메뉴 건너뛰기




Volumn 7, Issue 6, 2012, Pages

Deep-sea origin and in-situ diversification of chrysogorgiid octocorals

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CHRYSOGORGIA; CHRYSOGORGIIDAE; CONTROLLED STUDY; CORAL; COX1 GENE; DEEP SEA; DEEP SEA SPECIES; GENE; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC MARKER; HAPLOTYPE; IRIDOGORGIA; METALLOGORGIA; MONOPHYLY; MTMUTS GENE; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; POLYPHYLY; PSEUDOCHRYSOGORGIA; RADICIPES; SPECIES DIVERSITY;

EID: 84862490527     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0038357     Document Type: Article
Times cited : (63)

References (77)
  • 2
    • 0036233867 scopus 로고    scopus 로고
    • A new species of Chrysogorgia (Anthozoa: Octocorallia) from the Antarctic
    • Cairns SD, (2002) A new species of Chrysogorgia (Anthozoa: Octocorallia) from the Antarctic. Proceedings of the Biological Society of Washington 115: 217-222.
    • (2002) Proceedings of the Biological Society of Washington , vol.115 , pp. 217-222
    • Cairns, S.D.1
  • 3
    • 0002680551 scopus 로고
    • A new species of Trichogorgia and records of two other octocorals new to the Palau Islands
    • Bayer F, (1974) A new species of Trichogorgia and records of two other octocorals new to the Palau Islands. Micronesica 10: 257-271.
    • (1974) Micronesica , vol.10 , pp. 257-271
    • Bayer, F.1
  • 5
    • 34247546629 scopus 로고    scopus 로고
    • A review of the genus Iridogorgia (Octocorallia: Chrysogorgiidae) and its relatives, chiey from the North Atlantic Ocean
    • Watling L, (2007) A review of the genus Iridogorgia (Octocorallia: Chrysogorgiidae) and its relatives, chiey from the North Atlantic Ocean. Journal of the Marine Biological Association of the United Kingdom 87: 393-402.
    • (2007) Journal of the Marine Biological Association of the United Kingdom , vol.87 , pp. 393-402
    • Watling, L.1
  • 6
    • 74049089711 scopus 로고    scopus 로고
    • Deep-sea octocorals and antipatharians show no evidence of seamount-scale endemism in the NW Atlantic
    • Thoma JN, Pante E, Brugler MR, France SC, (2009) Deep-sea octocorals and antipatharians show no evidence of seamount-scale endemism in the NW Atlantic. Marine Ecology Progress Series 397: 25-35.
    • (2009) Marine Ecology Progress Series , vol.397 , pp. 25-35
    • Thoma, J.N.1    Pante, E.2    Brugler, M.R.3    France, S.C.4
  • 7
    • 0002796436 scopus 로고
    • Report on the Anthozoa, and on some additional species dredged by the 'Blake' in 1877-79, and by the U. S. Fish Commission steamer 'Fish Hawk' in 1880-82
    • Verrill A, (1883) Report on the Anthozoa, and on some additional species dredged by the 'Blake' in 1877-79, and by the U. S. Fish Commission steamer 'Fish Hawk' in 1880-82. Bulletin of the Museum of Comparative Zoology, Harvard 11: 72pp.
    • (1883) Bulletin of the Museum of Comparative Zoology, Harvard , vol.11
    • Verrill, A.1
  • 8
    • 0034760229 scopus 로고    scopus 로고
    • Studies on western Atlantic Octocorallia (Coelenterata: Anthozoa). Part 1: The genus Chrysogorgia Duchassaing & Michelotti, 1864
    • Cairns SD, (2001) Studies on western Atlantic Octocorallia (Coelenterata: Anthozoa). Part 1: The genus Chrysogorgia Duchassaing & Michelotti, 1864. Proceedings of the Biological Society of Washington 114: 746-787.
