The cold-induced basic helix-loop-helix transcription factor gene MdCIbHLH1 encodes an ICE-like protein in apple

BMC Plant Biology

Volumn 12, Issue , 2012, Pages

  Feng, Xiao Ming ^a   Zhao, Qiang ^a   Zhao, Ling Ling ^b   Qiao, Yu ^a   Xie, Xing Bin ^a   Li, Hui Feng ^c   Yao, Yu Xin ^a   You, Chun Xiang ^a   Hao, Yu Jin ^a  

^a SHANDONG AGRICULTURAL UNIVERSITY   (China)

^b Yantai Academy of Agricultural Sciences   (China)

^c Shandong Provincial Key Laboratory of Fruit Tree Biotechnology Breeding   (China)

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS; MALUS X DOMESTICA; NICOTIANA TABACUM;

ARABIDOPSIS PROTEIN; BASIC HELIX LOOP HELIX TRANSCRIPTION FACTOR; DREB1A PROTEIN, ARABIDOPSIS; TRANSACTIVATOR PROTEIN; TRANSCRIPTION FACTOR; VEGETABLE PROTEIN;

ACCLIMATIZATION; ARABIDOPSIS; ARTICLE; COLD; DNA SEQUENCE; ENZYME SPECIFICITY; GENE EXPRESSION REGULATION; GENETICS; MALUS; METABOLISM; MOLECULAR CLONING; PHYLOGENY; PHYSIOLOGICAL STRESS; PLANT GENE; PROMOTER REGION; PROTEIN BINDING; PROTEIN DEGRADATION; SUMOYLATION; TRANSGENIC PLANT; UBIQUITINATION;

ACCLIMATIZATION; ARABIDOPSIS; ARABIDOPSIS PROTEINS; BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTORS; CLONING, MOLECULAR; COLD TEMPERATURE; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; MALUS; PHYLOGENY; PLANT PROTEINS; PLANTS, GENETICALLY MODIFIED; PROMOTER REGIONS, GENETIC; PROTEIN BINDING; PROTEOLYSIS; SEQUENCE ANALYSIS, DNA; STRESS, PHYSIOLOGICAL; SUBSTRATE SPECIFICITY; SUMOYLATION; TRANS-ACTIVATORS; TRANSCRIPTION FACTORS; UBIQUITINATION;

EID: 84862822415     PISSN: None     EISSN: 14712229     Source Type: Journal    
DOI: 10.1186/1471-2229-12-22     Document Type: Article

References (38)

