-
1
-
-
0032698874
-
ABC-ATPases, adaptable energy generators fuelling transmembrane movement of a variety of molecules in organisms from bacteria to humans
-
DOI 10.1006/jmbi.1999.2993
-
Holland, I. B. and Blight, M. A. (1999) ABC-ATPases, adaptable energy generators fuelling transmembrane movement of a variety of molecules in organisms from bacteria to humans J. Mol. Biol. 293, 381-399 (Pubitemid 29516178)
-
(1999)
Journal of Molecular Biology
, vol.293
, Issue.2
, pp. 381-399
-
-
Holland, I.B.1
A. Blight, M.2
-
2
-
-
0032226550
-
Structure and function of multidrug transporters
-
van Veen, H. W. and Konings, W. N. (1998) Structure and function of multidrug transporters Adv. Exp. Med. Biol. 456, 145-158
-
(1998)
Adv. Exp. Med. Biol.
, vol.456
, pp. 145-158
-
-
Van Veen, H.W.1
Konings, W.N.2
-
3
-
-
33846794508
-
About a switch: How P-glycoprotein (ABCB1) harnesses the energy of ATP binding and hydrolysis to do mechanical work
-
DOI 10.1158/1535-7163.MCT-06-0155
-
Sauna, Z. E. and Ambudkar, S. V. (2007) About a switch: How P-glycoprotein (ABCB1) harnesses the energy of ATP binding and hydrolysis to do mechanical work Mol. Cancer Ther. 6, 13-23 (Pubitemid 46206664)
-
(2007)
Molecular Cancer Therapeutics
, vol.6
, Issue.1
, pp. 13-23
-
-
Sauna, Z.E.1
Ambudkar, S.V.2
-
4
-
-
39149089608
-
P-Glycoprotein: So many ways to turn it on
-
Callaghan, R., Crowley, E., Potter, S., and Kerr, I. D. (2008) P-Glycoprotein: So many ways to turn it on J. Clin. Pharmacol. 48, 365-378
-
(2008)
J. Clin. Pharmacol.
, vol.48
, pp. 365-378
-
-
Callaghan, R.1
Crowley, E.2
Potter, S.3
Kerr, I.D.4
-
5
-
-
38349136208
-
Genomics and the mechanism of P-glycoprotein (ABCB1)
-
Sauna, Z. E., Kim, I., and Ambudkar, S. V. (2007) Genomics and the mechanism of P-glycoprotein (ABCB1) J. Bioenerg. Biomembr. 39, 481-487
-
(2007)
J. Bioenerg. Biomembr.
, vol.39
, pp. 481-487
-
-
Sauna, Z.E.1
Kim, I.2
Ambudkar, S.V.3
-
6
-
-
0026669363
-
Characterization of the azidopine and vinblastine binding site of P-glycoprotein
-
Bruggemann, E. P., Currier, S. J., Gottesman, M. M., and Pastan, I. (1992) Characterization of the azidopine and vinblastine binding site of P-glycoprotein J. Biol. Chem. 267, 21020-21026
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 21020-21026
-
-
Bruggemann, E.P.1
Currier, S.J.2
Gottesman, M.M.3
Pastan, I.4
-
7
-
-
0032559001
-
Identification of the cyclosporin-binding site in P-glycoprotein
-
DOI 10.1021/bi981992c
-
Demeule, M., Laplante, A., Murphy, G. F., Wenger, R. M., and Béliveau, R. (1998) Identification of the cyclosporin-binding site in P-glycoprotein Biochemistry 37, 18110-18118 (Pubitemid 29023968)
-
(1998)
Biochemistry
, vol.37
, Issue.51
, pp. 18110-18118
-
-
Demeule, M.1
Laplante, A.2
Murphy, G.F.3
Wenger, R.M.4
Beliveau, R.5
-
8
-
-
0037113961
-
Location of the rhodamine-binding site in the human multidrug resistance P-glycoprotein
-
DOI 10.1074/jbc.M208433200
-
Loo, T. W. and Clarke, D. M. (2002) Location of the rhodamine-binding site in the human multidrug resistance P-glycoprotein J. Biol. Chem. 277, 44332-44338 (Pubitemid 36157868)
-
(2002)
Journal of Biological Chemistry
, vol.277
, Issue.46
, pp. 44332-44338
-
-
Loo, T.W.1
Clarke, D.M.2
-
9
-
-
33749985062
-
Transmembrane segment 7 of human P-glycoprotein forms part of the drug-binding pocket
-
DOI 10.1042/BJ20060715
-
Loo, T. W., Bartlett, M. C., and Clarke, D. M. (2006) Transmembrane segment 7 of human P-glycoprotein forms part of the drug-binding pocket Biochem. J. 399, 351-359 (Pubitemid 44570297)
-
(2006)
Biochemical Journal
, vol.399
, Issue.2
, pp. 351-359
-
-
Loo, T.W.1
Bartlett, M.C.2
Clarke, D.M.3
-
10
-
-
33745008903
-
Transmembrane segment 1 of human P-glycoprotein contributes to the drug-binding pocket
-
DOI 10.1042/BJ20060012
-
Loo, T. W., Bartlett, M. C., and Clarke, D. M. (2006) Transmembrane segment 1 of human P-glycoprotein contributes to the drug-binding pocket Biochem. J. 396, 537-545 (Pubitemid 44228168)
-
(2006)
Biochemical Journal
, vol.396
, Issue.3
, pp. 537-545
-
-
Loo, T.W.1
Bartlett, M.C.2
Clarke, D.M.3
-
11
-
-
0028901538
-
Functional evidence that transmembrane 12 and the loop between transmembrane 11 and 12 form part of the drug-binding domain in P-glycoprotein encoded by mdr1
-
Zhang, X., Collins, K. I., and Greenberger, L. M. (1995) Functional evidence that transmembrane 12 and the loop between transmembrane 11 and 12 form part of the drug-binding domain in P-glycoprotein encoded by mdr1 J. Biol. Chem. 270, 5441-5448
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 5441-5448
-
-
Zhang, X.1
Collins, K.I.2
Greenberger, L.M.3
-
12
-
-
0141994817
-
Simultaneous binding of two different drugs in the binding pocket of the human multidrug resistance P-glycoprotein
-
DOI 10.1074/jbc.M308559200
-
Loo, T. W., Bartlett, M. C., and Clarke, D. M. (2003) Simultaneous binding of two different drugs in the binding pocket of the human multidrug resistance P-glycoprotein J. Biol. Chem. 278, 39706-39710 (Pubitemid 37248532)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.41
, pp. 39706-39710
-
-
Loo, T.W.1
Bartlett, M.C.2
Clarke, D.M.3
-
13
-
-
0029559159
-
The catalytic cycle of P-glycoprotein
-
DOI 10.1016/0014-5793(95)01345-8
-
Senior, A. E., al-Shawi, M. K., and Urbatsch, I. L. (1995) The catalytic cycle of P-glycoprotein FEBS Lett. 377, 285-289 (Pubitemid 26025714)
-
(1995)
FEBS Letters
, vol.377
, Issue.3
, pp. 285-289
-
-
Senior, A.E.1
Al-Shawi, M.K.2
Urbatsch, I.L.3
-
14
-
-
0028940488
-
ATP hydrolysis by multidrug-resistance protein from Chinese hamster ovary cells
-
Senior, A. E., al-Shawi, M. K., and Urbatsch, I. L. (1995) ATP hydrolysis by multidrug-resistance protein from Chinese hamster ovary cells J. Bioenerg. Biomembr. 27, 31-36
-
(1995)