    • (2001) Proceedings of the Biological Society of Washington , vol.114 , pp. 746-787
    • Cairns, S.D.1
  • 9
    • 33750948048 scopus 로고    scopus 로고
    • A molecular phylogenetic analysis of the Octocorallia (Cnidaria: Anthozoa) based on mitochondrial protein-coding sequences
    • McFadden CS, France SC, Sánchez JA, Alderslade P, (2006) A molecular phylogenetic analysis of the Octocorallia (Cnidaria: Anthozoa) based on mitochondrial protein-coding sequences. Molecular Phylogenetics and Evolution 41: 513-527.
    • (2006) Molecular Phylogenetics and Evolution , vol.41 , pp. 513-527
    • McFadden, C.S.1    France, S.C.2    Sánchez, J.A.3    Alderslade, P.4
  • 10
    • 0030111361 scopus 로고    scopus 로고
    • DNA sequence variation of mitochondrial large-subunit rRNA provides support for a two-subclass organization of the Anthozoa (Cnidaria)
    • France SC, Rosel PE, Agenbroad JE, Mullineaux LS, Kocher TD, (1996) DNA sequence variation of mitochondrial large-subunit rRNA provides support for a two-subclass organization of the Anthozoa (Cnidaria). Molecular Marine Biology and Biotechnology 5: 15-28.
    • (1996) Molecular Marine Biology and Biotechnology , vol.5 , pp. 15-28
    • France, S.C.1    Rosel, P.E.2    Agenbroad, J.E.3    Mullineaux, L.S.4    Kocher, T.D.5
  • 11
    • 0035123385 scopus 로고    scopus 로고
    • Phylogenetic relationships within the Octocorallia (Cnidaria: Anthozoa) based on nuclear 18s rRNA sequences
    • Berntson EA, Bayer FM, McArthur AG, France SC, (2001) Phylogenetic relationships within the Octocorallia (Cnidaria: Anthozoa) based on nuclear 18s rRNA sequences. Marine Biology 138: 235-246.
    • (2001) Marine Biology , vol.138 , pp. 235-246
    • Berntson, E.A.1    Bayer, F.M.2    McArthur, A.G.3    France, S.C.4
  • 12
    • 0141657059 scopus 로고    scopus 로고
    • Phylogenetic analyses among octocorals (Cnidaria): mitochondrial and nuclear DNA sequences (lsu-rRNA, 16S and ssu-rRNA, 18S) support two convergent clades of branching gorgonians
    • S_anchez JA, Lasker HR, Taylor DJ, (2003) Phylogenetic analyses among octocorals (Cnidaria): mitochondrial and nuclear DNA sequences (lsu-rRNA, 16S and ssu-rRNA, 18S) support two convergent clades of branching gorgonians. Molecular Phylogenetics and Evolution 29: 31-42.
    • (2003) Molecular Phylogenetics and Evolution , vol.29 , pp. 31-42
    • S-anchez, J.A.1    Lasker, H.R.2    Taylor, D.J.3
  • 14
    • 78650942435 scopus 로고    scopus 로고
    • Pseudochrysogorgia bellona n. gen. n. sp.: a new genus and species of chrysogorgiid octocoral (Coelenterata: Anthozoa) from the Coral Sea
    • Pante E, France SC, (2010) Pseudochrysogorgia bellona n. gen. n. sp.: a new genus and species of chrysogorgiid octocoral (Coelenterata: Anthozoa) from the Coral Sea. Zoosystema 32: 595-612.
    • (2010) Zoosystema , vol.32 , pp. 595-612
    • Pante, E.1    France, S.C.2
  • 19
    • 78650934890 scopus 로고
    • Die Gorgoniden der Siboga-Expedition. I. Die Chrysogorgiiden, volume 13
    • Versluys J, (1902) Die Gorgoniden der Siboga-Expedition. I. Die Chrysogorgiiden, volume 13. Monographie Siboga-Expeditie, 120 pp.
