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Volumn 422, Issue 4, 2012, Pages 716-720

Preferential binding of IFI16 protein to cruciform structure and superhelical DNA

Author keywords

DNA binding; IFI16 protein; Protein DNA complex

Indexed keywords

AGAROSE; ALPHA INTERFERON; BRCA1 PROTEIN; CRUCIFORM DNA; DNA BINDING PROTEIN; GAMMA INTERFERON INDUCIBLE PROTEIN IFI 16; OLIGONUCLEOTIDE; PLASMID DNA; PROTEIN P53; TRANSCRIPTION FACTOR; TUMOR SUPPRESSOR PROTEIN; UNCLASSIFIED DRUG;

EID: 84862279094     PISSN: 0006291X     EISSN: 10902104     Source Type: Journal    
DOI: 10.1016/j.bbrc.2012.05.065     Document Type: Article
Times cited : (56)

References (43)
  • 1
    • 56949087428 scopus 로고    scopus 로고
    • P204, a p200 family protein, as a multifunctional regulator of cell proliferation and differentiation
    • Luan Y., Lengyel P., Liu C.J. P204, a p200 family protein, as a multifunctional regulator of cell proliferation and differentiation. Cytokine Growth Factor Rev. 2008, 19:357-369.
    • (2008) Cytokine Growth Factor Rev. , vol.19 , pp. 357-369
    • Luan, Y.1    Lengyel, P.2    Liu, C.J.3
  • 3
    • 0028899996 scopus 로고
    • IFI 16 gene encodes a nuclear protein whose expression is induced by interferons in human myeloid leukemia cell lines
    • Dawson M.J., Trapani J.A. IFI 16 gene encodes a nuclear protein whose expression is induced by interferons in human myeloid leukemia cell lines. J. Cell Biochem. 1995, 57:39-51.
    • (1995) J. Cell Biochem. , vol.57 , pp. 39-51
    • Dawson, M.J.1    Trapani, J.A.2
  • 4
    • 0032809592 scopus 로고    scopus 로고
    • Transcription and growth regulatory functions of the HIN-200 family of proteins
    • Johnstone R.W., Trapani J.A. Transcription and growth regulatory functions of the HIN-200 family of proteins. Mol. Cell. Biol. 1999, 19:5833-5838.
    • (1999) Mol. Cell. Biol. , vol.19 , pp. 5833-5838
    • Johnstone, R.W.1    Trapani, J.A.2
  • 7
    • 0028130529 scopus 로고
    • Genomic organization of IFI16, an interferon-inducible gene whose expression is associated with human myeloid cell differentiation: correlation of predicted protein domains with exon organization
    • Trapani J.A., Dawson M., Apostolidis V.A., Browne K.A. Genomic organization of IFI16, an interferon-inducible gene whose expression is associated with human myeloid cell differentiation: correlation of predicted protein domains with exon organization. Immunogenetics 1994, 40:415-424.
    • (1994) Immunogenetics , vol.40 , pp. 415-424
    • Trapani, J.A.1    Dawson, M.2    Apostolidis, V.A.3    Browne, K.A.4
  • 9
    • 0142071787 scopus 로고    scopus 로고
    • IFI16 as a negative regulator in the regulation of p53 and p21(Waf1)
    • Kwak J.C., Ongusaha P.P., Ouchi T., Lee S.W. IFI16 as a negative regulator in the regulation of p53 and p21(Waf1). J. Biol. Chem. 2003, 278:40899-40904.
    • (2003) J. Biol. Chem. , vol.278 , pp. 40899-40904
    • Kwak, J.C.1    Ongusaha, P.P.2    Ouchi, T.3    Lee, S.W.4
  • 10
    • 0032479176 scopus 로고    scopus 로고
    • The human interferon-inducible protein, IFI 16, is a repressor of transcription
    • Johnstone R.W., Kerry J.A., Trapani J.A. The human interferon-inducible protein, IFI 16, is a repressor of transcription. J. Biol. Chem. 1998, 273:17172-17177.
    • (1998) J. Biol. Chem. , vol.273 , pp. 17172-17177