J. Bioenerg. Biomembr.
, vol.27
, pp. 31-36
-
-
Senior, A.E.1
Al-Shawi, M.K.2
Urbatsch, I.L.3
-
15
-
-
0028362501
-
Characterization of the ATPase activity of purified Chinese hamster P- glycoprotein
-
DOI 10.1021/bi00189a008
-
Urbatsch, I. L., al-Shawi, M. K., and Senior, A. E. (1994) Characterization of the ATPase activity of purified Chinese hamster P-glycoprotein Biochemistry 33, 7069-7076 (Pubitemid 24208742)
-
(1994)
Biochemistry
, vol.33
, Issue.23
, pp. 7069-7076
-
-
Urbatsch, I.L.1
Al-Shawi, M.K.2
Senior, A.E.3
-
16
-
-
0028786395
-
Both P-glycoprotein nucleotide-binding sites are catalytically active
-
Urbatsch, I. L., Sankaran, B., Bhagat, S., and Senior, A. E. (1995) Both P-glycoprotein nucleotide-binding sites are catalytically active J. Biol. Chem. 270, 26956-26961
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 26956-26961
-
-
Urbatsch, I.L.1
Sankaran, B.2
Bhagat, S.3
Senior, A.E.4
-
17
-
-
63449139456
-
Structure of P-glycoprotein reveals a molecular basis for poly-specific drug binding
-
Aller, S. G., Yu, J., Ward, A., Weng, Y., and Chittaboina, S. 2009, Structure of P-glycoprotein reveals a molecular basis for poly-specific drug binding Science 323, 1718-1722
-
(2009)
Science
, vol.323
, pp. 1718-1722
-
-
Aller, S.G.1
Yu, J.2
Ward, A.3
Weng, Y.4
Chittaboina, S.5
-
18
-
-
33748644877
-
Structure of a bacterial multidrug ABC transporter
-
DOI 10.1038/nature05155, PII NATURE05155
-
Dawson, R. J. P. and Locher, K. P. (2006) Structure of a bacterial multidrug ABC transporter Nature 443, 180-185 (Pubitemid 44387602)
-
(2006)
Nature
, vol.443
, Issue.7108
, pp. 180-185
-
-
Dawson, R.J.P.1
Locher, K.P.2
-
19
-
-
33847134349
-
Structure of the multidrug ABC transporter Sav1866 from Staphylococcus aureus in complex with AMP-PNP
-
DOI 10.1016/j.febslet.2007.01.073, PII S0014579307001226
-
Dawson, R. J. P. and Locher, K. P. (2007) Structure of the multidrug ABC transporter Sav1866 from Staphylococcus aureus in complex with AMP-PNP FEBS Lett. 581, 935-938 (Pubitemid 46282725)
-
(2007)
FEBS Letters
, vol.581
, Issue.5
, pp. 935-938
-
-
Dawson, R.J.P.1
Locher, K.P.2
-
20
-
-
37649004412
-
Flexibility in the ABC transporter MSBA: Alternating access with a twist
-
Ward, A., Reyes, C. L., Yu, J., Roth, C. B., and Chang, G. (2007) Flexibility in the ABC transporter MSBA: Alternating access with a twist Proc. Natl. Acad. Sci. U.S.A. 104, 19005-19010
-
(2007)
Proc. Natl. Acad. Sci. U.S.A.
, vol.104
, pp. 19005-19010
-
-
Ward, A.1
Reyes, C.L.2
Yu, J.3
Roth, C.B.4
Chang, G.5
-
21
-
-
80053074680
-
Reaction chemistry ABC-style
-
Senior, A. E. (2011) Reaction chemistry ABC-style Proc. Natl. Acad. Sci. U.S.A. 108, 15015-15016
-
(2011)
Proc. Natl. Acad. Sci. U.S.A.