    • (1902) Monographie Siboga-Expeditie , pp. 120
    • Versluys, J.1
  • 20
    • 0003284337 scopus 로고
    • Description of the Alcyonaria collected by the U.S. fisheries steamer "Albatross," mainly in Japanese waters, during 1906
    • Nutting C, (1912) Description of the Alcyonaria collected by the U.S. fisheries steamer "Albatross," mainly in Japanese waters, during 1906. Proceedings of the United States National Museum 43: 1-104.
    • (1912) Proceedings of the United States National Museum , vol.43 , pp. 1-104
    • Nutting, C.1
  • 21
    • 0006003677 scopus 로고
    • The Gorgonarians from Dr. Sixten Bock's expedition to Japan and Bonin Islands 1914
    • Aurivillius M, (1931) The Gorgonarians from Dr. Sixten Bock's expedition to Japan and Bonin Islands 1914. Kungl Svenska Vetens-kapsakad Handlingar (3) 9: 1-337.
    • (1931) Kungl Svenska Vetens-Kapsakad Handlingar , vol.9 , Issue.3 , pp. 1-337
    • Aurivillius, M.1
  • 23
    • 0001042978 scopus 로고
    • Descriptions of the Alcyonaria collected by the U.S. Bureau of Fisheries steamer Albatross in the vicinity of the Hawaiian Islands in 1902
    • Nutting C, (1908) Descriptions of the Alcyonaria collected by the U.S. Bureau of Fisheries steamer Albatross in the vicinity of the Hawaiian Islands in 1902. Proceedings of the United States National Museum 34: 543-601.
    • (1908) Proceedings of the United States National Museum , vol.34 , pp. 543-601
    • Nutting, C.1
  • 26
    • 0002554569 scopus 로고
    • Octocorallia
    • In: Moore R, Editor
    • Bayer F, (1956) Octocorallia. In: Moore R, editor, Treatise on Invertebrate Paleontology. volume (F) Coelenterata, F166-F230.
    • (1956) Treatise on Invertebrate Paleontology , pp. 166-230
    • Bayer, F.1
  • 27
    • 84862500525 scopus 로고
    • The Gorgonacea of the Siboga Expedition I. The Chrysogorgiidae. Siboga-Expeditie
    • Nutting C, (1910) The Gorgonacea of the Siboga Expedition I. The Chrysogorgiidae. Siboga-Expeditie. Monograph XIII.
    • (1910) Monograph XIII
    • Nutting, C.1
  • 28
    • 0001061981 scopus 로고
    • A new species of Chrysogorgia (Octocorallia: Gorgonacea) from New Caledonia, with descriptions of some other species from the Western Pacific
    • Bayer F, Stefani J, (1988) A new species of Chrysogorgia (Octocorallia: Gorgonacea) from New Caledonia, with descriptions of some other species from the Western Pacific. Proceedings of the Biological Society of Washington 101: 257-279.
    • (1988) Proceedings of the Biological Society of Washington , vol.101 , pp. 257-279
    • Bayer, F.1    Stefani, J.2
  • 29
    • 0002682387 scopus 로고
    • Distichogorgia sconsa, a new genus and species of chrysogorgiid octocoral (Coelenterata: Anthozoa) from the Blake Plateau off Northern Florida
    • Bayer F, (1979) Distichogorgia sconsa, a new genus and species of chrysogorgiid octocoral (Coelenterata: Anthozoa) from the Blake Plateau off Northern Florida. Proceedings of the Biological Society of Washington 92: 876-882.
    • (1979) Proceedings of the Biological Society of Washington , vol.92 , pp. 876-882
    • Bayer, F.1
  • 30
    • 0006733632 scopus 로고
    • The genus group taxa of the family Ellisellidae, with clari_cation of the genera established by J. E. Gray (Cnidaria: Octocorallia)
    • Bayer F, Grasshoff M, (1994) The genus group taxa of the family Ellisellidae, with clari_cation of the genera established by J. E. Gray (Cnidaria: Octocorallia). Senkenbergiana biologica 74: 21-45.
