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Volumn 231, Issue 16, 2012, Pages 5542-5556

Proper orthogonal decomposition of atomistic flow simulations

Author keywords

Coupled continuum atomistic simulations; Data processing; Dissipative particle dynamics; Ensemble average; Molecular dynamics; Multi scale simulations; Non stationary process

Indexed keywords

DATA HANDLING; DISSIPATIVE PARTICLE DYNAMICS; EIGENVALUES AND EIGENFUNCTIONS; PRINCIPAL COMPONENT ANALYSIS;

EID: 84862251512     PISSN: 00219991     EISSN: 10902716     Source Type: Journal    
DOI: 10.1016/j.jcp.2012.05.007     Document Type: Article
Times cited : (15)

References (20)
  • 1
    • 77952404209 scopus 로고    scopus 로고
    • Enhanced sampling in well-tempered esemble
    • Bonomi M., Parrinello M. Enhanced sampling in well-tempered esemble. Phys. Rev. Lett. 2010, 104:190602.
    • (2010) Phys. Rev. Lett. , vol.104 , pp. 190602
    • Bonomi, M.1    Parrinello, M.2
  • 2
    • 16844364042 scopus 로고    scopus 로고
    • Hybrid atomistic-continuum method for the simulation of dense fluid flows
    • Werder T., Walther J.H., Koumoutsakos P. Hybrid atomistic-continuum method for the simulation of dense fluid flows. J. Comput. Phys. 2005, 205:373-390.
    • (2005) J. Comput. Phys. , vol.205 , pp. 373-390
    • Werder, T.1    Walther, J.H.2    Koumoutsakos, P.3
  • 4
    • 33746336982 scopus 로고    scopus 로고
    • On proper orthogonal decomposition of randomly perturbed fields with applications to flow past a cylinder and natural convection over a horizontal plate
    • Venturi D. On proper orthogonal decomposition of randomly perturbed fields with applications to flow past a cylinder and natural convection over a horizontal plate. J. Fluid Mech. 2006, 559:215-254.
    • (2006) J. Fluid Mech. , vol.559 , pp. 215-254
    • Venturi, D.1
  • 5
    • 17144410761 scopus 로고    scopus 로고
    • Thermostat algorithms for molecular dynamics simulations
    • Hunenberger P.H. Thermostat algorithms for molecular dynamics simulations. Adv. Polym. Sci. 2005, 173:105-149.
    • (2005) Adv. Polym. Sci. , vol.173 , pp. 105-149
    • Hunenberger, P.H.1
  • 6
    • 34547809547 scopus 로고
    • A unified formulation of the constant temperature molecular dynamics methods
    • Nosé S. A unified formulation of the constant temperature molecular dynamics methods. J. Chem. Phys. 1984, 81:511.
    • (1984) J. Chem. Phys. , vol.81 , pp. 511
    • Nosé, S.1
  • 7
    • 0001538909 scopus 로고
    • Canonical dynamics: equilibrium phase-space distributions
    • Hoover W.G. Canonical dynamics: equilibrium phase-space distributions. Phys. Rev. A 1985, 31:1695-1697.
    • (1985) Phys. Rev. A , vol.31 , pp. 1695-1697
    • Hoover, W.G.1
  • 8
    • 36749107785 scopus 로고
    • Molecular dynamics simulations at constant pressure and/or temperature
    • Andersen H.C. Molecular dynamics simulations at constant pressure and/or temperature. J. Chem. Phys. 1980, 72:2384-2393.
    • (1980) J. Chem. Phys. , vol.72 , pp. 2384-2393
    • Andersen, H.C.1
  • 9
    • 84956259119 scopus 로고
    • Statistical-mechanics of dissipative particle dynamics
    • Espanol P., Warren P. Statistical-mechanics of dissipative particle dynamics. Europhys. Lett. 1995, 30(4):191-196.
    • (1995) Europhys. Lett. , vol.30 , Issue.4 , pp. 191-196
    • Espanol, P.1    Warren, P.2
  • 10
    • 0346304855 scopus 로고    scopus 로고
    • Dissipative particle dynamics: a useful thermostat for equilibrium and nonequilibrium molecular dynamics simulations
    • Soddemann T., Dünweg B., Kremer K. Dissipative particle dynamics: a useful thermostat for equilibrium and nonequilibrium molecular dynamics simulations. Phys. Rev. E 2003, 68:046702.
    • (2003) Phys. Rev. E , vol.68 , pp. 046702
    • Soddemann, T.1    Dünweg, B.2    Kremer, K.3
  • 11
    • 84950109965 scopus 로고
    • Simulating microscopic hydrodynamic phenomena with dissipative particle dynamics
    • Hoogerburgge P.J., Koelman J.M. Simulating microscopic hydrodynamic phenomena with dissipative particle dynamics. Europhys. Lett. 1992, 19:155-160.
    • (1992) Europhys. Lett. , vol.19 , pp. 155-160
    • Hoogerburgge, P.J.1    Koelman, J.M.2
  • 12
    • 77249155208 scopus 로고    scopus 로고
    • Direct construction of mesoscopic models from microscopic simulations
    • Lei H., Karniadakis G.E. Direct construction of mesoscopic models from microscopic simulations. Phys. Rev. E 2010, 81:026704.
    • (2010) Phys. Rev. E , vol.81 , pp. 026704
    • Lei, H.1    Karniadakis, G.E.2
  • 13
    • 0000246863 scopus 로고
    • Turbulence and dynamics of coherent structures: I-III
    • Sirovich L. Turbulence and dynamics of coherent structures: I-III. Quart. Appl. Math. 1987, 45:561-590.
    • (1987) Quart. Appl. Math. , vol.45 , pp. 561-590
    • Sirovich, L.1
  • 14
    • 70349656326 scopus 로고    scopus 로고
    • Analyzing transient turbulence in a stenosed carotid artery by proper orthogonal decomposition
    • Grinberg L., Yakhot A., Karniadakis G.E. Analyzing transient turbulence in a stenosed carotid artery by proper orthogonal decomposition. Ann. Biomed. Eng. 2009, 37(11):2200-2217.
    • (2009) Ann. Biomed. Eng. , vol.37 , Issue.11 , pp. 2200-2217
    • Grinberg, L.1    Yakhot, A.2    Karniadakis, G.E.3
  • 15
    • 0002467378 scopus 로고
    • Fast parallel algorithms for short-range molecular dynamics
    • Plimpton S.J. Fast parallel algorithms for short-range molecular dynamics. J. Comput. Phys. 1995, 117:1-19.
    • (1995) J. Comput. Phys. , vol.117 , pp. 1-19
    • Plimpton, S.J.1
  • 16
    • 77952786405 scopus 로고    scopus 로고
    • A multiscale red blood cell model with accurate mechanics, rheology and dynamics
    • Fedosov D., Caswell B., Karniadakis G.E. A multiscale red blood cell model with accurate mechanics, rheology and dynamics. Biophys. J. 2010, 98:2215-2225.
    • (2010) Biophys. J. , vol.98 , pp. 2215-2225
    • Fedosov, D.1    Caswell, B.2    Karniadakis, G.E.3
  • 20
    • 55849131031 scopus 로고    scopus 로고
    • Nonreflecting boundaries for ultrasound in fluctuating hydrodynamics of open systems
    • Delgado-Buscalioni R., Dejoan A. Nonreflecting boundaries for ultrasound in fluctuating hydrodynamics of open systems. Phys. Rev. E 2008, 78:046708.
    • (2008) Phys. Rev. E , vol.78 , pp. 046708
    • Delgado-Buscalioni, R.1    Dejoan, A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.