIA; POPULUS; POPULUS ANGUSTIFOLIA; POPULUS TRICHOCARPA; SALICACEAE; TACAMAHACA;

EID: 84862991426     PISSN: 18786146     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.funbio.2012.04.012     Document Type: Article

References (40)

1. Ager T.A. Late Quaternary vegetation and climate history of the central Bering land bridge from St. Michael Island, western Alaska. Quaternary Research 2003, 60:19-32.
2. Aime M.C. Toward resolving family-level relationships in rust fungi (Uredinales). Mycoscience 2006, 47:112-122.
3. Braun U., Takamatsu S. Phylogeny of Erysiphe, Microsphaera, Uncinula (Erysipheae) and Cystotheca, Podosphaera, Sphaerotheca (Cystotheceae) inferred from rDNA ITS sequences - some taxonomic consequences. Schlechtendalia 2000, 4:1-33.
4. Braatne J.H., Rood S.B., Heilman P.E. Life history, ecology, and conservation of riparian cottonwoods in North America pp. 57-85. Biology of Populus and its implications for management and conservation 1996, NRC Research Press, Ottawa, Canada. R.F. Stettler, H.D. Bradshaw, P.E. Heilman, T.M. Hinckley (Eds.).
5. Bennett C., Aime M.C., Newcombe G. Molecular and pathogenic variation within Melampsora on Salix in western North America reveal numerous cryptic species. Mycologia 2011, 103:1004-1018.
6. Brubaker L.B., Anderson P.M., Edwards M.E., Lozhkin A.V. Beringia as a glacial refugium for boreal trees and shrubs: new perspectives from mapped pollen data. Journal of Biogeography 2005, 32:833-848.
7. Cervera M.T., Storme V., Soto A., Ivens B., Van Montagu M., Rajora O.P., Boerjan W. Intraspecific and interspecific genetic and phylogenetic relationships in the genus Populus based on AFLP markers. Theoretical and Applied Genetics 2005, 111:1440-1456.
8. Criscione C.D., Cooper B., Blouin M.S. Parasite genotypes identify source populations of migratory fish more accurately than fish genotypes. Ecology 2006, 87:823-828.
9. Eckenwalder J.E. Systematics and Evolution of Populus. Part I, Chapter 1. Biology of Populus and its Implications for Management and Conservation 1996, pp. 7-32, NRC Research Press, National Research Council of Canada, Ottawa, ON. H.D.B.R.F. Stettler, P.E. Heilman, T.M. Hinckley (Eds.).
10. Eckenwalder J.E. Populus 2010, vol. 7. Flora of North America North of Mexico, 5-23.
11. Edwards M.E., Brubaker L.B., Lozhkin A.V., Anderson P.M. Structurally novel biomes: a response to past warming in Beringia. Ecology 2005, 86:1696-1703.
12. Farr D.F., Rossman A.Y. Fungal Databases, Systematic Mycology and Microbiology Laboratory, ARS, USDA Retrieved April 25, 2012, from. http://nt.ars-grin.gov/fungaldatabases/.
13. Feau N., Hamelin R.C., Bernier L. Attributes and congruence of three molecular data sets: inferring phylogenies among Septoria-related species from woody perennial plants. Molecular Phylogenetics and Evolution 2006, 40:808-829.
14. Floate K.D., Whitham T.G. The ''hybrid bridge'' hypothesis: host shifting via plant hybrid swarms. American Naturalist 1993, 141:651-662.
15. Gardes M.T., Bruns D. ITS primers with enhanced specificity for basidiomycetes - application to the identification of mycorrhizae and rusts. Molecular Ecology 1993, 2:113-118.
16. Graham A. Late Cretaceous and Cenozoic History of North American Vegetation 1999, p. 350, Oxford University Press, New York Oxford.
17. Guindon S., Dufayard J.F., Lefort V., Anisimova M., Hordijk W., Gascuel O. New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Systematic Biology 2010, 59:307-321.
18. Hamzeh M., Dayanandan S. Phylogeny of Populus (Salicaceae) based on nucleotide sequences of chloroplast trnT-trnF region and nuclear rDNA. American Journal of Botany 2004, 91:1398-1408.
19. Hulten E. Flora of the Aleutian Islands and Westernmost Alaska Peninsula With Notes on the Flora of Commander Islands 1937, Bokförlags aktiebolaget Thule, Stockholm, Sweden.
