Isolation and characterization of algicidal bacteria from Cochlodinium polykrikoides culture

Biotechnology and Bioprocess Engineering

Volumn 16, Issue 6, 2011, Pages 1124-1133

  Oh, Jeong Il ^a   Kim, Min Ju ^a   Lee, Ji Young ^a   Ko, In Jeong ^b   Kim, Wonduck ^c   Kim, Si Wouk ^c  

^a Pusan National University   (South Korea)

^b Korea Advanced Institute of Science and Technology (KAIST)   (South Korea)

^c Chosun University   (South Korea)

Author keywords

Algae; Algicidal bacteria; Cochlodinium polykrikoides; Community analysis; Dinoflagellate

Indexed keywords

ALGAE; ASSOCIATION REACTIONS; BACTERIA; ELECTROPHORESIS;

ALGICIDAL BACTERIA; COCHLODINIUM POLYKRIKOIDES; COMMUNITY ANALYSIS; DINOFLAGELLATE; EXTRACELLULAR COMPOUNDS; INDEPENDENT ANALYSIS; ISOLATION AND CHARACTERIZATION; POLYMERASE CHAIN REACTION-DENATURING GRADIENT GEL ELECTROPHORESES (PCR-DGGE);

POLYMERASE CHAIN REACTION;

ALGAL BLOOM; ALPHAPROTEOBACTERIA; ALTEROMONAS; ARTICLE; BACTERIAL STRAIN; BACTERIUM CULTURE; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATION; COCHLODINIUM POLYKRIKOIDES; CONTROLLED STUDY; DENATURING GRADIENT GEL ELECTROPHORESIS; DENSITY GRADIENT CENTRIFUGATION; DINOFLAGELLATE; GAMMAPROTEOBACTERIA; MICROBIAL COMMUNITY; MOLECULAR WEIGHT; NAUTELLA; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PSEUDOALTEROMONAS; RNA SEQUENCE; SAGITTULA; SCANNING ELECTRON MICROSCOPY; SEQUENCE ANALYSIS; TAXONOMIC IDENTIFICATION; THALASSOBIUS; THERMOSTABILITY;

ALGAE; ALPHAPROTEOBACTERIA; ALTEROMONAS SP.; BACTERIA (MICROORGANISMS); COCHLODINIUM POLYKRIKOIDES; DINOPHYCEAE; GAMMAPROTEOBACTERIA; PSEUDOALTEROMONAS SP.; SAGITTULA; THALASSOBIUS;

EID: 84862960671     PISSN: 12268372     EISSN: 19763816     Source Type: Journal    
DOI: 10.1007/s12257-011-0232-2     Document Type: Article

References (40)

