메뉴 건너뛰기




Volumn 71, Issue 1, 2012, Pages 35-44

Transcript levels, alternative splicing and proteolytic cleavage of TFIIIA control 5S rRNA accumulation during Arabidopsis thaliana development

Author keywords

5S rRNA; alternative splicing; Arabidopsis; proteolytic cleavage; TFIIIA

Indexed keywords

5S RRNA; ALTERNATIVE SPLICING; ARABIDOPSIS; PROTEOLYTIC CLEAVAGE; TFIIIA;

EID: 84862521591     PISSN: 09607412     EISSN: 1365313X     Source Type: Journal    
DOI: 10.1111/j.1365-313X.2012.04948.x     Document Type: Article
Times cited : (17)

References (29)
  • 1
    • 0028951351 scopus 로고
    • Differential binding of oocyte-type and somatic-type 5S rRNA to TFIIIA and ribosomal protein L5 in Xenopus oocytes: Specialization for storage versus mobilization
    • Allison, L.A., North, M.T., and, Neville, L.A., (1995) Differential binding of oocyte-type and somatic-type 5S rRNA to TFIIIA and ribosomal protein L5 in Xenopus oocytes: specialization for storage versus mobilization. Dev. Biol. 168, 284-295.
    • (1995) Dev. Biol. , vol.168 , pp. 284-295
    • Allison, L.A.1    North, M.T.2    Neville, L.A.3
  • 2
    • 0021919691 scopus 로고
    • Formation of a rate-limiting intermediate in 5S RNA gene transcription
    • Bieker, J.J., Martin, P.L., and, Roeder, R.G., (1985) Formation of a rate-limiting intermediate in 5S RNA gene transcription. Cell, 40, 119-127. (Pubitemid 15169313)
    • (1985) Cell , vol.40 , Issue.1 , pp. 119-127
    • Bieker, J.J.1    Martin, P.L.2    Roeder, R.G.3
  • 3
    • 0029027964 scopus 로고
    • The only essential function of TFIIIA in yeast is the transcription of 5S rRNA genes
    • Camier, S., Dechampesme, A.M., and, Sentenac, A., (1995) The only essential function of TFIIIA in yeast is the transcription of 5S rRNA genes. Proc. Natl. Acad. Sci. USA, 92, 9338-9342.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 9338-9342
    • Camier, S.1    Dechampesme, A.M.2    Sentenac, A.3
  • 4
    • 34347356439 scopus 로고    scopus 로고
    • Transcription of the 5S rRNA heterochromatic genes is epigenetically controlled in Arabidopsis thaliana and Xenopus laevis
    • DOI 10.1038/sj.hdy.6800964, PII 6800964
    • Douet, J., and, Tourmente, S., (2007) Transcription of the 5S rRNA heterochromatic genes is epigenetically controlled in Arabidopsis thaliana and Xenopus laevis. Heredity, 99, 5-13. (Pubitemid 47013406)
    • (2007) Heredity , vol.99 , Issue.1 , pp. 5-13
    • Douet, J.1    Tourmente, S.2
  • 5
    • 57749199276 scopus 로고    scopus 로고
    • Interplay of RNA Pol IV and ROS1 during post-embryonic 5S rDNA chromatin remodeling
    • Douet, J., Blanchard, B., Cuvillier, C., and, Tourmente, S., (2008) Interplay of RNA Pol IV and ROS1 during post-embryonic 5S rDNA chromatin remodeling. Plant Cell Physiol. 49, 1783-1791.
    • (2008) Plant Cell Physiol. , vol.49 , pp. 1783-1791
    • Douet, J.1    Blanchard, B.2    Cuvillier, C.3    Tourmente, S.4
  • 6
    • 73349109162 scopus 로고    scopus 로고
    • A Pol V-mediated silencing, independent of RNA-directed DNA methylation, applies to 5S rDNA
    • Douet, J., Tutois, S., and, Tourmente, S., (2009) A Pol V-mediated silencing, independent of RNA-directed DNA methylation, applies to 5S rDNA. PLoS Genet. 5, e1000690.
    • (2009) PLoS Genet. , vol.5
    • Douet, J.1    Tutois, S.2    Tourmente, S.3
  • 7
    • 0028953449 scopus 로고
    • A plant basal in vitro system supporting accurate transcription of both RNA polymerase II- and III-dependent genes: Supplement of green leaf component(s) drives accurate transcription of a light-responsive rbcS gene
