메뉴 건너뛰기




Volumn 7, Issue 6, 2012, Pages

Heterotic trait locus (HTL) mapping identifies intra-locus interactions that underlie reproductive hybrid vigor in sorghum bicolor

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CONTROLLED STUDY; GENE LINKAGE DISEQUILIBRIUM; GENE LOCUS; GENE MAPPING; GENETIC ANALYSIS; GENETIC VARIABILITY; GENOTYPE; HETEROSIS; HETEROTIC TRAIT LOCUS MAPPING; HETEROZYGOSITY; HOMOZYGOSITY; INHERITANCE; NONHUMAN; PHENOTYPIC VARIATION; QUANTITATIVE TRAIT; SORGHUM;

EID: 84862639485     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0038993     Document Type: Article
Times cited : (25)

References (54)
  • 2
    • 0003847135 scopus 로고
    • The effects of cross- and self-fertilization in the vegetable kingdom
    • Darwin CR, (1876) The effects of cross- and self-fertilization in the vegetable kingdom. London: John Murray.
    • (1876) London: John Murray
    • Darwin, C.R.1
  • 3
    • 70350048798 scopus 로고    scopus 로고
    • Fundamental concepts in genetics The genetics of inbreeding depression
    • Charlesworth D, Willis JH, (2009) Fundamental concepts in genetics The genetics of inbreeding depression. Nature Reviews Genetics 10: 783-796.
    • (2009) Nature Reviews Genetics , vol.10 , pp. 783-796
    • Charlesworth, D.1    Willis, J.H.2
  • 5
    • 31744440502 scopus 로고    scopus 로고
    • A unified mixed-model method for association mapping that accounts for multiple levels of relatedness
    • Yu J, Pressoir G, Briggs WH, Vroh Bi I, Yamasaki M, et al. (2006) A unified mixed-model method for association mapping that accounts for multiple levels of relatedness. Nat Genet 38: 203-208.
    • (2006) Nat Genet , vol.38 , pp. 203-208
    • Yu, J.1    Pressoir, G.2    Briggs, W.H.3    Vroh Bi, I.4    Yamasaki, M.5
  • 6
    • 77951769145 scopus 로고    scopus 로고
    • The flowering gene SINGLE FLOWER TRUSS drives heterosis for yield in tomato
    • Krieger U, Lippman ZB, Zamir D, (2010) The flowering gene SINGLE FLOWER TRUSS drives heterosis for yield in tomato. Nat Genet 42: 459-463.
    • (2010) Nat Genet , vol.42 , pp. 459-463
    • Krieger, U.1    Lippman, Z.B.2    Zamir, D.3
  • 7
    • 33846543858 scopus 로고    scopus 로고
    • Heterosis: revisiting the magic
    • Lippman ZB, Zamir D, (2007) Heterosis: revisiting the magic. Trends Genet 23: 60-66.
    • (2007) Trends Genet , vol.23 , pp. 60-66
    • Lippman, Z.B.1    Zamir, D.2
  • 9
    • 75849154011 scopus 로고    scopus 로고
    • Dissection of the genetic basis of heterosis in an elite maize hybrid by QTL mapping in an immortalized F2 population
    • Tang J, Yan J, Ma X, Teng W, Wu W, et al. (2010) Dissection of the genetic basis of heterosis in an elite maize hybrid by QTL mapping in an immortalized F2 population. Theoretical and Applied Genetics 120: 333-340.
    • (2010) Theoretical and Applied Genetics , vol.120 , pp. 333-340
    • Tang, J.1    Yan, J.2    Ma, X.3    Teng, W.4    Wu, W.5
  • 10
    • 66149107517 scopus 로고    scopus 로고
    • Recombinant near-isogenic lines: a resource for the mendelization of heterotic QTL in maize
    • Pea G, Paulstephenraj P, Cane MA, Sardaro ML, Landi P, et al. (2009) Recombinant near-isogenic lines: a resource for the mendelization of heterotic QTL in maize. Mol Genet Genomics 281: 447-457.
    • (2009) Mol Genet Genomics , vol.281 , pp. 447-457
    • Pea, G.1    Paulstephenraj, P.2    Cane, M.A.3    Sardaro, M.L.4    Landi, P.5
  • 11
    • 84857438156 scopus 로고    scopus 로고
    • The genetic basis of heterosis: multiparental qtl mapping reveals contrasted levels of apparent overdominance among traits of agronomical interest in maize (Zea mays L.)