    • Johnstone, R.W.1    Kerry, J.A.2    Trapani, J.A.3
  • 12
    • 84857364644 scopus 로고    scopus 로고
    • DNA-responsive inflammasomes and their regulators in autoimmunity
    • Choubey D. DNA-responsive inflammasomes and their regulators in autoimmunity. Clin. Immunol. 2012, 142:223-231.
    • (2012) Clin. Immunol. , vol.142 , pp. 223-231
    • Choubey, D.1
  • 13
    • 84655165036 scopus 로고    scopus 로고
    • Interferon-inducible p200-family protein IFI16, an innate immune sensor for cytosolic and nuclear double-stranded DNA: regulation of subcellular localization
    • Veeranki S., Choubey D. Interferon-inducible p200-family protein IFI16, an innate immune sensor for cytosolic and nuclear double-stranded DNA: regulation of subcellular localization. Mol. Immunol. 2012, 49:567-571.
    • (2012) Mol. Immunol. , vol.49 , pp. 567-571
    • Veeranki, S.1    Choubey, D.2
  • 15
    • 0034619772 scopus 로고    scopus 로고
    • Functional interaction between p53 and the interferon-inducible nucleoprotein IFI 16
    • Johnstone R.W., Wei W., Greenway A., Trapani J.A. Functional interaction between p53 and the interferon-inducible nucleoprotein IFI 16. Oncogene 2000, 19:6033-6042.
    • (2000) Oncogene , vol.19 , pp. 6033-6042
    • Johnstone, R.W.1    Wei, W.2    Greenway, A.3    Trapani, J.A.4
  • 16
    • 38449122879 scopus 로고    scopus 로고
    • Role of IFI16 in DNA damage and checkpoint
    • Ouchi M., Ouchi T. Role of IFI16 in DNA damage and checkpoint. Front. Biosci. 2008, 13:236-239.
    • (2008) Front. Biosci. , vol.13 , pp. 236-239
    • Ouchi, M.1    Ouchi, T.2
  • 18
    • 43549097098 scopus 로고    scopus 로고
    • DNA topology influences p53 sequence-specific DNA binding through structural transitions within the target sites
    • Jagelska E.B., Brazda V., Pecinka P., Palecek E., Fojta M. DNA topology influences p53 sequence-specific DNA binding through structural transitions within the target sites. Biochem. J. 2008, 412:57-63.
    • (2008) Biochem. J. , vol.412 , pp. 57-63
    • Jagelska, E.B.1    Brazda, V.2    Pecinka, P.3    Palecek, E.4    Fojta, M.5
  • 19
    • 73949090549 scopus 로고    scopus 로고
    • The potential of the cruciform structure formation as an important factor influencing p53 sequence-specific binding to natural DNA targets
    • Jagelska E.B., Pivonkova H., Fojta M., Brazda V. The potential of the cruciform structure formation as an important factor influencing p53 sequence-specific binding to natural DNA targets. Biochem. Biophys. Res. Commun. 2010, 391:1409-1414.
    • (2010) Biochem. Biophys. Res. Commun. , vol.391 , pp. 1409-1414
    • Jagelska, E.B.1    Pivonkova, H.2    Fojta, M.3    Brazda, V.4
  • 20
    • 0037064013 scopus 로고    scopus 로고
    • The 14-3-3 protein homologues from Saccharomyces cerevisiae, Bmh1p and Bmh2p, have cruciform DNA-binding activity and associate in vivo with ARS307
    • Callejo M., Alvarez D., Price G.B., Zannis-Hadjopoulos M. The 14-3-3 protein homologues from Saccharomyces cerevisiae, Bmh1p and Bmh2p, have cruciform DNA-binding activity and associate in vivo with ARS307. J. Biol. Chem. 2002, 277:38416-38423.
    • (2002) J. Biol. Chem. , vol.277 , pp. 38416-38423
    • Callejo, M.1    Alvarez, D.2    Price, G.B.3    Zannis-Hadjopoulos, M.4
  • 21
    • 37749024291 scopus 로고    scopus 로고
    • 14-3-3 cruciform-binding proteins as regulators of eukaryotic DNA replication
