High frequency variations of Helicobacter pylori isolates in individual hosts in a Chinese population

International Journal of Infectious Diseases

Volumn 16, Issue 5, 2012, Pages

  Ren, L ^a   Liao, Y L ^a   Song, Y ^a   Guo, Y ^a   Mao, X H ^a   Xie, Q H ^a   Zhang, W J ^a   Guo, G ^a   Zou, Q M ^a  

^a THIRD MILITARY MEDICAL UNIVERSITY   (China)

Author keywords

Diversity; Helicobacter pylori; Individuals

Indexed keywords

ELONGATION FACTOR; ELONGATION FACTOR P; GUANINE NUCLEOTIDE BINDING PROTEIN; INDOLE 3 GLYCEROL PHOSPHATE SYNTHASE; INORGANIC PYROPHOSPHATASE; PROTEIN; PROTON TRANSPORTING ADENOSINE TRIPHOSPHATE SYNTHASE; UNCLASSIFIED DRUG; UREASE ACCESSORY PROTEIN;

ALLELE; ARTICLE; BACTERIAL COLONIZATION; BACTERIUM CULTURE; BACTERIUM ISOLATE; CHINESE; DUODENUM ULCER; DYSPEPSIA; FEMALE; GASTRITIS; GENETIC VARIABILITY; GENOTYPE; HELICOBACTER PYLORI; HUMAN; MAJOR CLINICAL STUDY; MALE; MICROBIAL DIVERSITY; NONHUMAN; STOMACH ULCER;

ADULT; AGED; AGED, 80 AND OVER; AMINO ACID SEQUENCE; ASIAN CONTINENTAL ANCESTRY GROUP; BACTERIAL PROTEINS; BACTERIAL TYPING TECHNIQUES; DUODENAL ULCER; FEMALE; GASTRITIS; GENETIC VARIATION; GENOTYPE; HELICOBACTER INFECTIONS; HELICOBACTER PYLORI; HUMANS; MALE; MIDDLE AGED; MOLECULAR SEQUENCE DATA; MULTILOCUS SEQUENCE TYPING; RANDOM AMPLIFIED POLYMORPHIC DNA TECHNIQUE; STOMACH ULCER;

EID: 84862784283     PISSN: 12019712     EISSN: 18783511     Source Type: Journal    
DOI: 10.1016/j.ijid.2012.01.006     Document Type: Article

References (30)