    • Lariepe A, Mangin B, Jasson S, Combes V, Dumas F, et al. (2012) The genetic basis of heterosis: multiparental qtl mapping reveals contrasted levels of apparent overdominance among traits of agronomical interest in maize (Zea mays L.). Genetics 190: 795-811.
    • (2012) Genetics , vol.190 , pp. 795-811
    • Lariepe, A.1    Mangin, B.2    Jasson, S.3    Combes, V.4    Dumas, F.5
  • 12
    • 8944243552 scopus 로고    scopus 로고
    • Design III with marker loci
    • Cockerham CC, Zeng ZB, (1996) Design III with marker loci. Genetics 143: 1437-1456.
    • (1996) Genetics , vol.143 , pp. 1437-1456
    • Cockerham, C.C.1    Zeng, Z.B.2
  • 13
    • 84966167541 scopus 로고
    • Biometrical analysis of a random mating population - a comparison of five experimental designs
    • Kearsey MJ, (1965) Biometrical analysis of a random mating population- a comparison of five experimental designs. Heredity 20: 205-235.
    • (1965) Heredity , vol.20 , pp. 205-235
    • Kearsey, M.J.1
  • 14
    • 0001608390 scopus 로고
    • Genetic diversity for restriction-fragment-length-polymorphisms and heterosis for 2 diallel sets of maize inbreds
    • Melchinger AE, Lee M, Lamkey KR, Hallauer AR, Woodman WL, (1990) Genetic diversity for restriction-fragment-length-polymorphisms and heterosis for 2 diallel sets of maize inbreds. Theoretical and Applied Genetics 80: 488-496.
    • (1990) Theoretical and Applied Genetics , vol.80 , pp. 488-496
    • Melchinger, A.E.1    Lee, M.2    Lamkey, K.R.3    Hallauer, A.R.4    Woodman, W.L.5
  • 15
    • 11144302954 scopus 로고    scopus 로고
    • Key DNA markers for predicting heterosis in F-1 hybrids of japonica rice
    • Cho YI, Park CW, Kwon SW, Chin JH, Ji HS, et al. (2004) Key DNA markers for predicting heterosis in F-1 hybrids of japonica rice. Breeding Science 54: 389-397.
    • (2004) Breeding Science , vol.54 , pp. 389-397
    • Cho, Y.I.1    Park, C.W.2    Kwon, S.W.3    Chin, J.H.4    Ji, H.S.5
  • 17
    • 0003980563 scopus 로고
    • Harlow, Essex, England New York: Longman Scientific & Technical; Wiley
    • Doggett H, (1988) Sorghum. Harlow, Essex, England New York: Longman Scientific & Technical; Wiley. xviii, 512 p.
    • (1988) Sorghum , pp. 512
    • Doggett, H.1
  • 18
    • 12244281928 scopus 로고
    • Heterosis in sorghum resulting from heterozygous condition of a single gene that affect duration of growth
    • Quinby JR, Karper RE, (1972) Heterosis in sorghum resulting from heterozygous condition of a single gene that affect duration of growth. American Journal of Botany 33: 716-721.
    • (1972) American Journal of Botany , vol.33 , pp. 716-721
    • Quinby, J.R.1    Karper, R.E.2
  • 20
    • 34548587365 scopus 로고    scopus 로고
    • Classical genetic and quantitative trait loci analyses of heterosis in a maize hybrid between two elite inbred lines
    • Frascaroli E, Cane MA, Landi P, Pea G, Gianfranceschi L, et al. (2007) Classical genetic and quantitative trait loci analyses of heterosis in a maize hybrid between two elite inbred lines. Genetics 176: 625-644.
    • (2007) Genetics , vol.176 , pp. 625-644
    • Frascaroli, E.1    Cane, M.A.2    Landi, P.3    Pea, G.4    Gianfranceschi, L.5
  • 21
    • 59449093971 scopus 로고    scopus 로고
    • Dominance, overdominance and epistasis condition the heterosis in two heterotic rice hybrids
    • Li L, Lu K, Chen Z, Mu T, Hu Z, et al. (2008) Dominance, overdominance and epistasis condition the heterosis in two heterotic rice hybrids. Genetics 180: 1725-1742.