1. Kim, C. J., H. G. Kim, C. H. Kim, and H. M. Oh (2007) Life cycle of the ichthyotoxic dinoflagellate Cochlodinium polykrikoides in Korean coastal waters. Harmful Algae 6:104-111.
2. Jeong, H. J., Y. D. Yoo, J. S. Kim, T. H. Kim, J. H. Kim, N. S. Kang, and W. Yih (2004) Mixotrophy in the phototrophic harmful alga Cochlodinium polykrikoides (dinophycean) : Prey species, the effects of prey concentration, and grazing impact. J. Eukaryot. Microbiol. 51:563-569. (Pubitemid 39348565)
3. Kim, D. I., Y. Matsuyama, S. Nagasoe, M. Yamaguchi, Y. H. Yoon, Y. Oshima, N. Imada, and T. Honjo (2004) Effects of temperature, salinity and irradiance on the growth of the harmful red tide dinoflagellate Cochlodinium polykrikoides Margalef (Dinophyceae). J. Plankton Res. 26:61-66. (Pubitemid 38119178)
4. Doucette, G. J., E. R. McGovern, and J. A. Babinchak (1999) Algicidal bacteria active against Gymnodinium breve (Dinophyceae). I. Bacterial isolation and characterization of killing activity. J. Phycol. 35:1447-1454. (Pubitemid 30049448)
5. Imai, I., Y. Ishida, and Y. Hata (1993) Killing of marine phytoplankton by a gliding bacterium Cytophaga sp., isolated from the coastal sea of Japan. Mar. Biol. 116:527-532. (Pubitemid 24407364)
6. Imai, I., Y. Ishida, K. Sakaguchi, and Y. Hata (1995) Algicidal marine bacteria isolated from northern Hiroshima bay, Japan. Fish. Sci. 61:892-892.
7. Kim, D., J. F. Kim, J. H. Yim, S. K. Kwon, C. H. Lee, and H. K. Lee (2008) Red to Red - the marine bacterium Hahella chejuensis and its product prodigiosin for mitigation of harmful algal blooms. J. Microbiol. Biotechnol. 18:1621-1629.
8. Kim, M. J., S. Y. Jeong, and S. J. Lee (2008) Isolation, identification, and algicidal activity of marine bacteria against Cochlodinium polykrikoides. J. Appl. Phycol. 20:1069-1078.
9. Lovejoy, C., J. P. Bowman, and G. M. Hallegraeff (1998) Algicidal effects of a novel marine Pseudoalteromonas isolate (class Proteobacteria, gamma subdivision) on harmful algal bloom species of the genera Chattonella, Gymnodinium, and Heterosigma. Appl. Environ. Microbiol. 64:2806-2813. (Pubitemid 28363145)
10. Green, D. H., L. E. Llewellyn, A. P. Negri, S. I. Blackburn, and C. J. S. Bolch (2004) Phylogenetic and functional diversity of the cultivable bacterial community associated with the paralytic shellfish poisoning dinoflagellate Gymnodinium catenatum. FEMS Microbiol. Ecol. 47:345-357. (Pubitemid 38296611)
11. Rooney-Varga, J. N., M. W. Giewat, M. C. Savin, S. Sood, M. Le Gresley, and J. L. Martin (2005) Links between phytoplankton and bacterial community dynamics in a coastal marine environment. Microb. Ecol. 49:163-175. (Pubitemid 40747814)
12. Wang, X., Z. J. Li, J. Q. Su, Y. Tian, X. R. Ning, H. S. Hong, and T. L. Zheng (2010) Lysis of a red-tide causing alga, Alexandrium tamarense, caused by bacteria from its phycosphere. Biol. Contr. 52:123-130.
13. Amaro, A. M., M. S. Fuentes, S. R. Ogalde, J. A. Venegas, and B. A. Suarez-Isla (2005) Identification and characterization of potentially algal-lytic marine bacteria strongly associated with the toxic dinoflagellate Alexandrium catenella. J. Eukaryot. Microbiol. 52:191-200. (Pubitemid 43923928)
14. Mayali, X. and G. J. Doucette (2002) Microbial community interactions and population dynamics of an algicidal bacterium active against Karenia brevis (Dinophyceae). Harmful Algae 1:277-293. (Pubitemid 37379161)
15. Guillard, R. R. R. and J. H. Ryther (1962) Studies of marine planktonic diatoms. I. Cyclotella nana (Hustedt), and Detonula confervacea (Cleve) Gran. Can. J. Microbiol. 8:229-239.
16. Sambrook, J., E. F. Fritsch, and T. Maniatis (2001) Molecular Cloning: A Laboratory Manual. 3rd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N Y, USA.
17. MacFaddin, T (1984) Biochemical tests for identification of medical bacteria. The Williams & Wilkins Co., Baltimore, Maryland, USA.
18. Thompson, J. D., D. G. Higgins, and T. J. Gibson (1994) Clustal W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680. (Pubitemid 24354800)
19. Saitou, N. and M. Nei (1987) The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
20. Kumar, S., K. Tamura, I. B. Jakobsen, and M. Nei (2001) MEGA2: Molecular evolutionary genetics analysis software. Bioinformatics 17:1244-1245. (Pubitemid 33735359)