    • Fan, H., and, Sugiura, M., (1995) A plant basal in vitro system supporting accurate transcription of both RNA polymerase II- and III-dependent genes: supplement of green leaf component(s) drives accurate transcription of a light-responsive rbcS gene. EMBO J. 14, 1024-1031.
    • (1995) EMBO J. , vol.14 , pp. 1024-1031
    • Fan, H.1    Sugiura, M.2
  • 8
    • 66049155420 scopus 로고    scopus 로고
    • Alternative splicing of anciently exonized 5S rRNA regulates plant transcription factor TFIIIA
    • Fu, Y., Bannach, O., Chen, H., Teune, J.H., Schmitz, A., Steger, G., Xiong, L., and, Barbazuk, B., (2009) Alternative splicing of anciently exonized 5S rRNA regulates plant transcription factor TFIIIA. Genome Res. 19, 913-921.
    • (2009) Genome Res. , vol.19 , pp. 913-921
    • Fu, Y.1    Bannach, O.2    Chen, H.3    Teune, J.H.4    Schmitz, A.5    Steger, G.6    Xiong, L.7    Barbazuk, B.8
  • 9
    • 0021710076 scopus 로고
    • Xenopus 5S gene transcription factor, TF111A: Characterization of a cDNA clone and measurement of RNA levels throughout development
    • Ginsberg, A.M., King, B.O., and, Roeder, R.G., (1984) Xenopus 5S gene transcription factor, TFIIIA: characterization of a cDNA clone and measurement of RNA levels throughout development. Cell, 39, 479-489. (Pubitemid 15198587)
    • (1984) Cell , vol.39 , Issue.3 , pp. 479-489
    • Ginsberg, A.M.1    King, B.O.2    Roeder, R.G.3
  • 10
    • 0025161991 scopus 로고
    • Protein-mediated nuclear export of RNA: 5S rRNA containing small RNPs in Xenopus oocytes
    • Guddat, U., Bakken, A.H., and, Pieler, T., (1990) Protein-mediated nuclear export of RNA: 5S rRNA containing small RNPs in Xenopus oocytes. Cell, 60, 619-628.
    • (1990) Cell , vol.60 , pp. 619-628
    • Guddat, U.1    Bakken, A.H.2    Pieler, T.3
  • 11
    • 0031026254 scopus 로고    scopus 로고
    • Characterization of proteins that interact with the GTP-bound form of the regulatory GTPase Ran in Arabidopsis
    • DOI 10.1046/j.1365-313X.1997.11010093.x
    • Haizel, T., Merkle, T., Pay, A., Fejes, E., and, Nagy, F., (1997) Characterization of proteins that interact with the GTP-bound form of the regulatory GTPase Ran in Arabidopsis. Plant J. 11, 93-103. (Pubitemid 27108360)
    • (1997) Plant Journal , vol.11 , Issue.1 , pp. 93-103
    • Haizel, T.1    Merkle, T.2    Pay, A.3    Fejes, E.4    Nagy, F.5
  • 12
    • 66149156302 scopus 로고    scopus 로고
    • A plant 5S ribosomal RNA mimic regulates alternative splicing of transcription factor IIIA pre-mRNAs
    • Hammond, M.C., Wachter, A., and, Breaker, R.R., (2009) A plant 5S ribosomal RNA mimic regulates alternative splicing of transcription factor IIIA pre-mRNAs. Nat. Struct. Mol. Biol. 16, 541-549.
    • (2009) Nat. Struct. Mol. Biol. , vol.16 , pp. 541-549
    • Hammond, M.C.1    Wachter, A.2    Breaker, R.R.3
  • 13
    • 0023000204 scopus 로고
    • The positive transcription factor of the 5S RNA gene proteolyses during direct exchange between 5S DNA sites
    • DOI 10.1083/jcb.103.3.673
    • Kmiec, E.B., and, Worcel, A., (1986) The positive transcription factor of the 5S RNA gene proteolyses during direct exchange between 5S DNA sites. J. Cell Biol. 103, 673-681. (Pubitemid 17177319)
    • (1986) Journal of Cell Biology , vol.103 , Issue.3 , pp. 673-681
    • Kmiec, E.B.1    Worcel, A.2
  • 14
    • 33746631755 scopus 로고    scopus 로고
    • The transcriptional activity of RNA polymerase I is a key determinant for the level of all ribosome components
    • DOI 10.1101/gad.386106
    • Laferte, A., Favry, E., Sentenac, A., Riva, M., Carles, C., and, Chedin, S., (2006) The transcriptional activity of RNA polymerase I is a key determinant for the level of all ribosome components. Genes Dev. 20, 2030-2040. (Pubitemid 44157455)