20. Huelsenbeck J.P., Ronquist F. MRBAYES. Bayesian inference of phylogeny. Bioinformatics 2001, 17:754-755.
21. Liston A., Parker-Defeniks M., Syring J.V., Willyard A., Cronn R. Interspecific phylogenetic analysis enhances intraspecific phylogeographical inference: a case study in Pinus lambertiana. Molecular Ecology 2007, 16:3926-3937.
22. Little Jr EL, 1976. Atlas of United States trees, Minor Western hardwoods, U.S. Department of Agriculture Miscellaneous Publication, 1314, vol. 3, p. 13, 290 maps.
23. Lo E.Y.Y., Stefanovi S., Christensen K.I., Dickinson T.A. Evidence for genetic association between East Asian and western North American Crataegus L. (Rosaceae) and rapid divergence of the eastern North American lineages based on multiple DNA sequences. Molecular Phylogenetics and Evolution 2009, 51:157-168.
24. Martinsen G.D., Whitham T.G., Turek R.J., Keim P. Hybrid populations selectively filter gene introgression between species. Evolution 2001, 55:1325-1335.
25. Newcombe G. The Specificity of Fungal Pathogens of Populus. Biology of Populus and its Implications for Management and Conservation 1996, pp. 223-246, NRC Research Press, National Research Council of Canada, Ottawa. R.F. Stettler, H.D. Bradshaw, P.E. Heilman, T.M. Hinckley (Eds.).
26. Newcombe G. A review of exapted resistance to diseases of Populus. European Journal of Forest Pathology 1998, 28:209-216.
27. Newcombe G. Native Venturia inopina sp. nov., specific to Populus trichocarpa and its hybrids. Mycological Research 2003, 107:108-116.
28. Newcombe G. Genes for parasite-specific, nonhost resistance in Populus. Phytopathology 2005, 95:779-783.
29. Newcombe G., Bradshaw H.D. Quantitative trait loci conferring resistance in hybrid poplar to Septoria populicola, the cause of leaf spot. Canadian Journal of Forest Research 1996, 26:1943-1950.
30. Newcombe G., Stirling B., Bradshaw H.D. Abundant pathogenic variation in the new hybrid rust Melampsora × columbiana on hybrid poplar. Phytopathology 2001, 91:981-985.
31. Newcombe G., Stirling B., McDonald S., Bradshaw H.D. Melampsora × columbiana, a natural hybrid of M. medusae and M. occidentalis. Mycological Research 2000, 104:261-274.
32. Ramaley A.W. Clypeispora and its Mycosphaerella teleomorph. Mycotaxon (USA) 1991, 40:13-22.
33. Spiers A. Comparative studies of host specificity and symptoms exhibited by poplars infected with Marssonina brunnea, Marssonina castagnei and Marssonina populi. European Journal of Forest Pathology 1984, 14:202-218.
34. Swofford D.L. PAUP. Phylogenetic Analysis Using Parsimony (and Other Methods) 2002, Sinauer Associates, Sunderland, Massachusetts.
35. Thompson G.E. Leaf-spot diseases of poplars caused by Septoria musiva and S. populicola. Phytopathology 1941, 31:241-254.
36. Thompson A.R., Thacker C.E., Shaw E.Y. Phylogeography of marine mutualists: parallel patterns of genetic structure between obligate goby and shrimp partners. Molecular Ecology 2005, 14:3557-3572.
37. White T.J., Bruns T., Lee S., Taylor J. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR Protocols: a guide to methods and applications 1990, 315-322. Academic Press, New York, USA. M.A. Innis, D.H. Gelfand, J.J. Sninsky, T.J. White (Eds.).
38. Whitham T.G., Bailey J.K., Schweitzer J.A., Shuster S.M., Bangert R.K., LeRoy C.J., Lonsdorf E., Allan G.J., DiFazio S.P., Potts B.M., Fischer D.G., Gehring C.A., Lindroth R.L., Marks J., Hart S.C., Wimp G.M., Wooley S.C. A framework for community and ecosystem genetics: from genes to ecosystems. Nature Reviews Genetics 2006, 7:510-523.
39. Whitham T.G., Martinsen G.D., Keim P., Floate K.D., Dungey H.S., Potts B.M. Plant hybrid zones affect biodiversity: tools for a genetic-based understanding of community structure. Ecology 1999, 80:416-428.
40. Wolfe J.A. An overview of the origins of the modern vegetation and flora of the northern Rocky Mountains. Annals of the Missouri Botanical Garden 1987, 74:785-803.