    • (1994) Senkenbergiana Biologica , vol.74 , pp. 21-45
    • Bayer, F.1    Grasshoff, M.2
  • 31
    • 20444491634 scopus 로고    scopus 로고
    • A review of long-branch attraction
    • Bergsten J, (2005) A review of long-branch attraction. Cladistics 21: 163-193.
    • (2005) Cladistics , vol.21 , pp. 163-193
    • Bergsten, J.1
  • 32
    • 0001516464 scopus 로고
    • Contributions to the nomenclature, systematics, and morphology of the Octocorallia
    • Bayer F, (1955) Contributions to the nomenclature, systematics, and morphology of the Octocorallia. Proceedings of the United States National Museum 105: 207-220.
    • (1955) Proceedings of the United States National Museum , vol.105 , pp. 207-220
    • Bayer, F.1
  • 33
    • 38549084394 scopus 로고    scopus 로고
    • Soft Corals and Sea Fans: A comprehensive guide to the tropical shallow water genera of the Central West Pacific, the Indian Ocean and the Red Sea
    • Fabricius K, Alderslade P, (2001) Soft Corals and Sea Fans: A comprehensive guide to the tropical shallow water genera of the Central West Pacific, the Indian Ocean and the Red Sea. Townsville, Australia: Australian Institute of Marine Science, 264 pp.
    • (2001) Townsville, Australia: Australian Institute of Marine Science , pp. 264
    • Fabricius, K.1    Alderslade, P.2
  • 36
    • 58349113089 scopus 로고    scopus 로고
    • Calcaxonian octocorals (Cnidaria; Anthozoa) from Eastern Pacific Seamounts
    • Cairns SD, (2007) Calcaxonian octocorals (Cnidaria; Anthozoa) from Eastern Pacific Seamounts. Proceedings of the California Academy of Sciences 58: 511-541.
    • (2007) Proceedings of the California Academy of Sciences , vol.58 , pp. 511-541
    • Cairns, S.D.1
  • 37
    • 0027849866 scopus 로고
    • Morphological plasticity in a gorgonian coral (Briareum as-bestinum) over a depth cline
    • West J, Harvell C, Walls A, (1993) Morphological plasticity in a gorgonian coral (Briareum as-bestinum) over a depth cline. Marine Ecology Progress Series 94: 61-69.
    • (1993) Marine Ecology Progress Series , vol.94 , pp. 61-69
    • West, J.1    Harvell, C.2    Walls, A.3
  • 38
    • 0030952826 scopus 로고    scopus 로고
    • Plasticity in the sclerites of a gorgonian coral: Tests of water motion, light level, and damage cues
    • West J, (1997) Plasticity in the sclerites of a gorgonian coral: Tests of water motion, light level, and damage cues. Biological Bulletin 192: 279-289.
    • (1997) Biological Bulletin , vol.192 , pp. 279-289
    • West, J.1
  • 39
    • 34548363990 scopus 로고    scopus 로고
    • Phenotypic plasticity and morphological integration in a marine modular invertebrate
    • Sánchez JA, Aguilar C, Dorado D, Manrique N, (2007) Phenotypic plasticity and morphological integration in a marine modular invertebrate. BMC Evolutionary Biology 7: 122.
    • (2007) BMC Evolutionary Biology , vol.7 , pp. 122
    • Sánchez, J.A.1    Aguilar, C.2    Dorado, D.3    Manrique, N.4
  • 40
    • 43549085549 scopus 로고    scopus 로고
    • Phenotypic plasticity or speciation? a case from a clonal marine organism
    • Prada C, Schizas NV, Yoshioka PM, (2008) Phenotypic plasticity or speciation? a case from a clonal marine organism. BMC Evolutionary Biology 8: 47.
    • (2008) BMC Evolutionary Biology , vol.8 , pp. 47
    • Prada, C.1    Schizas, N.V.2    Yoshioka, P.M.3
  • 41
    • 38349035751 scopus 로고    scopus 로고
    • Genetic analysis of bamboo corals (Cnidaria: Octocorallia: Isididae): does lack of colony branching distinguish Lepidisis from Keratoisis?