, vol.108
, pp. 15015-15016
-
-
Senior, A.E.1
-
22
-
-
50849114847
-
Multidrug transport by the ABC transporter Sav1866 from Staphylococcus aureus
-
Velamakanni, S., Yao, Y., Gutmann, D. A. P., and van Veen, H. W. (2008) Multidrug transport by the ABC transporter Sav1866 from Staphylococcus aureus Biochemistry 47, 9300-9308
-
(2008)
Biochemistry
, vol.47
, pp. 9300-9308
-
-
Velamakanni, S.1
Yao, Y.2
Gutmann, D.A.P.3
Van Veen, H.W.4
-
23
-
-
50249114683
-
An improved relaxed complex scheme for receptor flexibility in computer-aided drug design
-
Amaro, R. E., Baron, R., and McCammon, J. A. (2008) An improved relaxed complex scheme for receptor flexibility in computer-aided drug design J. Comput.-Aided Mol. Des. 22, 693-705
-
(2008)
J. Comput.-Aided Mol. Des.
, vol.22
, pp. 693-705
-
-
Amaro, R.E.1
Baron, R.2
McCammon, J.A.3
-
24
-
-
79960313955
-
Molecular recognition in the case of flexible targets
-
Ivetac, A. and McCammon, J. A. (2011) Molecular recognition in the case of flexible targets Curr. Pharm. Des. 17, 1663-1671
-
(2011)
Curr. Pharm. Des.
, vol.17
, pp. 1663-1671
-
-
Ivetac, A.1
McCammon, J.A.2
-
25
-
-
0037157153
-
Computational drug design accommodating receptor flexibility: The relaxed complex scheme
-
DOI 10.1021/ja0260162
-
Lin, J., Perryman, A. L., Schames, J. R., and McCammon, J. A. (2002) Computational drug design accommodating receptor flexibility: The relaxed complex scheme J. Am. Chem. Soc. 124, 5632-5633 (Pubitemid 34533490)
-
(2002)
Journal of the American Chemical Society
, vol.124
, Issue.20
, pp. 5632-5633
-
-
Lin, J.-H.1
Perryman, A.L.2
Schames, J.R.3
McCammon, J.A.4
-
26
-
-
33749442647
-
Multiseq: Unifying sequence and structure data for evolutionary analysis
-
Roberts, E., Eargle, J., Wright, D., and Luthey-Schulten, Z. (2006) Multiseq: Unifying sequence and structure data for evolutionary analysis BMC Bioinf. 7, 382
-
(2006)
BMC Bioinf.
, vol.7
, pp. 382
-
-
Roberts, E.1
Eargle, J.2
Wright, D.3
Luthey-Schulten, Z.4
-
27
-
-
0026614434
-
The T R structural transition of insulin; Pathways suggested by targeted energy minimization
-
Engels, M., Jacoby, E., Krüger, P., Schlitter, J., and Wollmer, A. (1992) The T R structural transition of insulin; pathways suggested by targeted energy minimization Protein Eng. 5, 669-677
-
(1992)
Protein Eng.
, vol.5
, pp. 669-677
-
-
Engels, M.1
Jacoby, E.2
Krüger, P.3
Schlitter, J.4
Wollmer, A.5
-
28
-
-
0028455053
-
Targeted molecular dynamics: A new approach for searching pathways of conformational transitions
-
DOI 10.1016/0263-7855(94)80072-3
-
Schlitter, J., Engels, M., and Krüger, P. (1994) Targeted molecular dynamics: A new approach for searching pathways of conformational transitions J. Mol. Graphics 12, 84-89 (Pubitemid 24219247)
-
(1994)
Journal of Molecular Graphics
, vol.12
, Issue.2
, pp. 84-89
-
-
Schlitter, J.1
Engels, M.2
Kruger, P.3
-
29
-
-
0029878720
-
VMD: Visual molecular dynamics
-
DOI 10.1016/0263-7855(96)00018-5
-
Humphrey, W., Dalke, A., and Schulten, K. (1996) VMD: Visual molecular dynamics J. Mol. Graphics 14, 33-38 (Pubitemid 26152973)
-
(1996)
Journal of Molecular Graphics
, vol.14
, Issue.1
, pp. 33-38
-
-
Humphrey, W.1
Dalke, A.2
Schulten, K.3
-
30
-
-
27344436659
-
Scalable molecular dynamics with NAMD
-
DOI 10.1002/jcc.20289
-
Phillips, J. C., Braun, R., Wang, W., Gumbart, J., and Tajkhorshid, E. 2005, Scalable molecular dynamics with NAMD J. Comput. Chem. 26, 1781-1802 (Pubitemid 43078511)
-
(2005)
Journal of Computational Chemistry
, vol.26
, Issue.16
, pp. 1781-1802
-
-
Phillips, J.C.1
Braun, R.2
Wang, W.3
Gumbart, J.4
Tajkhorshid, E.5
Villa, E.6
Chipot, C.7
Skeel, R.D.8
Kale, L.9
Schulten, K.10
-
31
-
-
0013293280
-
The Xplor-NIH NMR molecular structure determination package
-
Schwieters, C. D., Kuszewski, J. J., Tjandra, N., and Clore, G. M. (2003) The Xplor-NIH NMR molecular structure determination package J. Magn. Reson. 160, 65-73
-
(2003)
J. Magn. Reson.
, vol.160
, pp. 65-73
-
-
Schwieters, C.D.1
Kuszewski, J.J.2
Tjandra, N.3
Clore, G.M.4
-
32
-
-
33645868288
-
Using Xplor-NIH for NMR molecular structure determination
-
Schwieters, C. D., Kuszewski, J. J., and Clore, G. M. (2006) Using Xplor-NIH for NMR molecular structure determination Prog. NMR Spectrosc. 48, 66-74
-
(2006)
Prog. NMR Spectrosc.