    • Zannis-Hadjopoulos M., Yahyaoui W., Callejo M. 14-3-3 cruciform-binding proteins as regulators of eukaryotic DNA replication. Trends Biochem. Sci. 2008, 33:44-50.
    • (2008) Trends Biochem. Sci. , vol.33 , pp. 44-50
    • Zannis-Hadjopoulos, M.1    Yahyaoui, W.2    Callejo, M.3
  • 22
    • 79961111848 scopus 로고    scopus 로고
    • Cruciform structures are a common DNA feature important for regulating biological processes
    • Brazda V., Laister R.C., Jagelska E.B., Arrowsmith C. Cruciform structures are a common DNA feature important for regulating biological processes. BMC Mol. Biol. 2011, 12:33.
    • (2011) BMC Mol. Biol. , vol.12 , pp. 33
    • Brazda, V.1    Laister, R.C.2    Jagelska, E.B.3    Arrowsmith, C.4
  • 23
    • 0031460030 scopus 로고    scopus 로고
    • DNA topology: topoisomerases keep it simple
    • Bates A.D., Maxwell A. DNA topology: topoisomerases keep it simple. Curr. Biol. 1997, 7:R778-R781.
    • (1997) Curr. Biol. , vol.7
    • Bates, A.D.1    Maxwell, A.2
  • 25
    • 0033578826 scopus 로고    scopus 로고
    • Preferential binding of tumor suppressor p53 to positively or negatively supercoiled DNA involves the C-terminal domain
    • Mazur S.J., Sakaguchi K., Appella E., Wang X.W., Harris C.C., Bohr V.A. Preferential binding of tumor suppressor p53 to positively or negatively supercoiled DNA involves the C-terminal domain. J. Mol. Biol. 1999, 292:241-249.
    • (1999) J. Mol. Biol. , vol.292 , pp. 241-249
    • Mazur, S.J.1    Sakaguchi, K.2    Appella, E.3    Wang, X.W.4    Harris, C.C.5    Bohr, V.A.6
  • 26
    • 0028140665 scopus 로고
    • Unusual DNA structures, chromatin and transcription
    • van Holde K., Zlatanova J. Unusual DNA structures, chromatin and transcription. Bioessays 1994, 16:59-68.
    • (1994) Bioessays , vol.16 , pp. 59-68
    • van Holde, K.1    Zlatanova, J.2
  • 29
    • 33750531043 scopus 로고    scopus 로고
    • Restoring wild-type conformation and DNA-binding activity of mutant p53 is insufficient for restoration of transcriptional activity
    • Brazda V., Muller P., Brozkova K., Vojtesek B. Restoring wild-type conformation and DNA-binding activity of mutant p53 is insufficient for restoration of transcriptional activity. Biochem. Biophys. Res. Commun. 2006, 351:499-506.
    • (2006) Biochem. Biophys. Res. Commun. , vol.351 , pp. 499-506
    • Brazda, V.1    Muller, P.2    Brozkova, K.3    Vojtesek, B.4
  • 32
    • 0033518119 scopus 로고    scopus 로고
    • Influence of promoter DNA topology on sequence-specific DNA binding and transactivation by tumor suppressor p53
    • Kim E., Rohaly G., Heinrichs S., Gimnopoulos D., Meissner H., Deppert W. Influence of promoter DNA topology on sequence-specific DNA binding and transactivation by tumor suppressor p53. Oncogene 1999, 18:7310-7318.
    • (1999) Oncogene , vol.18 , pp. 7310-7318
    • Kim, E.1    Rohaly, G.2    Heinrichs, S.3    Gimnopoulos, D.4    Meissner, H.5    Deppert, W.6
  • 33
    • 33646809388 scopus 로고    scopus 로고
    • The versatile interactions of p53 with DNA: when flexibility serves specificity
    • Kim E., Deppert W. The versatile interactions of p53 with DNA: when flexibility serves specificity. Cell Death Differ. 2006, 13:885-889.
    • (2006) Cell Death Differ. , vol.13 , pp. 885-889
    • Kim, E.1    Deppert, W.2
  • 34
    • 48749129213 scopus 로고    scopus 로고