    • France SC, (2007) Genetic analysis of bamboo corals (Cnidaria: Octocorallia: Isididae): does lack of colony branching distinguish Lepidisis from Keratoisis? Bulletin of Marine Science 81: 323-333.
    • (2007) Bulletin of Marine Science , vol.81 , pp. 323-333
    • France, S.C.1
  • 42
    • 74049140730 scopus 로고    scopus 로고
    • Character lability in deep-sea bamboo corals (Octocorallia, Isididae, Keratoisidinae)
    • Duenas L, S_anchez J, (2009) Character lability in deep-sea bamboo corals (Octocorallia, Isididae, Keratoisidinae). Marine Ecology Progress Series 397: 11-23.
    • (2009) Marine Ecology Progress Series , vol.397 , pp. 11-23
    • Duenas, L.1    S-anchez, J.2
  • 43
    • 42549123193 scopus 로고    scopus 로고
    • An alternative to ITS, a hypervariable, single-copy nuclear intron in corals, and its use in detecting cryptic species within the octocoral genus Carijoa
    • Concepcion GT, Crepeau M, Toonen RJ, (2008) An alternative to ITS, a hypervariable, single-copy nuclear intron in corals, and its use in detecting cryptic species within the octocoral genus Carijoa. Coral Reefs 27: 323-336.
    • (2008) Coral Reefs , vol.27 , pp. 323-336
    • Concepcion, G.T.1    Crepeau, M.2    Toonen, R.J.3
  • 44
    • 67651133735 scopus 로고    scopus 로고
    • A generic revision and phylogenetic analysis of the Primnoidae (Cnidaria: Octocorallia)
    • Cairns SD, Bayer FM, (2009) A generic revision and phylogenetic analysis of the Primnoidae (Cnidaria: Octocorallia). Smithsonian Contributions to Zoology 629: 1-79.
    • (2009) Smithsonian Contributions to Zoology , vol.629 , pp. 1-79
    • Cairns, S.D.1    Bayer, F.M.2
  • 45
    • 49149126964 scopus 로고    scopus 로고
    • From offshore to onshore: multiple origins of shallow-water corals from deep-sea ancestors
    • Lindner A, Cairns SD, Cunningham CW, (2008) From offshore to onshore: multiple origins of shallow-water corals from deep-sea ancestors. PLoS ONE 3: e2429.
    • (2008) PLoS ONE , vol.3
    • Lindner, A.1    Cairns, S.D.2    Cunningham, C.W.3
  • 46
    • 0030753810 scopus 로고    scopus 로고
    • Potential for deep sea invasion by Mediterranean shallow water echinoids: Pressure and temperature as stage-specific dispersal barriers
    • Young C, Tyler P, Fenaux L, (1997) Potential for deep sea invasion by Mediterranean shallow water echinoids: Pressure and temperature as stage-specific dispersal barriers. Marine Ecology Progress Series 154: 197-209.
    • (1997) Marine Ecology Progress Series , vol.154 , pp. 197-209
    • Young, C.1    Tyler, P.2    Fenaux, L.3
  • 47
    • 0002013529 scopus 로고
    • Peculiarities of the geographical and vertical distribution of marine isopods and the problem of deep-sea fauna origin
    • Kussakin O, (1973) Peculiarities of the geographical and vertical distribution of marine isopods and the problem of deep-sea fauna origin. Marine Biology 23: 19-34.
    • (1973) Marine Biology , vol.23 , pp. 19-34
    • Kussakin, O.1
  • 49
    • 0001047470 scopus 로고
    • On the place of origin of deep-sea isopods
    • Hessler R, Thistle D, (1975) On the place of origin of deep-sea isopods. Marine Biology 32: 155-165.