21. Alavi, M., T. Miller, K. Erlandson, R. Schneider, and R. Belas (2001) Bacterial community associated with Pfiesteria-like dinoflagellate cultures. Environ. Microbiol. 3:380-396. (Pubitemid 33136735)
22. Fandino, L. B., L. Riemann, G. F. Steward, R. A. Long, and F. Azam (2001) Variations in bacterial community structure during a dinoflagellate bloom analyzed by DGGE and 16S rDNA sequencing. Aquatic Microb. Ecol. 23:119-130. (Pubitemid 34253476)
23. Jasti, S., M. E. Sieracki, N. J. Poulton, M. W. Giewat, and J. N. Rooney-Varga (2005) Phylogenetic diversity and specificity of bacteria closely associated with Alexandrium spp. and other phytoplankton. Appl. Environ. Microbiol. 71:3483-3494. (Pubitemid 40980511)
24. Riemann, L., G. F. Steward, and F. Azam (2000) Dynamics of bacterial community composition and activity during a mesocosm diatom bloom. Appl. Environ. Microbiol. 66:578-587. (Pubitemid 30082744)
25. Riemann, L. and A. Winding (2001) Community dynamics of free-living and particle-associated bacterial assemblages during a freshwater phytoplankton bloom. Microb. Ecol. 42:274-285. (Pubitemid 33141520)
26. Armstrong, E., L. M. Yan, K. G. Boyd, P. C. Wright, and J. G. Burgess (2001) The symbiotic role of marine microbes on living surfaces. Hydrobiol. 461:37-40. (Pubitemid 34067986)
27. Mayali, X. and F. Azam (2004) Algicidal bacteria in the sea and their impact on algal blooms. J. Eukaryot. Microbiol. 51:139-144. (Pubitemid 38503850)
28. Gonzalez, J. M. and M. A. Moran (1997) Numerical dominance of a group of marine bacteria in the α-subclass of the class Proteobacteria in coastal seawater. Appl. Environ. Microbiol. 63:4237-4242. (Pubitemid 27485745)
29. Gonzalez, J. M., F. Mayer, M. A. Moran, R. E. Hodson, and W. B. Whitman (1997) Sagittula stellata gen. nov, sp. nov, a lignintransforming bacterium from a coastal environment. Int. J. Syst. Bacteriol. 47:773-780. (Pubitemid 27327771)
30. Holmstrom, C. and S. Kjelleberg (1999) Marine Pseudoalteromonas species are associated with higher organisms and produce biologically active extracellular agents. FEMS Microbiol. Ecol. 30:285-293.
31. Lee, S. O., J. Kato, N. Takiguchi, A. Kuroda, T. Ikeda, A. Mitsutani, and H. Ohtake (2000) Involvement of an extracellular protease in algicidal activity of the marine bacterium Pseudoalteromonas sp. strain A28. Appl. Environ. Microbiol. 66:4334-4339.
32. Nakashima, T., Y. Miyazaki, Y. Matsuyama, W. Muraoka, K. Yamaguchi, and T. Oda (2006) Producing mechanism of an algicidal compound against red tide phytoplankton in a marine bacterium γ-proteobacterium. Appl. Microbiol. Biotechnol. 73:684-690. (Pubitemid 44748959)
33. Furusawa, G., T. Yoshikawa, A. Yasuda, and T. Sakata (2003) Algicidal activity and gilding motility of Saprospira sp. SS98-5. Can. J. Microbiol. 49:92-100. (Pubitemid 36628186)
34. Jeong, S. Y., K. Ishida, Y. Ito, S. Okada, and M. Murakami (2003) Bacillamide, a novel algicide from the marine bacterium, Bacillus sp SY-1, against the harmful dinoflagellate, Cochlodinium polykrikoides. Tetrahedron Lett. 44:8005-8007. (Pubitemid 37186967)
35. Croft, M. T., A. D. Lawrence, E. Raux-Deery, M. J. Warren, and A. G. Smith (2005) Algae acquire vitamin B12 through a symbiotic relationship with bacteria. Nature 438:90-93. (Pubitemid 41599825)
36. Azam, F., D. C. Smith, G. F. Steward, and A. Hagstrom (1994) Bacteria-organic-matter coupling and its significance for oceanic carbon cycling. Microb. Ecol. 28:167-179.
37. Romera-Castillo, C., H. Sarmento, X. A. Alvarez-Salgado, J. M. Gasol, and C. Marrase (2010) Production of chromophoric dissolved organic matter by marine phytoplankton. Limnol. Oceanogr. 55:446-454.
38. Blom, J. F. and J. Pernthaler (2010) Antibiotic effects of three strains of chrysophytes (Ochromonas, Poterioochromonas) on freshwater bacterial isolates. FEMS Microbiol. Ecol. 71:281-290.
39. Liao, W. R., J. Y. Lin, W. Y. Shieh, W. L. Jeng, and R. Huang (2003) Antibiotic activity of lectins from marine algae against marine vibrios. J. Ind. Microbiol. Biotechnol. 30:433-439. (Pubitemid 37100326)
40. Taskin, E., M. Ozturk, E. Taskin, and O. Kurt (2007) Antibacterial activities of some marine algae from the Aegean Sea (Turkey). Afr. J. Biotechnol. 6:2746-2751.