1. Cesaraccio C, Spano D, Snyderc RL, Duce P. Chilling and forcing model to predict bud-burst of crop and forest species. Agr Forest Meteorol 2004, 126:1-13.
2. Farajzadeh M, Rahimi M, Kamalib GA, Mavrommatisc T. Modelling apple tree bud burst time and frost risk in Iran. Meteorol Appl 2010, 17:45-52.
3. Vestal CK. First and last occurrences of low temperature during the cold season. Mon Weather Rev 1971, 99:650-652.
4. Agarwal M, Hao Y, Kapoor A, Dong CH, Fujii H, Zheng X, Zhu JK. A R2R3 type MYB transcription factor is involved in the cold regulation of CBF genes and in acquired freezing tolerance. J Biol Chem 2006, 281:37636-37645. 10.1074/jbc.M605895200, 17015446.
5. Thomashow MF. Plant cold acclimation, freezing tolerance genes and regulatory mechanisms. Annu Rev Plant Physiol Plant Mol Biol 1999, 50:571-599. 10.1146/annurev.arplant.50.1.571, 15012220.
6. Shinozaki K, Yamaguchi-Shinozaki K, Seki M. Regulatory network of gene expression in the drought and cold stress responses. Curr Opin Plant Biol 2003, 6:410-417. 10.1016/S1369-5266(03)00092-X, 12972040.
7. Shinozaki K, Yamaguchi-Shinozaki K. Molecular response to dehydration and low temperature: differences and cross-talk between two stress signaling pathways. Curr Opin Plant Biol 2000, 3:217-223.
8. Thomashow MF. So what's new in the field of plant cold acclimation? Lots!. Plant Physiol 2001, 125:89-93. 10.1104/pp.125.1.89, 1539333, 11154304.
9. Chinnusamy V, Ohta M, Kanrar S, Lee B, Hong X, Agarwal M, Zhu JK. ICE1: a regulator of cold-induced transcriptome and freezing tolerance in Arabidopsis. Gene Dev 2003, 17:1043-1054. 10.1101/gad.1077503, 196034, 12672693.
10. Steponkus PL, Uemura M, Joseph RA, Gilmour SJ, Thomashow MF. Mode of action of the COR15 gene on the freezing tolerance of Arabidopsis thaliana. Proc Natl Acad Sci USA 1998, 95:14570-14575. 10.1073/pnas.95.24.14570, 24414, 9826741.
11. Jaglo KR, Kleff S, Amundsen KL, Zhang X, Haake V, Zhang JZ, Deits T, Thomashow MF. Components of the Arabidopsis C-repeat/dehydration-responsive element binding factor cold-response pathway are conserved in Brassica napus and other plant species. Plant Physiol 2001, 127:910-917. 10.1104/pp.010548, 129262, 11706173.
12. Gilmour SJ, Zarka DG, Stockinger EJ, Salazar MP, Houghton JM, Thomashow MF. Low temperature regulation of the Arabidopsis CBF family of AP2 transcriptional activators as an early step in cold-induced CO gene expression. Plant J 1998, 16:433-442. 10.1046/j.1365-313x.1998.00310.x, 9881163.
13. Stockinger EJ, Gilmour SJ, Thomashow MF. Arabidopsis thaliana CBF encodes an AP2 domain-containing transcription activator that binds to the C-repeat/DRE, a cisacting DNA regulatory element that stimulates transcription in response to low temperature and water deficit. Proc Natl Acad Sci 1997, 94:1035-1040. 10.1073/pnas.94.3.1035, 19635, 9023378.
14. Liu Q, Kasuga M, Sakuma Y, Abe H, Miura S. Yamaguchi- Shinozaki K, Shinozaki K: Two transcription factors, DREB1 and DREB2, with an EREBP/AP2 DNA binding domain, separate two cellular signal transduction pathways in drought- and low temperature-responsive gene expression, respectively, in Arabidopsis. Plant Cell 1998, 10:1391-1406. 144379, 9707537.
15. Shinwari ZK, Nakashima K, Miura S, Kasuga M, Seki M, Yamaguchi-Shinozaki K, Shinozaki K. An Arabidopsis gene family encoding DRE/CRT binding proteins involved in low-temperature-responsive gene expression. Biochem Biophys Res Commun 1998, 250:161-170. 10.1006/bbrc.1998.9267, 9735350.
16. Gilmour SJ, Fowler SG, Thomashow MF. Arabidopsis transcriptional activators CBF1, CBF2, and CBF3 have matching functional activities. Plant Mol Biol 2004, 54:767-781.
17. Novillo F, Alonso JM, Ecker JR, Salinas J. CBF2/DREB1C is a negative regulator of CBF1/DREB1and CBF3/DREB1expression and plays a central role in stress tolerance in Arabidopsis. Proc Natl Acad Sci USA 2004, 101:3985-3990. 10.1073/pnas.0303029101, 374356, 15004278.
18. Van Buskirk HA, Thomashow MF. Arabidopsis transcription factors regulating cold acclimation. Physiol Plant 2006, 126:72-80.
19. Maruyama K, Sakuma Y, Kasuga M, Ito Y, Seki M, Goda H, Shimada Y, Yoshida S, Shinozaki K, Yamaguchi-Shinozaki K. Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems. Plant J 2004, 38:982-993. 10.1111/j.1365-313X.2004.02100.x, 15165189.