    • (1975) Marine Biology , vol.32 , pp. 155-165
    • Hessler, R.1    Thistle, D.2
  • 51
    • 33646536793 scopus 로고    scopus 로고
    • Coral habitat in the Aleutian Islands of Alaska: depth distribution, fine-scale species associations, and fisheries interactions
    • Stone R, (2006) Coral habitat in the Aleutian Islands of Alaska: depth distribution, fine-scale species associations, and fisheries interactions. Coral Reefs 25: 229-238.
    • (2006) Coral Reefs , vol.25 , pp. 229-238
    • Stone, R.1
  • 52
    • 79960855558 scopus 로고    scopus 로고
    • A unique horizontal gene transfer event has provided the octocoral mitochondrial genome with an active mismatch repair gene that has potential for an unusual selfcontained function
    • Bilewitch JP, Degnan SM, (2011) A unique horizontal gene transfer event has provided the octocoral mitochondrial genome with an active mismatch repair gene that has potential for an unusual selfcontained function. BMC Evolutionary Biology 11: 228.
    • (2011) BMC Evolutionary Biology , vol.11 , pp. 228
    • Bilewitch, J.P.1    Degnan, S.M.2
  • 53
    • 0000377318 scopus 로고    scopus 로고
    • Analysis of variation in mitochondrial DNA sequences (ND3, ND4L, MSH) among Octocorallia (= Alcyonaria)(Cnidaria: Anthozoa)
    • France SC, Hoover LL, (2001) Analysis of variation in mitochondrial DNA sequences (ND3, ND4L, MSH) among Octocorallia (= Alcyonaria)(Cnidaria: Anthozoa). Bulletin of the Biological Society of Washington 10: 110-118.
    • (2001) Bulletin of the Biological Society of Washington , vol.10 , pp. 110-118
    • France, S.C.1    Hoover, L.L.2
  • 54
    • 0036492637 scopus 로고    scopus 로고
    • DNA sequences of the mitochondrial COI gene have low levels of divergence among deep-sea octocorals (Cnidaria: Anthozoa)
    • France SC, Hoover LL, (2002) DNA sequences of the mitochondrial COI gene have low levels of divergence among deep-sea octocorals (Cnidaria: Anthozoa). Hydrobiologia 471: 149-155.
    • (2002) Hydrobiologia , vol.471 , pp. 149-155
    • France, S.C.1    Hoover, L.L.2
  • 55
    • 33746285615 scopus 로고    scopus 로고
    • Evaluation of the utility of COI and ITS markers as tools for population genetic studies of temperate gorgonians
    • Calderon I, Garrabou J, Aurelle D, (2006) Evaluation of the utility of COI and ITS markers as tools for population genetic studies of temperate gorgonians. Journal of Experimental Marine Biology and Ecology 336: 184-197.
    • (2006) Journal of Experimental Marine Biology and Ecology , vol.336 , pp. 184-197
    • Calderon, I.1    Garrabou, J.2    Aurelle, D.3
  • 56
    • 19944388287 scopus 로고    scopus 로고
    • Variation in coding (NADH dehydrogenase subunits 2, 3, and 6) and noncoding intergenic spacer regions of the mitochondrial genome in Octocorallia (Cnidaria: Anthozoa)
    • McFadden CS, Tullis LD, Hutchinson MB, Winner K, Sohm JA, (2004) Variation in coding (NADH dehydrogenase subunits 2, 3, and 6) and noncoding intergenic spacer regions of the mitochondrial genome in Octocorallia (Cnidaria: Anthozoa). Marine Biotechnology 6: 516-526.
    • (2004) Marine Biotechnology , vol.6 , pp. 516-526
    • McFadden, C.S.1    Tullis, L.D.2    Hutchinson, M.B.3    Winner, K.4    Sohm, J.A.5
  • 57
    • 77149156309 scopus 로고    scopus 로고
    • Molecular systematics of the bubblegum coral genera (Paragorgiidae, Octocorallia) and description of a new deep-sea species
    • Herrera S, Baco A, Sánchez JA, (2010) Molecular systematics of the bubblegum coral genera (Paragorgiidae, Octocorallia) and description of a new deep-sea species. Molecular Phylogenetics and Evolution 55: 123-135.
