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Volumn 70, Issue 6, 2012, Pages 991-1003

Small RNAs containing the pathogenic determinant of a chloroplast- replicating viroid guide the degradation of a host mRNA as predicted by RNA silencing

Author keywords

chloroplast development; heat shock protein 90; non coding RNAs; PLMVd; RNA silencing; viroid pathogenesis

Indexed keywords

CHLOROPLAST DEVELOPMENT; HEAT-SHOCK PROTEIN; NON-CODING RNAS; PLMVD; RNA SILENCING; VIROID PATHOGENESIS;

EID: 84862223028     PISSN: 09607412     EISSN: 1365313X     Source Type: Journal    
DOI: 10.1111/j.1365-313X.2012.04940.x     Document Type: Article
Times cited : (182)

References (71)
  • 1
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
    • DOI 10.1093/nar/25.17.3389
    • Altschul, S.F., Madden, T.L., Schaffer, A.A., Zhang, J., Zhang, Z., Miller, W., and, Lipman, D.J., (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25, 3389-3402. (Pubitemid 27359211)
    • (1997) Nucleic Acids Research , vol.25 , Issue.17 , pp. 3389-3402
    • Altschul, S.F.1    Madden, T.L.2    Schaffer, A.A.3    Zhang, J.4    Zhang, Z.5    Miller, W.6    Lipman, D.J.7
  • 2
    • 0031872109 scopus 로고    scopus 로고
    • Genomic structure of three phenotypically different isolates of peach latent mosaic viroid: Implications of the existence of constraints limiting the heterogeneity of viroid quasispecies
    • Ambrõs, S., Hernández, C., Desvignes, J.C., and, Flores, R., (1998) Genomic structure of three phenotypically different isolates of peach latent mosaic viroid: implications of the existence of constraints limiting the heterogeneity of viroid quasi-species. J. Virol. 72, 7397-7406. (Pubitemid 28377871)
    • (1998) Journal of Virology , vol.72 , Issue.9 , pp. 7397-7406
    • Ambros, S.1    Hernandez, C.2    Desvignes, J.C.3    Flores, R.4
  • 3
    • 0345540644 scopus 로고    scopus 로고
    • Rapid generation of genetic heterogeneity in progenies from individual cDNA clones of peach latent mosaic viroid in its natural host
    • Ambrõs, S., Hernández, C., and, Flores, R., (1999) Rapid generation of genetic heterogeneity in progenies from individual cDNA clones of peach latent mosaic viroid in its natural host. J. Gen. Virol. 80, 2239-2252. (Pubitemid 29389163)
    • (1999) Journal of General Virology , vol.80 , Issue.8 , pp. 2239-2252
    • Ambros, S.1    Hernandez, C.2    Flores, R.3
  • 4
    • 77649154330 scopus 로고    scopus 로고
    • In-depth sequencing of the siRNAs associated with peach latent mosaic viroid infection
    • Bolduc, F., Hoareau, C., St-Pierre, P., and, Perreault, J.P., (2010) In-depth sequencing of the siRNAs associated with peach latent mosaic viroid infection. BMC Mol. Biol. 11, 16.
    • (2010) BMC Mol. Biol. , vol.11 , pp. 16
    • Bolduc, F.1    Hoareau, C.2    St-Pierre, P.3    Perreault, J.P.4
  • 5
    • 0242422453 scopus 로고    scopus 로고
    • Subcellular localization and rolling circle replication of peach latent mosaic viroid: Hallmarks of group A viroids
    • Bussière, F., Lehoux, J., Thompson, D.A., Skrzeczkowski, L.J., and, Perreault, J., (1999) Subcellular localization and rolling circle replication of peach latent mosaic viroid: hallmarks of group A viroids. J. Virol. 73, 6353-6360. (Pubitemid 29327812)
    • (1999) Journal of Virology , vol.73 , Issue.8 , pp. 6353-6360
    • Bussiere, F.1    Lehoux, J.2    Thompson, D.A.3    Skrzeczkowski, L.J.4    Perreault, J.-P.5
  • 6
    • 0346034697 scopus 로고    scopus 로고
    • The chlorate-resistant and photomorphogenesis-defective mutant cr88 encodes a chloroplast-targeted HSP90
    • DOI 10.1046/j.1365-313X.2003.016011.x
    • Cao, D., Froehlich, J.E., Zhang, H., and, Cheng, C.L., (2003) The chlorate-resistant and photomorphogenesis-defective mutant cr88 encodes a chloroplast-targeted HSP90. Plant J. 33, 107-118. (Pubitemid 36117293)
