YeastMine-An integrated data warehouse for Saccharomyces cerevisiae data as a multipurpose tool-kit

Database

Volumn 2012, Issue , 2012, Pages

  Balakrishnan, Rama ^a   Park, Julie ^a   Karra, Kalpana ^a   Hitz, Benjamin C ^a   Binkley, Gail ^a   Hong, Eurie L ^a   Sullivan, Julie ^b   Micklem, Gos ^b   Cherry, J Michael ^a  

^a STANFORD UNIVERSITY   (United States)

^b UNIVERSITY OF CAMBRIDGE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

SACCHAROMYCES; SACCHAROMYCES CEREVISIAE; SACCHAROMYCETALES;

ARTICLE; COMPUTER INTERFACE; DATA BASE; FUNGAL GENOME; GENETIC DATABASE; GENETICS; INTERNET; SACCHAROMYCES CEREVISIAE;

DATABASE MANAGEMENT SYSTEMS; DATABASES, GENETIC; GENOME, FUNGAL; INTERNET; SACCHAROMYCES CEREVISIAE; USER-COMPUTER INTERFACE;

EID: 84862262073     PISSN: 17580463     EISSN: None     Source Type: Journal    
DOI: 10.1093/database/bar062     Document Type: Article

References (8)

1. Cherry, J.M., Hong, E.L., Amundsen, C. et al. (2011) Saccharomyces Genome Database: The genomics resource of budding yeast. Nucleic Acids Res., November 2011 (doi: 10.1093/nar/gkr1029; epub ahead of print).
2. Lyne, R., Smith, R., Rutherford, K. et al. (2007) FlyMine: An integrated database for Drosophila and Anopheles genomics. Genome Biol., 8, R129.
3. Chen, Y.A., Tripathi, L.P. and Mizuguchi, K. (2011) TargetMine, an integrated data warehouse for candidate gene prioritisation and target discovery. PLoS One, 6, e17844.
4. Hong, E.L., Balakrishnan, R., Dong, Q. et al. (2008) Gene Ontology annotations at SGD: New data sources and annotation methods. Nucleic Acids Res., 36(Database issue), D577-D581. (Pubitemid 351149788)
5. Ruan, J., Li, H., Chen, Z. et al. (2008) TreeFam: 2008 Update. Nucleic Acids Res., 36(Database issue), D735-D740. (Pubitemid 351149816)
6. Hibbs, M.A., Hess, D.C., Myers, C.L. et al. (2007) Exploring the functional landscape of gene expression: Directed search of large microarray compendia. Bioinformatics, 23, 2692-2699. (Pubitemid 350048333)
7. Giardine, B., Riemer, C., Hardison, R.C. et al. (2005) Galaxy: A platform for interactive large-scale genome analysis. Genome Res., 15, 1451-1455. (Pubitemid 41400913)
8. Skrzypek, M.S. and Hirschman, J. (2011) Using the Saccharomyces Genome Database (SGD) for analysis of genomic information. Curr. Protoc. Bioinform., Chapter 1, Unit1.20.