    • (2008) Genetics , vol.180 , pp. 1725-1742
    • Li, L.1    Lu, K.2    Chen, Z.3    Mu, T.4    Hu, Z.5
  • 22
    • 18744382780 scopus 로고    scopus 로고
    • PowerMarker: an integrated analysis environment for genetic marker analysis
    • Liu KJ, Muse SV, (2005) PowerMarker: an integrated analysis environment for genetic marker analysis. Bioinformatics 21: 2128-2129.
    • (2005) Bioinformatics , vol.21 , pp. 2128-2129
    • Liu, K.J.1    Muse, S.V.2
  • 23
    • 62849083276 scopus 로고    scopus 로고
    • Strong correlation of wild barley (Hordeum spontaneum) population structure with temperature and precipitation variation
    • Hubner S, Hoffken M, Oren E, Haseneyer G, Stein N, et al. (2009) Strong correlation of wild barley (Hordeum spontaneum) population structure with temperature and precipitation variation. Mol Ecol 18: 1523-1536.
    • (2009) Mol Ecol , vol.18 , pp. 1523-1536
    • Hubner, S.1    Hoffken, M.2    Oren, E.3    Haseneyer, G.4    Stein, N.5
  • 24
    • 0003323267 scopus 로고
    • Controlling dehiscence with plastic bags for hand crosses in Sorghum
    • Schertz KF, Clark LE, (1967) Controlling dehiscence with plastic bags for hand crosses in Sorghum. Crop Science 7: 540-542.
    • (1967) Crop Science , vol.7 , pp. 540-542
    • Schertz, K.F.1    Clark, L.E.2
  • 25
  • 26
    • 71049153239 scopus 로고    scopus 로고
    • Multiple biochemical and morphological factors underlie the production of methylketones in tomato trichomes
    • Ben-Israel I, Yu G, Austin MB, Bhuiyan N, Auldridge M, et al. (2009) Multiple biochemical and morphological factors underlie the production of methylketones in tomato trichomes. Plant Physiol 151: 1952-1964.
    • (2009) Plant Physiol , vol.151 , pp. 1952-1964
    • Ben-Israel, I.1    Yu, G.2    Austin, M.B.3    Bhuiyan, N.4    Auldridge, M.5
  • 27
    • 79960349061 scopus 로고    scopus 로고
    • Association between morphological traits and yield components in the durra sorghums of Ethiopia
    • Tesso T, Tirfessa A, Mohammed H, (2011) Association between morphological traits and yield components in the durra sorghums of Ethiopia. Hereditas 148: 98-109.
    • (2011) Hereditas , vol.148 , pp. 98-109
    • Tesso, T.1    Tirfessa, A.2    Mohammed, H.3
  • 29
    • 35748946021 scopus 로고    scopus 로고
    • TASSEL: software for association mapping of complex traits in diverse samples
    • Bradbury PJ, Zhang Z, Kroon DE, Casstevens TM, Ramdoss Y, et al. (2007) TASSEL: software for association mapping of complex traits in diverse samples. Bioinformatics 23: 2633-2635.
    • (2007) Bioinformatics , vol.23 , pp. 2633-2635
    • Bradbury, P.J.1    Zhang, Z.2    Kroon, D.E.3    Casstevens, T.M.4    Ramdoss, Y.5
  • 30
    • 0028151261 scopus 로고
    • Empirical threshold values for quantitative trait mapping
    • Churchill GA, Doerge RW, (1994) Empirical threshold values for quantitative trait mapping. Genetics 138: 963-971.
    • (1994) Genetics , vol.138 , pp. 963-971
    • Churchill, G.A.1    Doerge, R.W.2
  • 33
    • 0034508740 scopus 로고    scopus 로고
    • An integrated SSR and RFLP linkage map of Sorghum bicolor (L.) Moench
    • Bhattramakki D, Dong JM, Chhabra AK, Hart GE, (2000) An integrated SSR and RFLP linkage map of Sorghum bicolor (L.) Moench. Genome 43: 988-1002.
    • (2000) Genome , vol.43 , pp. 988-1002
    • Bhattramakki, D.1    Dong, J.M.2    Chhabra, A.K.3    Hart, G.E.4
  • 34
    • 60449085226 scopus 로고    scopus 로고
    • Exploration and mapping of microsatellite markers from subtracted drought stress ESTs in Sorghum bicolor (L.) Moench
    • Srinivas G, Satish K, Madhusudhana R, Seetharama N, (2009) Exploration and mapping of microsatellite markers from subtracted drought stress ESTs in Sorghum bicolor (L.) Moench. Theoretical and Applied Genetics 118: 703-717.