, vol.48
, pp. 66-74
-
-
Schwieters, C.D.1
Kuszewski, J.J.2
Clore, G.M.3
-
33
-
-
0029619259
-
Knowledge-based protein secondary structure assignment
-
DOI 10.1002/prot.340230412
-
Frishman, D. and Argos, P. (1995) Knowledge-based protein secondary structure assignment Proteins 23, 566-579 (Pubitemid 26009520)
-
(1995)
Proteins: Structure, Function and Genetics
, vol.23
, Issue.4
, pp. 566-579
-
-
Frishman, D.1
Argos, P.2
-
34
-
-
0030339738
-
AQUA and PROCHECK-NMR: Programs for checking the quality of protein structures solved by NMR
-
Laskowski, R. A., Rullmannn, J. A., MacArthur, M. W., Kaptein, R., and Thornton, J. M. (1996) Aqua and Procheck-NMR: Programs for checking the quality of protein structures solved by NMR J. Biomol. NMR 8, 477-486 (Pubitemid 126706801)
-
(1996)
Journal of Biomolecular NMR
, vol.8
, Issue.4
, pp. 477-486
-
-
Laskowski, R.A.1
Rullmann, J.A.C.2
MacArthur, M.W.3
Kaptein, R.4
Thornton, J.M.5
-
35
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J. D., Higgins, D. G., and Gibson, T. J. (1994) Clustal W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Nucleic Acids Res. 22, 4673-4680 (Pubitemid 24354800)
-
(1994)
Nucleic Acids Research
, vol.22
, Issue.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
36
-
-
0041784950
-
All-atom empirical potential for molecular modeling and dynamics studies of proteins
-
MacKerell, A., Jr., Bashford, D., Bellott, M., Dunbrack, R., Jr., and Evanseck, J. 1998, All-atom empirical potential for molecular modeling and dynamics studies of proteins J. Phys. Chem. B 102, 3586-3616 (Pubitemid 128576688)
-
(1998)
Journal of Physical Chemistry B
, vol.102
, Issue.18
, pp. 3586-3616
-
-
MacKerell Jr., A.D.1
Bashford, D.2
Bellott, M.3
Dunbrack Jr., R.L.4
Evanseck, J.D.5
Field, M.J.6
Fischer, S.7
Gao, J.8
Guo, H.9
Ha, S.10
Joseph-McCarthy, D.11
Kuchnir, L.12
Kuczera, K.13
Lau, F.T.K.14
Mattos, C.15
Michnick, S.16
Ngo, T.17
Nguyen, D.T.18
Prodhom, B.19
Reiher III, W.E.20
Roux, B.21
Schlenkrich, M.22
Smith, J.C.23
Stote, R.24
Straub, J.25
Watanabe, M.26
Wiorkiewicz-Kuczera, J.27
Yin, D.28
Karplus, M.29
more..
-
37
-
-
0026743174
-
Multiple protein sequence alignment from tertiary structure comparison: Assignment of global and residue confidence levels
-
Russell, R. B. and Barton, G. J. (1992) Multiple protein sequence alignment from tertiary structure comparison: Assignment of global and residue confidence levels Proteins 14, 309-323
-
(1992)
Proteins
, vol.14
, pp. 309-323
-
-
Russell, R.B.1
Barton, G.J.2
-
38
-
-
13844266306
-
Evolutionary profiles derived from the QR factorization of multiple structural alignments gives an economy of information
-
DOI 10.1016/j.jmb.2004.11.053
-
O'Donoghue, P. and Luthey-Schulten, Z. (2005) Evolutionary profiles derived from the qr factorization of multiple structural alignments gives an economy of information J. Mol. Biol. 346, 875-894 (Pubitemid 40247724)
-
(2005)
Journal of Molecular Biology
, vol.346
, Issue.3
, pp. 875-894
-
-
O'Donoghue, P.1
Luthey-Schulten, Z.2
-
39
-
-
0029705324
-
Automated docking of flexible ligands: Applications of AutoDock
-
Goodsell, D. S., Morris, G. M., and Olson, A. J. (1996) Automated docking of flexible ligands: Applications of Autodock J. Mol. Recognit. 9, 1-5 (Pubitemid 126565462)
-
(1996)
Journal of Molecular Recognition
, vol.9
, Issue.1
, pp. 1-5
-
-
Goodsell, D.S.1
Morris, G.M.2
Olson, A.J.3
-
40
-
-
33947716119
-
Software news and update a semiempirical free energy force field with charge-based desolvation
-
DOI 10.1002/jcc.20634
-
Huey, R., Morris, G. M., Olson, A. J., and Goodsell, D. S. (2007) A semiempirical free energy force field with charge-based desolvation J. Comput. Chem. 28, 1145-1152 (Pubitemid 46506716)
-
(2007)
Journal of Computational Chemistry
, vol.28
, Issue.6
, pp. 1145-1152
-
-
Huey, R.1
Morris, G.M.2
Olson, A.J.3
Goodsell, D.S.4
-
41
-
-
0030203710
-
Distributed automated docking of flexible ligands to proteins: Parallel applications of AutoDock 2.4
-
Morris, G. M., Goodsell, D. S., Huey, R., and Olson, A. J. (1996) Distributed automated docking of flexible ligands to proteins: Parallel applications of Autodock 2.4 J. Comput.-Aided Mol. Des. 10, 293-304 (Pubitemid 126712824)
-
(1996)
Journal of Computer-Aided Molecular Design
, vol.10
, Issue.4
, pp. 293-304
-
-
Morris, G.M.1
Goodsell, D.S.2
Huey, R.3
Olson, A.J.4
-
42
-
-
0036137713
-
Automated docking to multiple target structures: Incorporation of protein mobility and structural water heterogeneity in autodock
-
DOI 10.1002/prot.10028
-
Osterberg, F., Morris, G. M., Sanner, M. F., Olson, A. J., and Goodsell, D. S. (2002) Automated docking to multiple target structures: Incorporation of protein mobility and structural water heterogeneity in Autodock Proteins 46, 34-40 (Pubitemid 34033574)
-
(2002)
Proteins: Structure, Function and Genetics
, vol.46
, Issue.1
, pp. 34-40
-
-
Osterberg, F.1
Morris, G.M.2
Sanner, M.F.3
Olson, A.J.4
Goodsell, D.S.5
-
43
-
-
0346264740
-
Automated docking of ligands to an artificial active site: Augmenting crystallographic analysis with computer modeling
-
DOI 10.1023/B:JCAM.0000004604.87558.02
-