    • Analysis of the DNA binding activity of BRCA1 and its modulation by the tumour suppressor p53
    • Naseem R., Webb M. Analysis of the DNA binding activity of BRCA1 and its modulation by the tumour suppressor p53. PLoS One 2008, 3:e2336.
    • (2008) PLoS One , vol.3
    • Naseem, R.1    Webb, M.2
  • 36
    • 77958566202 scopus 로고    scopus 로고
    • USP7/HAUSP promotes the sequence-specific DNA binding activity of p53
    • Sarkari F., Sheng Y., Frappier L. USP7/HAUSP promotes the sequence-specific DNA binding activity of p53. PLoS One 2010, 5:e13040.
    • (2010) PLoS One , vol.5
    • Sarkari, F.1    Sheng, Y.2    Frappier, L.3
  • 37
    • 33947265929 scopus 로고    scopus 로고
    • A common topology for bacterial and eukaryotic transcription initiation?
    • Travers A., Muskhelishvili G. A common topology for bacterial and eukaryotic transcription initiation?. EMBO Rep. 2007, 8:147-151.
    • (2007) EMBO Rep. , vol.8 , pp. 147-151
    • Travers, A.1    Muskhelishvili, G.2
  • 38
    • 33646249820 scopus 로고    scopus 로고
    • Mapping and conformational characterization of the DNA-binding region of the breast cancer susceptibility protein BRCA1
    • Naseem R., Sturdy A., Finch D., Jowitt T., Webb M. Mapping and conformational characterization of the DNA-binding region of the breast cancer susceptibility protein BRCA1. Biochem. J. 2006, 395:529-535.
    • (2006) Biochem. J. , vol.395 , pp. 529-535
    • Naseem, R.1    Sturdy, A.2    Finch, D.3    Jowitt, T.4    Webb, M.5
  • 39
    • 34548596829 scopus 로고    scopus 로고
    • HMGB1 interacts with human topoisomerase IIalpha and stimulates its catalytic activity
    • Stros M., Bacikova A., Polanska E., Stokrova J., Strauss F. HMGB1 interacts with human topoisomerase IIalpha and stimulates its catalytic activity. Nucleic Acids Res. 2007, 35:5001-5013.
    • (2007) Nucleic Acids Res. , vol.35 , pp. 5001-5013
    • Stros, M.1    Bacikova, A.2    Polanska, E.3    Stokrova, J.4    Strauss, F.5
  • 41
    • 0012690768 scopus 로고    scopus 로고
    • Transcription factor as a topological homeostat
    • Muskhelishvili G., Travers A. Transcription factor as a topological homeostat. Front. Biosci. 2003, 8:d279-d285.
    • (2003) Front. Biosci. , vol.8
    • Muskhelishvili, G.1    Travers, A.2
  • 42
    • 0343775742 scopus 로고    scopus 로고
    • Specific modulation of p53 binding to consensus sequence within supercoiled DNA by monoclonal antibodies
    • Brazda V., Palecek J., Pospisilova S., Vojtesek B., Palecek E. Specific modulation of p53 binding to consensus sequence within supercoiled DNA by monoclonal antibodies. Biochem. Biophys. Res. Commun. 2000, 267:934-939.
    • (2000) Biochem. Biophys. Res. Commun. , vol.267 , pp. 934-939
    • Brazda, V.1    Palecek, J.2    Pospisilova, S.3    Vojtesek, B.4    Palecek, E.5
  • 43
    • 34250637192 scopus 로고    scopus 로고
    • Sequence analysis of p53 response-elements suggests multiple binding modes of the p53 tetramer to DNA targets
    • Ma B., Pan Y., Zheng J., Levine A.J., Nussinov R. Sequence analysis of p53 response-elements suggests multiple binding modes of the p53 tetramer to DNA targets. Nucleic Acids Res. 2007, 35:2986-3001.
    • (2007) Nucleic Acids Res. , vol.35 , pp. 2986-3001
    • Ma, B.1    Pan, Y.2    Zheng, J.3    Levine, A.J.4    Nussinov, R.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.