    • (2006) Genes and Development , vol.20 , Issue.15 , pp. 2030-2040
    • Laferte, A.1    Favry, E.2    Sentenac, A.3    Riva, M.4    Carles, C.5    Chedin, S.6
  • 15
    • 0347380952 scopus 로고    scopus 로고
    • Changes in 5S rDNA Chromatin Organization and Transcription during Heterochromatin Establishment in Arabidopsis
    • DOI 10.1105/tpc.017467
    • Mathieu, O., Jasencakova, Z., Vaillant, I., Gendrel, A.V., Colot, V., Schubert, I., and, Tourmente, S., (2003a) Changes in 5S rDNA chromatin organization and transcription during heterochromatin establishment in Arabidopsis. Plant Cell, 15, 2929-2939. (Pubitemid 37546261)
    • (2003) Plant Cell , vol.15 , Issue.12 , pp. 2929-2939
    • Mathieu, O.1    Jasencakova, Z.2    Vaillant, I.3    Gendrel, A.-V.4    Colot, V.5    Schubert, I.6    Tourmente, S.7
  • 16
    • 0037736766 scopus 로고    scopus 로고
    • Identification and characterization of transcription factor IIIA and ribosomal protein L5 from Arabidopsis thaliana
    • DOI 10.1093/nar/gkg335
    • Mathieu, O., Yukawa, Y., Prieto, J.L., Vaillant, I., Sugiura, M., and, Tourmente, S., (2003b) Identification and characterization of transcription factor IIIA and ribosomal protein L5 from Arabidopsis thaliana. Nucleic Acids Res. 31, 2424-2433. (Pubitemid 37442111)
    • (2003) Nucleic Acids Research , vol.31 , Issue.9 , pp. 2424-2433
    • Mathieu, O.1    Yukawa, Y.2    Prieto, J.-L.3    Vaillant, I.4    Sugiura, M.5    Tourmente, S.6
  • 17
    • 0033584992 scopus 로고    scopus 로고
    • A feedback loop coupling 5 S rRNA synthesis to accumulation of a ribosomal protein
    • Pittman, R.H., Andrews, M.T., and, Setzer, D.R., (1999) A feedback loop coupling 5S rRNA synthesis to accumulation of a ribosomal protein. J. Biol. Chem. 274, 33198-33201. (Pubitemid 129511614)
    • (1999) Journal of Biological Chemistry , vol.274 , Issue.47 , pp. 33198-33201
    • Pittman, R.H.1    Andrews, M.T.2    Setzer, D.R.3
  • 18
    • 33846807379 scopus 로고    scopus 로고
    • Characterization of AtNUC-L1 reveals a central role of nucleolin in nucleolus organization and silencing of AtNUC-L2 gene in Arabidopsis
    • DOI 10.1091/mbc.E06-08-0751
    • Pontvianne, F., Matia, I., Douet, J., Tourmente, S., Medina, F.J., Echeverria, M., and, Saez-Vasquez, J., (2007) Characterization of AtNUC-L1 reveals a central role of nucleolin in nucleolus organization and silencing of AtNUC-L2 gene in Arabidopsis. Mol. Biol. Cell, 18, 369-379. (Pubitemid 46213208)
    • (2007) Molecular Biology of the Cell , vol.18 , Issue.2 , pp. 369-379
    • Pontvianne, F.1    Matia, I.2    Douet, J.3    Tourmente, S.4    Medina, F.J.5    Echeverria, M.6    Saez-Vasquez, J.7
  • 19
    • 78649686878 scopus 로고    scopus 로고
    • Nucleolin is required for DNA methylation state and the expression of rRNA gene variants in Arabidopsis thaliana
    • Pontvianne, F., Abou-Ellail, M., Douet, J., et al. (2010) Nucleolin is required for DNA methylation state and the expression of rRNA gene variants in Arabidopsis thaliana. PLoS Genet. 6, e1001225.
    • (2010) PLoS Genet. , vol.6
    • Pontvianne, F.1    Abou-Ellail, M.2    Douet, J.3
  • 20
    • 0021918103 scopus 로고
    • Formation and stability of the 5 S RNA transcription complex
    • Setzer, D.R., and, Brown, D.D., (1985) Formation and stability of the 5S RNA transcription complex. J. Biol. Chem. 260, 2483-2492. (Pubitemid 15104857)
    • (1985) Journal of Biological Chemistry , vol.260 , Issue.4 , pp. 2483-2492
    • Setzer, D.R.1    Brown, D.D.2