Rosenfeld, R. J., Goodsell, D. S., Musah, R. A., Morris, G. M., and Goodin, D. B. 2003, Automated docking of ligands to an artificial active site: Augmenting crystallographic analysis with computer modeling J. Comput.-Aided Mol. Des. 17, 525-536 (Pubitemid 38008964)
-
(2003)
Journal of Computer-Aided Molecular Design
, vol.17
, Issue.8
, pp. 525-536
-
-
Rosenfeld, R.J.1
Goodsell, D.S.2
Musah, R.A.3
Morris, G.M.4
Goodin, D.B.5
Olson, A.J.6
-
44
-
-
23044503311
-
ATP hydrolysis promotes interactions between the extracellular ends of transmembrane segments 1 and 11 of human multidrug resistance P-glycoprotein
-
DOI 10.1021/bi050705j
-
Loo, T. W., Bartlett, M. C., and Clarke, D. M. (2005) ATP hydrolysis promotes interactions between the extracellular ends of transmembrane segments 1 and 11 of human multidrug resistance P-glycoprotein Biochemistry 44, 10250-10258 (Pubitemid 41076820)
-
(2005)
Biochemistry
, vol.44
, Issue.30
, pp. 10250-10258
-
-
Loo, T.W.1
Bartlett, M.C.2
Clarke, D.M.3
-
45
-
-
0030779102
-
Drug-stimulated ATPase activity of human P-glycoprotein requires movement between transmembrane segments 6 and 12
-
DOI 10.1074/jbc.272.34.20986
-
Loo, T. W. and Clarke, D. M. (1997) Drug-stimulated ATPase activity of human P-glycoprotein requires movement between transmembrane segments 6 and 12 J. Biol. Chem. 272, 20986-20989 (Pubitemid 27373952)
-
(1997)
Journal of Biological Chemistry
, vol.272
, Issue.34
, pp. 20986-20989
-
-
Loo, T.W.1
Clarke, D.M.2
-
46
-
-
0035943691
-
Cross-linking of human multidrug resistance P-glycoprotein by the substrate, tris(2-maleimidoethyl)amine, is altered by ATP hydrolysis. Evidence for rotation of a transmembrane helix
-
Loo, T. W. and Clarke, D. M. (2001) Cross-linking of human multidrug resistance P-glycoprotein by the substrate, tris(2-maleimidoethyl)amine, is altered by ATP hydrolysis. Evidence for rotation of a transmembrane helix J. Biol. Chem. 276, 31800-31805
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 31800-31805
-
-
Loo, T.W.1
Clarke, D.M.2
-
47
-
-
57649134969
-
Processing mutations disrupt interactions between the nucleotide binding and transmembrane domains of P-glycoprotein and the cystic fibrosis transmembrane conductance regulator (CFTR)
-
Loo, T. W., Bartlett, M. C., and Clarke, D. M. (2008) Processing mutations disrupt interactions between the nucleotide binding and transmembrane domains of P-glycoprotein and the cystic fibrosis transmembrane conductance regulator (CFTR) J. Biol. Chem. 283, 28190-28197
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 28190-28197
-
-
Loo, T.W.1
Bartlett, M.C.2
Clarke, D.M.3
-
48
-
-
80053091327
-
Snapshots of the maltose transporter during ATP hydrolysis
-
Oldham, M. L. and Chen, J. (2011) Snapshots of the maltose transporter during ATP hydrolysis Proc. Natl. Acad. Sci. U.S.A. 108, 15152-15156
-
(2011)
Proc. Natl. Acad. Sci. U.S.A.
, vol.108
, pp. 15152-15156
-
-
Oldham, M.L.1
Chen, J.2
-
49
-
-
7244240754
-
12 ATP-binding cassette (ABC) transporter BtuCD
-
DOI 10.1074/jbc.M405084200
-
Oloo, E. O. and Tieleman, D. P. (2004) Conformational transitions induced by the binding of MgATP to the vitamin B12 ATP-binding cassette (ABC) transporter BtuCD J. Biol. Chem. 279, 45013-45019 (Pubitemid 39430915)
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.43
, pp. 45013-45019
-
-
Oloo, E.O.1
Tieleman, D.P.2
-
50
-
-
41549102797
-
Computational models for prediction of interactions with ABC-transporters
-
Ecker, G. F., Stockner, T., and Chiba, P. (2008) Computational models for prediction of interactions with ABC-transporters Drug Discovery Today 13, 311-317
-
(2008)
Drug Discovery Today
, vol.13
, pp. 311-317
-
-
Ecker, G.F.1
Stockner, T.2
Chiba, P.3
-
51
-
-
0037426344
-
Extending the structure of an ABC transporter to atomic resolution: Modeling and simulation studies of MsbA
-
DOI 10.1021/bi027337t
-
Campbell, J. D., Biggin, P. C., Baaden, M., and Sansom, M. S. P. (2003) Extending the structure of an ABC transporter to atomic resolution: Modeling and simulation studies of MsbA Biochemistry 42, 3666-3673 (Pubitemid 36406372)
-
(2003)
Biochemistry
, vol.42
, Issue.13
, pp. 3666-3673
-
-
Campbell, J.D.1
Biggin, P.C.2
Baaden, M.3
Sansom, M.S.P.4
-
52
-
-
63349106226
-
Molecular models of human P-glycoprotein in two different catalytic states
-
Becker, J., Depret, G., Van Bambeke, F., Tulkens, P. M., and Prévost, M. (2009) Molecular models of human P-glycoprotein in two different catalytic states BMC Struct. Biol. 9, 3
-
(2009)
BMC Struct. Biol.
, vol.9
, pp. 3
-
-
Becker, J.1
Depret, G.2
Van Bambeke, F.3
Tulkens, P.M.4
Prévost, M.5
-
53
-
-
47049126229
-
Identification of putative binding sites of P-glycoprotein based on its homology model
-
Globisch, C., Pajeva, I. K., and Wiese, M. (2008) Identification of putative binding sites of P-glycoprotein based on its homology model ChemMedChem 3, 280-295
-
(2008)
ChemMedChem
, vol.3
, pp. 280-295
-
-
Globisch, C.1
Pajeva, I.K.2
Wiese, M.3
-
54
-
-
48749107151
-
Structural insights into P-glycoprotein (ABCB1) by small angle X-ray scattering and electron crystallography
-
McDevitt, C. A., Shintre, C. A., Günter Grossmann, J., Pollock, N. L., and Prince, S. M. 2008, Structural insights into P-glycoprotein (ABCB1) by small angle X-ray scattering and electron crystallography FEBS Lett. 582, 2950-2956
-
(2008)
FEBS Lett.