    • (2010) Molecular Phylogenetics and Evolution , vol.55 , pp. 123-135
    • Herrera, S.1    Baco, A.2    Sánchez, J.A.3
  • 58
    • 50249152906 scopus 로고    scopus 로고
    • The mitochondrial genome of a deep-sea bamboo coral (Cnidaria, Anthozoa, Octocorallia, Isididae): Genome structure and putative origins of replication are not conserved among octocorals
    • Brugler MR, France SC, (2008) The mitochondrial genome of a deep-sea bamboo coral (Cnidaria, Anthozoa, Octocorallia, Isididae): Genome structure and putative origins of replication are not conserved among octocorals. Journal of Molecular Evolution 67: 125-136.
    • (2008) Journal of Molecular Evolution , vol.67 , pp. 125-136
    • Brugler, M.R.1    France, S.C.2
  • 59
    • 0038277003 scopus 로고    scopus 로고
    • Molecular phylogenetic analyses of shallow-water Caribbean octocorals
    • Sánchez JA, McFadden CS, France SC, Lasker HR, (2003) Molecular phylogenetic analyses of shallow-water Caribbean octocorals. Marine Biology 142: 975-987.
    • (2003) Marine Biology , vol.142 , pp. 975-987
    • Sánchez, J.A.1    McFadden, C.S.2    France, S.C.3    Lasker, H.R.4
  • 60
    • 0028149366 scopus 로고
    • Convenient single-step, one tube purification of PCR products for direct sequencing
    • Werle E, Schneider C, Renner M, Volker M, Fiehn W, (1994) Convenient single-step, one tube purification of PCR products for direct sequencing. Nucleic Acids Research 22: 4354-4355.
    • (1994) Nucleic Acids Research , vol.22 , pp. 4354-4355
    • Werle, E.1    Schneider, C.2    Renner, M.3    Volker, M.4    Fiehn, W.5
  • 61
    • 0037100671 scopus 로고    scopus 로고
    • MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
    • Katoh K, Misawa K, Kuma Ki, Miyata T, (2002) MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Research 30: 3059-3066.
    • (2002) Nucleic Acids Research , vol.30 , pp. 3059-3066
    • Katoh, K.1    Misawa, K.2    Kuma, K.3    Miyata, T.4
  • 62
    • 45949107473 scopus 로고    scopus 로고
    • Recent developments in the MAFFT multiple sequence alignment program
    • Katoh K, Toh H, (2008) Recent developments in the MAFFT multiple sequence alignment program. Briefings in Bioinformatics 9: 286-298.
    • (2008) Briefings in Bioinformatics , vol.9 , pp. 286-298
    • Katoh, K.1    Toh, H.2
  • 63
    • 77954272855 scopus 로고    scopus 로고
    • TranslatorX: multiple alignment of nucleotide sequences guided by amino acid translations
    • Abascal F, Zardoya R, Telford MJ, (2010) TranslatorX: multiple alignment of nucleotide sequences guided by amino acid translations. Nucleic Acids Research 38.
    • (2010) Nucleic Acids Research , vol.38
    • Abascal, F.1    Zardoya, R.2    Telford, M.J.3
  • 64
    • 1042304216 scopus 로고    scopus 로고
    • APE: analyses of phylogenetics and evolution in R language
    • Paradis E, Claude J, Strimmer K, (2004) APE: analyses of phylogenetics and evolution in R language. Bioinformatics 20: 289-290.
    • (2004) Bioinformatics , vol.20 , pp. 289-290
    • Paradis, E.1    Claude, J.2    Strimmer, K.3
  • 65
    • 84863304598 scopus 로고    scopus 로고
    • R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria
    • R Development Core Team, URL
    • R Development Core Team (2012) R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria. URL http://www.R-project.org. ISBN 3-900051-07-0.