1. Linz B., Schuster S.C. Genomic diversity in Helicobacter and related organisms. Res Microbiol 2007, 158:737-744.
2. Parsonnet J., Hansen S., Rodriguez L., Gelb A.B., Warnke R.A., Jellum E., et al. Helicobacter pylori infection and gastric lymphoma. N Engl J Med 1994, 330:1267-1271.
3. Peek R.M., Blaser M.J. Helicobacter pylori and gastrointestinal tract adenocarcinomas. Nat Rev Cancer 2002, 2:28-37.
4. Peterson W.L. Helicobacter pylori and peptic ulcer disease. N Engl J Med 1991, 324:1043-1048.
5. Suerbaum S., Michetti P. Helicobacter pylori infection. N Engl J Med 2002, 347:1175-1186.
6. Cooke C.L., Huff J.L., Solnick J.V. The role of genome diversity and immune evasion in persistent infection with Helicobacter pylori. FEMS Immunol Med Microbiol 2005, 45:11-23.
7. Falush D., Kraft C., Taylor N.S., Correa P., Fox J.G., Achtman M., Suerbaum S. Recombination and mutation during long-term gastric colonization by Helicobacter pylori: estimates of clock rates, recombination size, and minimal age. Proc Natl Acad Sci U S A 2001, 98:15056-15061.
8. Levine S.M., Lin E.A., Emara W., Kang J., DiBenedetto M., Ando T., et al. Plastic cells and populations: DNA substrate characteristics in Helicobacter pylori transformation define a flexible but conservative system for genomic variation. FASEB J 2007, 21:3458-3467.
9. Caristo E., Parola A., Rapa A., Vivenza D., Raselli B., Dondi E., et al. Clarithromycin resistance of Helicobacter pylori strains isolated from children' gastric antrum and fundus as assessed by fluorescent in-situ hybridization and culture on four-sector agar plates. Helicobacter 2008, 13:557-563.
10. Chalkauskas H., Kersulyte D., Cepuliene I., Urbonas V., Ruzeviciene D., Barakauskiene A., et al. Genotypes of Helicobacter pylori in Lithuanian families. Helicobacter 1998, 3:296-302.
11. Israel D.A., Salama N., Krishna U., Rieger U.M., Atherton J.C., Falkow S., Peek R. Helicobacter pylori genetic diversity within the gastric niche of a single human host. Proc Natl Acad Sci U S A 2001, 98:14625-14630.
12. Konno M., Yokota S., Suga T., Takahashi M., Sato K., Fujii N. Predominance of mother-to-child transmission of Helicobacter pylori infection detected by random amplified polymorphic DNA fingerprinting analysis in Japanese families. Pediatr Infect Dis J 2008, 27:999-1003.
13. Kuipers E.J., Israel D.A., Kusters J.G., Gerrits M.M., Weel J., van Der Ende A., et al. Quasispecies development of Helicobacter pylori observed in paired isolates obtained years apart from the same host. J Infect Dis 2000, 181:273-282.
14. Matteo M.J., Granados G., Perez C.V., Olmos M., Sanchez C., Catalano M. Helicobacter pylori cag pathogenicity island genotype diversity within the gastric niche of a single host. J Med Microbiol 2007, 56:664-669.
15. Talarico S., Gold B.D., Fero J., Thompson D.T., Guarner J., Czinn S., Salama N.R. Pediatric Helicobacter pylori isolates display distinct gene coding capacities and virulence gene marker profiles. J Clin Microbiol 2009, 47:1680-1688.
16. Kim J.W., Kim J.G., Chae S.L., Cha Y.J., Park S.M. High prevalence of multiple strain colonization of Helicobacter pylori in Korean patients: DNA diversity among clinical isolates from the gastric corpus, antrum and duodenum. Korean J Intern Med 2004, 19:1-9.
17. Kim Y.S., Kim N., Kim J.M., Kim M.S., Park J.H., Lee M.K., et al. Helicobacter pylori genotyping findings from multiple cultured isolates and mucosal biopsy specimens: strain diversities of Helicobacter pylori isolates in individual hosts. Eur J Gastroenterol Hepatol 2009, 21:522-528.
18. Matteo M.J., Armitano R.I., Granados G., Wonaga A.D., Sanches C., Olmos M., Catalano M. Helicobacter pylori oipA, vacA and dupA genetic diversity in individual hosts. J Med Microbiol 2010, 59:89-95.
19. Park C.Y., Kwak M., Gutierrez O., Graham D.Y., Yamaoka Y. Comparison of genotyping Helicobacter pylori directly from biopsy specimens and genotyping from bacterial cultures. J Clin Microbiol 2003, 41:3336-3338.
20. Salama N.R., Gonzalez-Valencia G., Deatherage B., Aviles-Jimenez F., Atherton J.C., Graham D.Y., Torres J. Genetic analysis of Helicobacter pylori strain populations colonizing the stomach at different times postinfection. J Bacteriol 2007, 189:3834-3845.
21. Davis L., Young K., DiRita V. Genetic manipulation of Campylobacter jejuni. Current protocols in microbiology 2008, 622-638. John Wiley & Sons, New York. R. Coico, G. Lunns (Eds.).
22. Akopyanz N., Bukanov N.O., Westblom T.U., Kresovich S., Berg D.E. DNA diversity among clinical isolates of Helicobacter pylori detected by PCR-based RAPD fingerprinting. Nucleic Acids Res 1992, 20:5137-5142.
23. Falush D., Wirth T., Linz B., Pritchard J.K., Stephens M., Kidd M., et al. Traces of human migrations in Helicobacter pylori populations. Science 2003, 299:1582-1585.
24. Finger S.A., Velapatino B., Kosek M., Santivanez L., Dailidiene D., Quino W., et al. Effectiveness of enterobacterial repetitive intergenic consensus PCR and random amplified polymorphic DNA fingerprinting for Helicobacter pylori strain differentiation. Appl Environ Microbiol 2006, 72:4713-4716.
25. Konno M., Fujii N., Yokota S., Sato K., Takahashi M., Mino E., Sugiyama T. Five-year follow-up study of mother-to-child transmission of Helicobacter pylori infection detected by a random amplified polymorphic DNA fingerprinting method. J Clin Microbiol 2005, 43:2246-2250.
26. Backert S., Moese S., Selbach M., Brinkmann V., Meyer T.F. Phosphorylation of tyrosine 972 of the Helicobacter pylori CagA protein is essential for induction of a scattering phenotype in gastric epithelial cells. Mol Microbiol 2001, 42:631-644.
27. Argent R.H., Thomas R.J., Aviles-Jimenez F., Letley D.P., Limb M.C., El-Omar E.M., Atherton J.C. Toxigenic Helicobacter pylori infection precedes gastric hypochlorhydria in cancer relatives, and H. pylori virulence evolves in these families. Clin Cancer Res 2008, 14:2227-2235.
28. Kang J., Blaser M.J. Bacterial populations as perfect gases: genomic integrity and diversification tensions in Helicobacter pylori. Nat Rev Microbiol 2006, 4:826-836.
29. Colbeck J.C., Hansen L.M., Fong J.M., Solnick J.V. Genotypic profile of the outer membrane proteins BabA and BabB in clinical isolates of Helicobacter pylori. Infect Immun 2006, 74:4375-4378.
30. Suerbaum S., Smith J.M., Bapumia K., Morelli G., Smith N.H., Kunstmann E., et al. Free recombination within Helicobacter pylori. Proc Natl Acad Sci U S A 1998, 95:12619-12624.