, vol.582
, pp. 2950-2956
-
-
McDevitt, C.A.1
Shintre, C.A.2
Günter Grossmann, J.3
Pollock, N.L.4
Prince, S.M.5
-
55
-
-
34548133239
-
P-glycoprotein models of the apo and ATP-bound states based on homology with Sav1866 and MalK
-
DOI 10.1016/j.febslet.2007.07.069, PII S0014579307008393
-
O'Mara, M. L. and Tieleman, D. P. (2007) P-Glycoprotein models of the apo and ATP-bound states based on homology with Sav1866 and MalK FEBS Lett. 581, 4217-4222 (Pubitemid 47301854)
-
(2007)
FEBS Letters
, vol.581
, Issue.22
, pp. 4217-4222
-
-
O'Mara, M.L.1
Tieleman, D.P.2
-
56
-
-
33744902318
-
Interaction of transported drugs with the lipid bilayer and P-glycoprotein through a solvation exchange mechanism
-
DOI 10.1529/biophysj.105.077743
-
Omote, H. and Al-Shawi, M. K. (2006) Interaction of transported drugs with the lipid bilayer and P-glycoprotein through a solvation exchange mechanism Biophys. J. 90, 4046-4059 (Pubitemid 43846120)
-
(2006)
Biophysical Journal
, vol.90
, Issue.11
, pp. 4046-4059
-
-
Omote, H.1
Al-Shawi, M.K.2
-
57
-
-
2342533129
-
Structure-Function Relationships of Multidrug Resistance P-Glycoprotein
-
DOI 10.1021/jm031009p
-
Pajeva, I. K., Globisch, C., and Wiese, M. (2004) Structure-function relationships of multidrug resistance P-glycoprotein J. Med. Chem. 47, 2523-2533 (Pubitemid 38580090)
-
(2004)
Journal of Medicinal Chemistry
, vol.47
, Issue.10
, pp. 2523-2533
-
-
Pajeva, I.K.1
Globisch, C.2
Wiese, M.3
-
58
-
-
70449713662
-
Comparison of the inward- and outward-open homology models and ligand binding of human P-glycoprotein
-
Pajeva, I. K., Globisch, C., and Wiese, M. (2009) Comparison of the inward- and outward-open homology models and ligand binding of human P-glycoprotein FEBS J. 276, 7016-7026
-
(2009)
FEBS J.
, vol.276
, pp. 7016-7026
-
-
Pajeva, I.K.1
Globisch, C.2
Wiese, M.3
-
59
-
-
70349512492
-
Binding site of ABC transporter homology models confirmed by ABCB1 crystal structure
-
Ravna, A. W., Sylte, I., and Sager, G. (2009) Binding site of ABC transporter homology models confirmed by ABCB1 crystal structure Theor. Biol. Med. Modell. 6, 20
-
(2009)
Theor. Biol. Med. Modell.
, vol.6
, pp. 20
-
-
Ravna, A.W.1
Sylte, I.2
Sager, G.3
-
60
-
-
79953236980
-
Homology modeling and binding site assessment of the human P-glycoprotein
-
Tarcsay, A. and Keseru, G. M. (2011) Homology modeling and binding site assessment of the human P-glycoprotein Future Med. Chem. 3, 297-307
-
(2011)
Future Med. Chem.
, vol.3
, pp. 297-307
-
-
Tarcsay, A.1
Keseru, G.M.2
-
61
-
-
31844443618
-
The A-loop, a novel conserved aromatic acid subdomain upstream of the Walker A motif in ABC transporters, is critical for ATP binding
-
DOI 10.1016/j.febslet.2005.12.051, PII S0014579305015346, ABC Transporters
-
Ambudkar, S. V., Kim, I., Xia, D., and Sauna, Z. E. (2006) The A-loop, a novel conserved aromatic acid subdomain upstream of the Walker A motif in ABC transporters, is critical for ATP binding FEBS Lett. 580, 1049-1055 (Pubitemid 43185285)
-
(2006)
FEBS Letters
, vol.580
, Issue.4
, pp. 1049-1055
-
-
Ambudkar, S.V.1
Kim, I.-W.2
Xia, D.3
Sauna, Z.E.4
-
62
-
-
79952272763
-
Probing the stereoselectivity of P-glycoprotein-synthesis, biological activity and ligand docking studies of a set of enantiopure benzopyrano[3,4-b] [1,4]oxazines
-
Jabeen, I., Wetwitayaklung, P., Klepsch, F., Parveen, Z., and Chiba, P. 2011, Probing the stereoselectivity of P-glycoprotein-synthesis, biological activity and ligand docking studies of a set of enantiopure benzopyrano[3,4-b] [1,4]oxazines Chem. Commun. 47, 2586-2588
-
(2011)
Chem. Commun.
