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Volumn 12, Issue SUPPL. 3, 2011, Pages

Perfect Hamming code with a hash table for faster genome mapping

Author keywords

[No Author keywords available]

Indexed keywords

ACCELERATION TECHNIQUE; CODE-WORDS; COMPUTATION TIME; FAST ALGORITHMS; GALOIS EXTENSION; GENOME MAPPING; GROWING DEMAND; HAMMING CODE; HASH TABLE; KEY TECHNOLOGIES; LIMITED CAPACITY; SUFFIX ARRAYS;

EID: 84862258282     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1186/1471-2164-12-S3-S8     Document Type: Conference Paper
Times cited : (6)

References (14)
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    • Pearson, W.R.1    Lipman, D.J.2
  • 4
    • 55549097836 scopus 로고    scopus 로고
    • Mapping short DNA sequencing reads and calling variants using mapping quality scores
    • Li H, Durbin R: Mapping short DNA sequencing reads and calling variants using mapping quality scores. Genome Research 2008, 18(11):1851-1858.
    • (2008) Genome Research , vol.18 , Issue.11 , pp. 1851-1858
    • Li, H.1    Durbin, R.2
  • 5
    • 40049104732 scopus 로고    scopus 로고
    • SOAP: Short oligonucleotide alignment program
    • Li R, Kristiansen K, Wang J: SOAP: short oligonucleotide alignment program. Bioinformatics 2008, 24(5):713-714.
    • (2008) Bioinformatics , vol.24 , Issue.5 , pp. 713-714
    • Li, R.1    Kristiansen, K.2    Wang, J.3
  • 8
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memoryefficient alignment of short DNA sequences to the human genome
    • Langmead B, Trapnell C, Pop M, Salzberg SL: Ultrafast and memoryefficient alignment of short DNA sequences to the human genome. Genome Biology 2009, 10(3):R25.
    • (2009) Genome Biology , vol.10 , Issue.3
    • Langmead, B.1    Trapnell, C.2    Pop, M.3    Salzberg, S.L.4
  • 9
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows- Wheeler transform
    • Li H, Durbin R: Fast and accurate short read alignment with Burrows- Wheeler transform. Bioinformatics 2009, 25(14):1754-1760.
    • (2009) Bioinformatics , vol.25 , Issue.14 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 12
    • 84871628734 scopus 로고    scopus 로고
    • second edition. First MIT Press; Ito K, second
    • Encycropedic Dictionary of Mathematics, second edition. First MIT Press; Ito K, second 1996:.
    • (1996) Encycropedic Dictionary of Mathematics
  • 13
    • 84871637569 scopus 로고    scopus 로고
    • Frequency enmeration of DNA subsequences from large-scale sequences using linear code
    • Takenaka Y, Matsuda H: Frequency enmeration of DNA subsequences from large-scale sequences using linear code. Proceeding of 11th Intl. conf. ISMB 2003, B-59.
    • (2003) Proceeding of 11th Intl. Conf. ISMB
    • Takenaka, Y.1    Matsuda, H.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.