    • (2003) Plant Journal , vol.33 , Issue.1 , pp. 107-118
    • Cao, D.1    Froehlich, J.E.2    Zhang, H.3    Cheng, C.-L.4
  • 7
    • 37849007348 scopus 로고    scopus 로고
    • Double-stranded RNA interferes in a sequence-specific manner with infection of representative members of the two viroid families
    • Carbonell, A., Martínez de Alba, A.E., Flores, R., and, Gago, S., (2008) Double-stranded RNA interferes in a sequence-specific manner with infection of representative members of the two viroid families. Virology, 371, 44-53.
    • (2008) Virology , vol.371 , pp. 44-53
    • Carbonell, A.1    Martínez De Alba, A.E.2    Flores, R.3    Gago, S.4
  • 8
    • 60149088848 scopus 로고    scopus 로고
    • Origins and Mechanisms of miRNAs and siRNAs
    • Carthew, R.W., and, Sontheimer, E.J., (2009) Origins and Mechanisms of miRNAs and siRNAs. Cell, 136, 642-655.
    • (2009) Cell , vol.136 , pp. 642-655
    • Carthew, R.W.1    Sontheimer, E.J.2
  • 9
    • 70350227275 scopus 로고    scopus 로고
    • Small RNAs and their roles in plant development
    • Chen, X., (2009) Small RNAs and their roles in plant development. Annu. Rev. Cell Dev. Biol. 25, 21-44.
    • (2009) Annu. Rev. Cell Dev. Biol. , vol.25 , pp. 21-44
    • Chen, X.1
  • 10
    • 33746660802 scopus 로고    scopus 로고
    • Comparative genomics and evolution of the HSP90 family of genes across all kingdoms of organisms
    • Chen, B., Zhong, D., and, Monteiro, A., (2006) Comparative genomics and evolution of the HSP90 family of genes across all kingdoms of organisms. BMC Genomics, 7, 156.
    • (2006) BMC Genomics , vol.7 , pp. 156
    • Chen, B.1    Zhong, D.2    Monteiro, A.3
  • 11
  • 12
    • 0033578389 scopus 로고    scopus 로고
    • Mapping the molecular determinant of pathogenicity in a hammerhead viroid: A tetraloop within the in vivo branched RNA conformation
    • DOI 10.1073/pnas.96.17.9960
    • De la Peña, M., Navarro, B., and, Flores, R., (1999) Mapping the molecular determinant of pathogenicity in a hammerhead viroid: a tetraloop within the in vivo branched RNA conformation. Proc. Natl Acad. Sci. USA, 96, 9960-9965. (Pubitemid 29398840)
    • (1999) Proceedings of the National Academy of Sciences of the United States of America , vol.96 , Issue.17 , pp. 9960-9965
    • De La Pena, M.1    Navarro, B.2    Flores, R.3
  • 13
    • 70449562093 scopus 로고    scopus 로고
    • Deep sequencing of the small RNAs derived from two symptomatic variants of a chloroplastic viroid: Implications for their genesis and for pathogenesis
    • Di Serio, F., Gisel, A., Navarro, B., Delgado, S., Martínez de Alba, A.E., Donvito, G., and, Flores, R., (2009) Deep sequencing of the small RNAs derived from two symptomatic variants of a chloroplastic viroid: implications for their genesis and for pathogenesis. PLoS ONE, 4, e7539.
    • (2009) PLoS ONE , vol.4
    • Di Serio, F.1    Gisel, A.2    Navarro, B.3    Delgado, S.4    Martínez De Alba, A.E.5    Donvito, G.6    Flores, R.7
  • 14
    • 77649205597 scopus 로고    scopus 로고
    • RNA-dependent RNA polymerase 6 delays accumulation and precludes meristem invasion of a nuclear-replicating viroid
    • Di Serio, F., Martínez de Alba, A.E., Navarro, B., Gisel, A., and, Flores, R., (2010) RNA-dependent RNA polymerase 6 delays accumulation and precludes meristem invasion of a nuclear-replicating viroid. J. Virol. 84, 2477-2489.
    • (2010) J. Virol. , vol.84 , pp. 2477-2489
    • Di Serio, F.1    Martínez De Alba, A.E.2    Navarro, B.3    Gisel, A.4    Flores, R.5
  • 15
    • 0015428911 scopus 로고
    • Potato spindle tuber viroid. VIII. Correlation of infectivity with a UV-absorbing component and thermal denaturation properties of the RNA
    • Diener, T.O., (1972) Potato spindle tuber viroid. VIII. Correlation of infectivity with a UV-absorbing component and thermal denaturation properties of the RNA. Virology, 50, 606-609.