    • (2012)
  • 66
    • 0034043778 scopus 로고    scopus 로고
    • Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
    • Castresana J, (2000) Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Molecular Biology and Evolution 17: 540-552.
    • (2000) Molecular Biology and Evolution , vol.17 , pp. 540-552
    • Castresana, J.1
  • 67
    • 34547489084 scopus 로고    scopus 로고
    • Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments
    • Talavera G, Castresana J, (2007) Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments. Systematic Biology 56: 564-577.
    • (2007) Systematic Biology , vol.56 , pp. 564-577
    • Talavera, G.1    Castresana, J.2
  • 68
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, et al. (2011) MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution 28: 2731-2739.
    • (2011) Molecular Biology and Evolution , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5
  • 69
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon S, Gascuel O, (2003) A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Systematic Biology 52: 696-704.
    • (2003) Systematic Biology , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 70
    • 45849154165 scopus 로고    scopus 로고
    • jModelTest: Phylogenetic model averaging
    • Posada D, (2008) jModelTest: Phylogenetic model averaging. Molecular Biology and Evolution 25: 1253-1256.
    • (2008) Molecular Biology and Evolution , vol.25 , pp. 1253-1256
    • Posada, D.1
  • 71
    • 0034849408 scopus 로고    scopus 로고
    • MrBayes: Bayesian inference of phylogenetic trees
    • Huelsenbeck JP, Ronquist F, (2001) MrBayes: Bayesian inference of phylogenetic trees. Bioinformatics 17: 754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 72
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F, Huelsenbeck JP, (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572-1574.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 73
    • 79551690052 scopus 로고    scopus 로고
    • The CIPRES Portals. CIPRES. 2009-08-04
    • URL sections/portal
    • Miller M, Holder M, Vos R, Midford P, Liebowitz T, et al. (2011) The CIPRES Portals. CIPRES. 2009-08-04. URL http://www.phylo.org/sub sections/portal.
    • (2011)
    • Miller, M.1    Holder, M.2    Vos, R.3    Midford, P.4    Liebowitz, T.5
  • 75
    • 69949152362 scopus 로고    scopus 로고
    • A quarter-century of deep-sea malacological exploration in the South and West Pacific: Where do we stand? How far to go?
    • In: Héros V, Cowie RH, Bouchet P, Editors
    • Bouchet P, Héros V, Lozouet P, Maestrati P, (2008) A quarter-century of deep-sea malacological exploration in the South and West Pacific: Where do we stand? How far to go? In: Héros V, Cowie RH, Bouchet P, editors, Tropical Deep-Sea Benthos 25. volume 196, 9-40.
    • (2008) Tropical Deep-Sea Benthos 25 , vol.196 , pp. 9-40
    • Bouchet, P.1    Héros, V.2    Lozouet, P.3    Maestrati, P.4
  • 76
    • 0024241467 scopus 로고
    • The characterization of enzymatically amplified eukaryotic 16S-like rRNA-coding regions
    • Medlin L, Elwood HJ, Stickel S, Sogin ML, (1988) The characterization of enzymatically amplified eukaryotic 16S-like rRNA-coding regions. Gene 71: 491-9.
    • (1988) Gene , vol.71 , pp. 491-499
    • Medlin, L.1    Elwood, H.J.2    Stickel, S.3    Sogin, M.L.4
  • 77
    • 0033174344 scopus 로고    scopus 로고
    • Higher level relationships of leeches (Annelida: Clitellata: Euhirudinea) based on morphology and gene sequences
    • Apakupakul K, Siddall ME, Burreson EM, (1999) Higher level relationships of leeches (Annelida: Clitellata: Euhirudinea) based on morphology and gene sequences. Molecular Phylogenetics and Evolution 12: 350-9.
    • (1999) Molecular Phylogenetics and Evolution , vol.12 , pp. 350-359
    • Apakupakul, K.1    Siddall, M.E.2    Burreson, E.M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.