    • (2009) Theoretical and Applied Genetics , vol.118 , pp. 703-717
    • Srinivas, G.1    Satish, K.2    Madhusudhana, R.3    Seetharama, N.4
  • 36
    • 0342450691 scopus 로고
    • Manifestations of hybrid vigor in grain sorghum and relations among components of yield weight per bushel and height
    • Kambal AE, Webster OJ, (1966) Manifestations of hybrid vigor in grain sorghum and relations among components of yield weight per bushel and height. Crop Science 6: 513-515.
    • (1966) Crop Science , vol.6 , pp. 513-515
    • Kambal, A.E.1    Webster, O.J.2
  • 37
    • 66449120272 scopus 로고    scopus 로고
    • High-throughput genotyping by whole-genome resequencing
    • Huang X, Feng Q, Qian Q, Zhao Q, Wang L, et al. (2009) High-throughput genotyping by whole-genome resequencing. Genome Res 19: 1068-1076.
    • (2009) Genome Res , vol.19 , pp. 1068-1076
    • Huang, X.1    Feng, Q.2    Qian, Q.3    Zhao, Q.4    Wang, L.5
  • 39
    • 79952102682 scopus 로고    scopus 로고
    • Population genetics of genomics-based crop improvement methods
    • Hamblin MT, Buckler ES, Jannink JL, (2011) Population genetics of genomics-based crop improvement methods. Trends Genet 27: 98-106.
    • (2011) Trends Genet , vol.27 , pp. 98-106
    • Hamblin, M.T.1    Buckler, E.S.2    Jannink, J.L.3
  • 40
    • 78049332150 scopus 로고    scopus 로고
    • Genome-wide association studies of 14 agronomic traits in rice landraces
    • Huang X, Wei X, Sang T, Zhao Q, Feng Q, et al. (2010) Genome-wide association studies of 14 agronomic traits in rice landraces. Nat Genet 42: 961-967.
    • (2010) Nat Genet , vol.42 , pp. 961-967
    • Huang, X.1    Wei, X.2    Sang, T.3    Zhao, Q.4    Feng, Q.5
  • 41
    • 79954619021 scopus 로고    scopus 로고
    • The potential of ultrahigh throughput genomic technologies in crop improvement
    • Yu J, (2009) The potential of ultrahigh throughput genomic technologies in crop improvement. Plant Genome 2: 2.
    • (2009) Plant Genome , vol.2 , pp. 2
    • Yu, J.1
  • 42
    • 54149088214 scopus 로고    scopus 로고
    • Epistasis-the essential role of gene interactions in the structure and evolution of genetic systems
    • Phillips PC, (2008) Epistasis-the essential role of gene interactions in the structure and evolution of genetic systems. Nature Reviews Genetics 9: 855-867.
    • (2008) Nature Reviews Genetics , vol.9 , pp. 855-867
    • Phillips, P.C.1
  • 43
    • 79960966040 scopus 로고    scopus 로고
    • Complex evolutionary events at a tandem cluster of Arabidopsis thaliana genes resulting in a single-locus genetic incompatibility
    • Smith LM, Bomblies K, Weigel D, (2011) Complex evolutionary events at a tandem cluster of Arabidopsis thaliana genes resulting in a single-locus genetic incompatibility. PLoS Genet 7: e1002164.
    • (2011) PLoS Genet , vol.7
    • Smith, L.M.1    Bomblies, K.2    Weigel, D.3
  • 44
    • 0036963688 scopus 로고    scopus 로고
    • Genetic dissection of an elite rice hybrid revealed that heterozygotes are not always advantageous for performance
    • Hua JP, Xing YZ, Xu CG, Sun XL, Yu SB, et al. (2002) Genetic dissection of an elite rice hybrid revealed that heterozygotes are not always advantageous for performance. Genetics 162: 1885-1895.
    • (2002) Genetics , vol.162 , pp. 1885-1895
    • Hua, J.P.1    Xing, Y.Z.2    Xu, C.G.3    Sun, X.L.4    Yu, S.B.5
  • 45
    • 0034845083 scopus 로고    scopus 로고
    • Overdominant epistatic loci are the primary genetic basis of inbreeding depression and heterosis in rice. II. Grain yield components
    • Luo LJ, Li ZK, Mei HW, Shu QY, Tabien R, et al. (2001) Overdominant epistatic loci are the primary genetic basis of inbreeding depression and heterosis in rice. II. Grain yield components. Genetics 158: 1755-1771.