  • 21
    • 0032754311 scopus 로고    scopus 로고
    • Molecular dissection of nucleolin's role in growth and cell proliferation: New insights
    • Srivastava, M., and, Pollard, H.B., (1999) Molecular dissection of nucleolin's role in growth and cell proliferation: new insights. FASEB J. 13, 1911-1922. (Pubitemid 29517621)
    • (1999) FASEB Journal , vol.13 , Issue.14 , pp. 1911-1922
    • Srivastava, M.1    Pollard, H.B.2
  • 23
    • 0032217290 scopus 로고    scopus 로고
    • Nucleolin: A multifunctional major nucleolar phosphoprotein
    • Tuteja, R., and, Tuteja, N., (1998) Nucleolin: a multifunctional major nucleolar phosphoprotein. Crit. Rev. Biochem. Mol. Biol. 33, 407-436.
    • (1998) Crit. Rev. Biochem. Mol. Biol. , vol.33 , pp. 407-436
    • Tuteja, R.1    Tuteja, N.2
  • 24
    • 0033559169 scopus 로고    scopus 로고
    • Isolation of total RNA from arabidopsis thaliana seeds
    • DOI 10.1006/abio.1998.3045
    • Vicient, C.M., and, Delseny, M., (1999) Isolation of total RNA from Arabidopsis thaliana seeds. Anal. Biochem. 268, 412-413. (Pubitemid 29147161)
    • (1999) Analytical Biochemistry , vol.268 , Issue.2 , pp. 412-413
    • Vicient, C.M.1    Delseny, M.2
  • 25
    • 0028064887 scopus 로고
    • The role of transcription factors, chromatin structure and DNA replication in 5 S RNA gene regulation
    • Wolffe, A.P., (1994) The role of transcription factors, chromatin structure and DNA replication in 5S RNA gene regulation. J. Cell Sci. 107, 2055-2063. (Pubitemid 24273473)
    • (1994) Journal of Cell Science , vol.107 , Issue.8 , pp. 2055-2063
    • Wolffe, A.P.1
  • 26
    • 0023810962 scopus 로고
    • Developmental regulation of two 5S ribosomal RNA genes
    • Wolffe, A.P., and, Brown, D.D., (1988) Developmental regulation of two 5S ribosomal RNA genes. Science, 241, 1626-1632.
    • (1988) Science , vol.241 , pp. 1626-1632
    • Wolffe, A.P.1    Brown, D.D.2
  • 27
    • 0042888952 scopus 로고    scopus 로고
    • Xenopus transcription factor IIIA and the 5S nucleosome: Development of a useful in vitro system
    • DOI 10.1139/o03-043
    • Yang, Z., and, Hayes, J.J., (2003) Xenopus transcription factor IIIA and the 5S nucleosome: development of a useful in vitro system. Biochem. Cell Biol. 81, 177-184. (Pubitemid 37076240)
    • (2003) Biochemistry and Cell Biology , vol.81 , Issue.3 , pp. 177-184
    • Yang, Z.1    Hayes, J.J.2
  • 28
    • 33745112583 scopus 로고    scopus 로고
    • The lba1 mutation of UPF1 RNA helicase involved in nonsense-mediated mRNA decay causes pleiotropic phenotypic changes and altered sugar signalling in Arabidopsis
    • DOI 10.1111/j.1365-313X.2006.02771.x
    • Yoine, M., Ohto, M.A., Onai, K., Mita, S., and, Nakamura, K., (2006) The lba1 mutation of UPF1 RNA helicase involved in nonsense-mediated mRNA decay causes pleiotropic phenotypic changes and altered sugar signalling in Arabidopsis. Plant J. 47, 49-62. (Pubitemid 43883013)
    • (2006) Plant Journal , vol.47 , Issue.1 , pp. 49-62
    • Yoine, M.1    Ohto, M.-A.2    Onai, K.3    Mita, S.4    Nakamura, K.5
  • 29
    • 0031259884 scopus 로고    scopus 로고
    • Efficient in vitro transcription of plant nuclear tRNA(Ser) genes in a nuclear extract from tobacco cultured cells
    • Yukawa, Y., Sugita, M., and, Sugiura, M., (1997) Efficient in vitro transcription of plant nuclear tRNA(Ser) genes in a nuclear extract from tobacco cultured cells. Plant J. 12, 965-970. (Pubitemid 27484503)
    • (1997) Plant Journal , vol.12 , Issue.4 , pp. 965-970
    • Yukawa, Y.1    Sugita, M.2    Sugiura, M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.