, vol.47
, pp. 2586-2588
-
-
Jabeen, I.1
Wetwitayaklung, P.2
Klepsch, F.3
Parveen, Z.4
Chiba, P.5
-
63
-
-
80053552409
-
Predicting P-glycoprotein-mediated drug transport based on support vector machine and three-dimensional crystal structure of P-glycoprotein
-
Bikadi, Z., Hazai, I., Malik, D., Jemnitz, K., and Veres, Z. 2011, Predicting P-glycoprotein-mediated drug transport based on support vector machine and three-dimensional crystal structure of P-glycoprotein PLoS One 6, e25815
-
(2011)
PLoS One
, vol.6
, pp. 25815
-
-
Bikadi, Z.1
Hazai, I.2
Malik, D.3
Jemnitz, K.4
Veres, Z.5
-
64
-
-
33646541093
-
The occluded nucleotide conformation of P-glycoprotein
-
DOI 10.1007/s10863-005-9498-4
-
Tombline, G. and Senior, A. E. (2005) The occluded nucleotide conformation of P-glycoprotein J. Bioenerg. Biomembr. 37, 497-500 (Pubitemid 43725182)
-
(2005)
Journal of Bioenergetics and Biomembranes
, vol.37
, Issue.6
, pp. 497-500
-
-
Tombline, G.1
Senior, A.E.2
-
65
-
-
34447311648
-
Uptake or extrusion: Crystal structures of full ABC transporters suggest a common mechanism
-
DOI 10.1111/j.1365-2958.2007.05792.x
-
Dawson, R. J. P., Hollenstein, K., and Locher, K. P. (2007) Uptake or extrusion: Crystal structures of full ABC transporters suggest a common mechanism Mol. Microbiol. 65, 250-257 (Pubitemid 47052721)
-
(2007)
Molecular Microbiology
, vol.65
, Issue.2
, pp. 250-257
-
-
Dawson, R.J.P.1
Hollenstein, K.2
Locher, K.P.3
-
66
-
-
4644265234
-
The drug-binding pocket of the human multidrug resistance P-glycoprotein is accessible to the aqueous medium
-
DOI 10.1021/bi049045t
-
Loo, T. W., Bartlett, M. C., and Clarke, D. M. (2004) The drug-binding pocket of the human multidrug resistance P-glycoprotein is accessible to the aqueous medium Biochemistry 43, 12081-12089 (Pubitemid 39280552)
-
(2004)
Biochemistry
, vol.43
, Issue.38
, pp. 12081-12089
-
-
Loo, T.W.1
Bartlett, M.C.2
Clarke, D.M.3
-
67
-
-
60749083913
-
ABC transporters: The power to change
-
Rees, D. C., Johnson, E., and Lewinson, O. (2009) ABC transporters: The power to change Nat. Rev. Mol. Cell Biol. 10, 218-227
-
(2009)
Nat. Rev. Mol. Cell Biol.
, vol.10
, pp. 218-227
-
-
Rees, D.C.1
Johnson, E.2
Lewinson, O.3
-
68
-
-
0037131184
-
Projection structure of P-glycoprotein by electron microscopy. Evidence for a closed conformation of the nucleotide binding domains
-
DOI 10.1074/jbc.M206871200
-
Lee, J., Urbatsch, I. L., Senior, A. E., and Wilkens, S. (2002) Projection structure of P-glycoprotein by electron microscopy. Evidence for a closed conformation of the nucleotide binding domains J. Biol. Chem. 277, 40125-40131 (Pubitemid 35191004)
-
(2002)
Journal of Biological Chemistry
, vol.277
, Issue.42
, pp. 40125-40131
-
-
Lee, J.-Y.1
Urbatsch, I.L.2
Senior, A.E.3
Wilkens, S.4
-
69
-
-
41949129746
-
Nucleotide-induced structural changes in P-glycoprotein observed by electron microscopy
-
Lee, J., Urbatsch, I. L., Senior, A. E., and Wilkens, S. (2008) Nucleotide-induced structural changes in P-glycoprotein observed by electron microscopy J. Biol. Chem. 283, 5769-5779
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 5769-5779
-
-
Lee, J.1
Urbatsch, I.L.2
Senior, A.E.3
Wilkens, S.4
-
70
-
-
77951877993
-
Human P-glycoprotein is active when the two halves are clamped together in the closed conformation
-
Loo, T. W., Bartlett, M. C., and Clarke, D. M. (2010) Human P-glycoprotein is active when the two halves are clamped together in the closed conformation Biochem. Biophys. Res. Commun. 395, 436-440
-
(2010)
Biochem. Biophys. Res. Commun.
, vol.395
, pp. 436-440
-
-
Loo, T.W.1
Bartlett, M.C.2
Clarke, D.M.3
-
71
-
-
79953173207
-
P-Glycoprotein retains drug-stimulated ATPase activity upon covalent linkage of the two nucleotide binding domains at their C-terminal ends
-
Verhalen, B. and Wilkens, S. (2011) P-Glycoprotein retains drug-stimulated ATPase activity upon covalent linkage of the two nucleotide binding domains at their C-terminal ends J. Biol. Chem. 286, 10476-10482
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 10476-10482
-
-
Verhalen, B.1
Wilkens, S.2
-
72
-
-
77649160276
-
The gates of ion channels and enzymes
-
Zhou, H. and McCammon, J. A. (2010) The gates of ion channels and enzymes Trends Biochem. Sci. 35, 179-185
-
(2010)
Trends Biochem. Sci.