    • (2001) Genetics , vol.158 , pp. 1755-1771
    • Luo, L.J.1    Li, Z.K.2    Mei, H.W.3    Shu, Q.Y.4    Tabien, R.5
  • 46
    • 80052286471 scopus 로고    scopus 로고
    • Different models of genetic variation and their effect on genomic evaluation
    • Clark SA, Hickey JM, van der Werf JH, (2011) Different models of genetic variation and their effect on genomic evaluation. Genet Sel Evol 43: 18.
    • (2011) Genet Sel Evol , vol.43 , pp. 18
    • Clark, S.A.1    Hickey, J.M.2    van der Werf, J.H.3
  • 47
    • 0002465220 scopus 로고
    • Heterosis and the genetics of complex characters
    • Williams W, (1959) Heterosis and the genetics of complex characters. Nature 184: 527-530.
    • (1959) Nature , vol.184 , pp. 527-530
    • Williams, W.1
  • 48
    • 40849089396 scopus 로고    scopus 로고
    • Genetic design and statistical power of nested association mapping in maize
    • Yu J, Holland JB, McMullen MD, Buckler ES, (2008) Genetic design and statistical power of nested association mapping in maize. Genetics 178: 539-551.
    • (2008) Genetics , vol.178 , pp. 539-551
    • Yu, J.1    Holland, J.B.2    McMullen, M.D.3    Buckler, E.S.4
  • 49
    • 84862666040 scopus 로고    scopus 로고
    • Association genetics strategies and resources
    • In: Paterson AH, editors, editor
    • Yu J, Hamblin MT, Tuinstra MR, (2011) Association genetics strategies and resources. In: Paterson AH, editors. editor. Genetics and Genomics of the Saccharinae: Springer Verlag.
    • (2011)
    • Yu, J.1    Hamblin, M.T.2    Tuinstra, M.R.3
  • 50
    • 84857633442 scopus 로고    scopus 로고
    • Islands and Streams: Clusters and gene flow in wild barley populations from the levant
    • Hubner S, Günther T, Flavell A, Fridman E, Graner A, et al. (2012) Islands and Streams: Clusters and gene flow in wild barley populations from the levant. Mol Ecol 21: 1115-1159.
    • (2012) Mol Ecol , vol.21 , pp. 1115-1159
    • Hubner, S.1    Günther, T.2    Flavell, A.3    Fridman, E.4    Graner, A.5
  • 51
    • 0000870489 scopus 로고
    • The optimal balance between size and number of offspring
    • Smith CC, Fretwell SD, (1974) The optimal balance between size and number of offspring. The American Naturalist 108: 499-506.
    • (1974) The American Naturalist , vol.108 , pp. 499-506
    • Smith, C.C.1    Fretwell, S.D.2
  • 52
    • 0000721047 scopus 로고
    • Basis of yield component compensation in crop plants with special reference to field bean Phaseolus vulgaris
    • Adams MW, (1967) Basis of yield component compensation in crop plants with special reference to field bean Phaseolus vulgaris. Crop Science 7: 505-510.
    • (1967) Crop Science , vol.7 , pp. 505-510
    • Adams, M.W.1
  • 53
    • 4544345787 scopus 로고    scopus 로고
    • Zooming in on a quantitative trait for tomato yield using interspecific introgressions
    • Fridman E, Carrari F, Liu YS, Fernie AR, Zamir D, (2004) Zooming in on a quantitative trait for tomato yield using interspecific introgressions. Science 305: 1786-1789.
    • (2004) Science , vol.305 , pp. 1786-1789
    • Fridman, E.1    Carrari, F.2    Liu, Y.S.3    Fernie, A.R.4    Zamir, D.5
  • 54
    • 0034617236 scopus 로고    scopus 로고
    • fw2.2: a quantitative trait locus key to the evolution of tomato fruit size
    • Frary A, Nesbitt TC, Grandillo S, Knaap E, Cong B, et al. (2000) fw2.2: a quantitative trait locus key to the evolution of tomato fruit size. Science 289: 85-88.
    • (2000) Science , vol.289 , pp. 85-88
    • Frary, A.1    Nesbitt, T.C.2    Grandillo, S.3    Knaap, E.4    Cong, B.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.