20. Gilmour SJ, Sebolt AM, Salazar MP, Everard JD, Thomashow MF. Overexpression of the Arabidopsis CBF3 transcriptional activator mimics multiple biochemical changes associated with cold acclimation. Plant Physiol 2000, 124:1854-1865. 10.1104/pp.124.4.1854, 59880, 11115899.
21. Hsieh T, Lee J, Charng Y, Chan M. Tomato plants ectopically expressing Arabidopsis CBF1 show enhanced resistance to water deficit stress. Plant Physiol 2002, 130:618-626. 10.1104/pp.006783, 166591, 12376629.
22. Ito Y, Katsura K, Maruyama K, Taji T, Kobayashi M, Seki M, Shinozaki K, Yamaguchi-Shinozaki K. Functional analysis of rice DREB1/CBF-type transcription factors involved in cold-responsive gene expression in transgenic rice. Plant Cell Physiol 2006, 47:141-153.
23. Yang W, Liu XD, Chi XJ, Wu CA, Li YZ, Song LL, Liu XM, Wang YF, Wang FW, Zhang C, Liu Y, Zong JM, Li HY. Dwarf apple MbDREB1 enhances plant tolerance to low temperature, drought, and salt stress via both ABA-dependent and ABA-independent pathways. Planta 2011, 233:219-229. 10.1007/s00425-010-1279-6, 20967459.
24. Wisniewski M, Norelli J, Bassett C, Artlip T, Macarisin D. Ectopic expression of a novel peach (Prunus persica) CBF transcription factor in apple (Malus × domestic) results in short-day induced dormancy and increased cold hardiness. Planta 2011, 233:971-983. 10.1007/s00425-011-1358-3, 21274560.
25. Abe H, Urao T, Ito T, Seki M, Shinozaki K, Yamaguchi-Shinozaki K. Arabidopsis AtMYC2 (bHLH) and AtMYB2 (MYB) function as transcriptional activators in abscisic acid signaling. Plant Cell 2003, 15:63-78. 10.1105/tpc.006130, 143451, 12509522.
26. Kim J, Kim HY. Functional analysis of a calcium-binding transcription factor involved in plant salt stress signaling. Eur Biochem Soc 2006, 580:5251-5256.
27. Lee BH, Henderson DA, Zhu JK. The Arabidopsis cold-responsive transcriptome and its regulation by ICE1. Plant Cell 2005, 17:3155-3175. 10.1105/tpc.105.035568, 1276035, 16214899.
28. Liu L, Duan L, Zhang J, Zhang Z, Mi G, Ren H. Cucumber (Cucumis sativus L.) over-expressing cold-induced transcriptome regulator ICE1 exhibits changed morphological characters and enhances chilling tolerance. Sci Hortic 2010, 124:29-33.
29. Xiang D, Hu X, Zhang Y, Yin K. Over-expression of ICE1 gene in transgenic rice improves cold tolerance. Rice Science 2008, 15:173-178.
30. Dong CH, Agarwal M, Zhang Y, Xie Q, Zhu JK. The negative regulator of plant cold responses, HOS1, is a RING E3 ligase that mediates the ubiquitination and degradation of ICE1. Proc Natl Acad Sci USA 2006, 103:8281-8286. 10.1073/pnas.0602874103, 1472463, 16702557.
31. Miura K, Jin JB, Lee J, Yoo CY, Stirm V, Miura T, Ashworth EN, Bressan RA, Yun DJ, Hasegawa PM. SIZ1-mediated sumoylation of ICE1 controls CBF3/DREB1expression and freezing tolerance in Arabidopsis. Plant Cell 2007, 19:1403-1414. 10.1105/tpc.106.048397, 1913760, 17416732.
32. Carretero-Paulet L, Galstyan A, Roig-Villanova I, Martínez-García JF, Bilbao-Castro JR, Robertson DL. Genome-wide classification and evolutionary analysis of the bHLH family of transcription factors in Arabidopsis, Poplar, Rice, Moss, and Algae. Plant Physiol 2010, 153:1398-1412. 10.1104/pp.110.153593, 2899937, 20472752.
33. Fursova OV, Pogorelko GV, Tarasov VA. Identification of ICE2, a gene involved in cold acclimation which determines freezing tolerance in Arabidopsis thaliana. Gene 2009, 429:98-103. 10.1016/j.gene.2008.10.016, 19026725.
34. Puhakainen T, Li C, Boije-Malm M, Kangasjärvi J, Heino P, Palva ET. Short-day potentiation of low temperature induced gene expression of a C-repeat-binding factor-controlled gene during cold acclimation in silver birch. Plant Physiol 2004, 136:4299-4307. 10.1104/pp.104.047258, 535859, 15563624.
35. Espley RV, Hellens RP, Putterill J, Stevenson DE, Kutty-Amma S, Allan AC. Red colouration in apple fruit is due to the activity of the MYB transcription factor, MdMYB10. Plant J 2007, 49:414-427. 10.1111/j.1365-313X.2006.02964.x, 1865000, 17181777.
36. Clough SJ, Bent AF. Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J 1998, 16:735-743. 10.1046/j.1365-313x.1998.00343.x, 10069079.
37. Dionisio-Sese ML, Tobita S. Antioxidant responses of rice seedlings to salinity stress. Plant Sci 1998, 135:1-9.
38. Oh E, Yamaguchi S, Kamiya Y, Bae G, Chung WI, Choi G. Light activates the degradation of PIL5 protein to promote seed germination through gibberellin in Arabidopsis. Plant J 2006, 47:124-139. 10.1111/j.1365-313X.2006.02773.x, 16740147.