, vol.35
, pp. 179-185
-
-
Zhou, H.1
McCammon, J.A.2
-
73
-
-
0032482925
-
Conformation gating as a mechanism for enzyme specificity
-
DOI 10.1073/pnas.95.16.9280
-
Zhou, H. X., Wlodek, S. T., and McCammon, J. A. (1998) Conformation gating as a mechanism for enzyme specificity Proc. Natl. Acad. Sci. U.S.A. 95, 9280-9283 (Pubitemid 28506222)
-
(1998)
Proceedings of the National Academy of Sciences of the United States of America
, vol.95
, Issue.16
, pp. 9280-9283
-
-
Zhou, H.-X.1
Wlodek, S.T.2
Mccammon, J.A.3
-
74
-
-
0032788590
-
Amino acid neighbours and detailed conformational analysis of cysteines in proteins
-
Petersen, M. T., Jonson, P. H., and Petersen, S. B. (1999) Amino acid neighbours and detailed conformational analysis of cysteines in proteins Protein Eng. 12, 535-548 (Pubitemid 29368960)
-
(1999)
Protein Engineering
, vol.12
, Issue.7
, pp. 535-548
-
-
Petersen, M.T.N.1
Jonson, P.H.2
Petersen, S.B.3
-
75
-
-
0035805573
-
Defining the drug-binding site in the human multidrug resistance P-glycoprotein using a methanethiosulfonate analog of verapamil, MTS-verapamil
-
Loo, T. W. and Clarke, D. M. (2001) Defining the drug-binding site in the human multidrug resistance P-glycoprotein using a methanethiosulfonate analog of verapamil, MTS-verapamil J. Biol. Chem. 276, 14972-14979
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 14972-14979
-
-
Loo, T.W.1
Clarke, D.M.2
-
76
-
-
0031434236
-
Identification of residues in the drug-binding site of human P- glycoprotein using a thiol-reactive substrate
-
DOI 10.1074/jbc.272.51.31945
-
Loo, T. W. and Clarke, D. M. (1997) Identification of residues in the drug-binding site of human P-glycoprotein using a thiol-reactive substrate J. Biol. Chem. 272, 31945-31948 (Pubitemid 28011858)
-
(1997)
Journal of Biological Chemistry
, vol.272
, Issue.51
, pp. 31945-31948
-
-
Loo, T.W.1
Clarke, D.M.2
-
77
-
-
0033544851
-
Identification of residues in the drug-binding domain of human P-glycoprotein: Analysis of transmembrane segment 11 by cysteine-scanning mutagenesis and inhibition by dibromobimane
-
Loo, T. W. and Clarke, D. M. (1999) Identification of residues in the drug-binding domain of human P-glycoprotein. Analysis of transmembrane segment 11 by cysteine-scanning mutagenesis and inhibition by dibromobimane J. Biol. Chem. 274, 35388-35392 (Pubitemid 129512828)
-
(1999)
Journal of Biological Chemistry
, vol.274
, Issue.50
, pp. 35388-35392
-
-
Loo, T.W.1
Clarke, D.M.2
-
78
-
-
0034671916
-
Identification of residues within the drug-binding domain of the human multidrug resistance P-glycoprotein by cysteine-scanning mutagenesis and reaction with dibromobimane
-
DOI 10.1074/jbc.M007741200
-
Loo, T. W. and Clarke, D. M. (2000) Identification of residues within the drug-binding domain of the human multidrug resistance P-glycoprotein by cysteine-scanning mutagenesis and reaction with dibromobimane J. Biol. Chem. 275, 39272-39278 (Pubitemid 32058947)
-
(2000)
Journal of Biological Chemistry
, vol.275
, Issue.50
, pp. 39272-39278
-
-
Loo, T.W.1
Clarke, D.M.2
-
79
-
-
0347379911
-
Methanethiosulfonate Derivatives of Rhodamine and Verapamil Activate Human P-glycoprotein at Different Sites
-
DOI 10.1074/jbc.M310448200
-
Loo, T. W., Bartlett, M. C., and Clarke, D. M. (2003) Methanethiosulfonate derivatives of rhodamine and verapamil activate human P-glycoprotein at different sites J. Biol. Chem. 278, 50136-50141 (Pubitemid 37548851)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.50
, pp. 50136-50141
-
-
Loo, T.W.1
Bartlett, M.C.2
Clarke, D.M.3
-
80
-
-
0038419822
-
Permanent activation of the human P-glycoprotein by covalent modification of a residue in the drug-binding site
-
DOI 10.1074/jbc.C300154200
-
Loo, T. W., Bartlett, M. C., and Clarke, D. M. (2003) Permanent activation of the human P-glycoprotein by covalent modification of a residue in the drug-binding site J. Biol. Chem. 278, 20449-20452 (Pubitemid 36806339)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.23
, pp. 20449-20452
-
-
Loo, T.W.1
Bartlett, M.C.2
Clarke, D.M.3
-
81
-
-
69949167524
-
Identification of residues in the drug translocation pathway of the human multidrug resistance P-glycoprotein by arginine mutagenesis
-
Loo, T. W., Bartlett, M. C., and Clarke, D. M. (2009) Identification of residues in the drug translocation pathway of the human multidrug resistance P-glycoprotein by arginine mutagenesis J. Biol. Chem. 284, 24074-24087
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 24074-24087
-
-
Loo, T.W.1
Bartlett, M.C.2
Clarke, D.M.3
-
82
-
-
0037687304
-
Substrate-induced conformational changes in the transmembrane segments of human P-glycoprotein: Direct evidence for the substrate-induced fit mechanism for drug binding
-
DOI 10.1074/jbc.C300073200
-
Loo, T. W., Bartlett, M. C., and Clarke, D. M. (2003) Substrate-induced conformational changes in the transmembrane segments of human P-glycoprotein. Direct evidence for the substrate-induced fit mechanism for drug binding J. Biol. Chem. 278, 13603-13606 (Pubitemid 36799891)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.16
, pp. 13603-13606
-
-
Loo, T.W.1
Bartlett, M.C.2
Clarke, D.M.3
-
84
-
-
47049101437
-
Mutational analysis of ABC proteins
-
Loo, T. W. and Clarke, D. M. (2008) Mutational analysis of ABC proteins Arch. Biochem. Biophys. 476, 51-64
-
(2008)
Arch. Biochem. Biophys.
, vol.476
, pp. 51-64
-
-
Loo, T.W.1
Clarke, D.M.2
-
85
-
-
33846419807
-
How can we best use structural information on P-glycoprotein to design inhibitors?
-
DOI 10.1016/j.pharmthera.2006.10.003, PII S0163725806001860
-
McDevitt, C. A. and Callaghan, R. (2007) How can we best use structural information on P-glycoprotein to design inhibitors? Pharmacol. Ther. 113, 429-441 (Pubitemid 46149055)
-
(2007)
Pharmacology and Therapeutics
, vol.113
, Issue.2
, pp. 429-441
-
-
McDevitt, C.A.1
Callaghan, R.2
-
86
-
-
34548853133
-
Structure and mechanism of ABC transporter proteins
-
DOI 10.1016/j.sbi.2007.07.003, PII S0959440X07001029
-
Hollenstein, K., Dawson, R. J., and Locher, K. P. (2007) Structure and mechanism of ABC transporter proteins Curr. Opin. Struct. Biol. 17, 412-418 (Pubitemid 47451766)
-
(2007)
Current Opinion in Structural Biology
, vol.17
, Issue.4
, pp. 412-418
-
-
Hollenstein, K.1
Dawson, R.J.2
Locher, K.P.3
|