    • (1972) Virology , vol.50 , pp. 606-609
    • Diener, T.O.1
  • 16
    • 79952516216 scopus 로고    scopus 로고
    • Characterization of plant miRNAs and small RNAs derived from potato spindle tuber viroid (PSTVd) in infected tomato
    • Diermann, N., Matoušek, J., Junge, M., Riesner, D., and, Steger, G., (2010) Characterization of plant miRNAs and small RNAs derived from potato spindle tuber viroid (PSTVd) in infected tomato. Biol. Chem. 391, 1379-1390.
    • (2010) Biol. Chem. , vol.391 , pp. 1379-1390
    • Diermann, N.1    Matoušek, J.2    Junge, M.3    Riesner, D.4    Steger, G.5
  • 17
    • 70350220614 scopus 로고    scopus 로고
    • The biology of viroid-host interactions
    • Ding, B., (2009) The biology of viroid-host interactions. Annu. Rev. Phytopathol. 47, 105-131.
    • (2009) Annu. Rev. Phytopathol. , vol.47 , pp. 105-131
    • Ding, B.1
  • 18
    • 77956170809 scopus 로고    scopus 로고
    • RNA-based antiviral immunity
    • Ding, S.W., (2010) RNA-based antiviral immunity. Nat. Rev. Immunol. 10, 632-644.
    • (2010) Nat. Rev. Immunol. , vol.10 , pp. 632-644
    • Ding, S.W.1
  • 19
    • 70549111201 scopus 로고    scopus 로고
    • Movement of RNA silencing between plant cells: Is the question now behind us?
    • Dunoyer, P., and, Voinnet, O., (2009) Movement of RNA silencing between plant cells: is the question now behind us? Trends Plant Sci. 14, 643-644.
    • (2009) Trends Plant Sci. , vol.14 , pp. 643-644
    • Dunoyer, P.1    Voinnet, O.2
  • 20
    • 0032935861 scopus 로고    scopus 로고
    • ChloroP, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites
    • Emanuelsson, O., Nielsen, H., and, von Heijne, G., (1999) ChloroP, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites. Protein Sci. 8, 978-984. (Pubitemid 29211735)
    • (1999) Protein Science , vol.8 , Issue.5 , pp. 978-984
    • Emanuelsson, O.1    Nielsen, H.2    Von Heijne, G.3
  • 21
  • 22
    • 0034575895 scopus 로고    scopus 로고
    • The Avsunviroidae family: Viroids with hammerhead ribozymes
    • Flores, R., Darõs., J.A., and, Hernández, C., (2000) The Avsunviroidae family: viroids with hammerhead ribozymes. Adv. Virus Res. 55, 271-323.
    • (2000) Adv. Virus Res. , vol.55 , pp. 271-323
    • Flores, R.1    Darõs, J.A.2    Hernández, C.3
  • 25
    • 0002389587 scopus 로고    scopus 로고
    • Polyvalent detection of fruit tree tricho, capillo and foveaviruses by nested RT-PCR using degenerated and inosine containing primers (PDO RT-PCR)
    • Foissac, X., Svanella-Dumas, L., Dulucq, M.J., Gentit, P., and, Candresse, T., (2001) Polyvalent detection of fruit tree tricho, capillo and foveaviruses by nested RT-PCR using degenerated and inosine containing primers (PDO RT-PCR). Acta Hortic. 550, 37-43.
    • (2001) Acta Hortic. , vol.550 , pp. 37-43
    • Foissac, X.1    Svanella-Dumas, L.2    Dulucq, M.J.3    Gentit, P.4    Candresse, T.5
  • 26
    • 22244451704 scopus 로고    scopus 로고
    • A kissing-loop interaction in a hammerhead viroid RNA critical for its in vitro folding and in vivo viability
    • DOI 10.1261/rna.2230605
    • Gago, S., De la Peña, M., and, Flores, R., (2005) A kissing-loop interaction in a hammerhead viroid RNA critical for its in vitro folding and in vivo viability. RNA, 11, 1073-1083. (Pubitemid 40994188)
    • (2005) RNA , vol.11 , Issue.7 , pp. 1073-1083
    • Gago, S.1    De La Pena, M.2    Flores, R.3
  • 27
    • 62149152282 scopus 로고    scopus 로고
    • Extremely high mutation rate of a hammerhead viroid
    • Gago, S., Elena, S.F., Flores, R., and, Sanjuán, R., (2009) Extremely high mutation rate of a hammerhead viroid. Science, 323, 1308.
    • (2009) Science , vol.323 , pp. 1308
    • Gago, S.1    Elena, S.F.2    Flores, R.3    Sanjuán, R.4
  • 28
    • 55549113227 scopus 로고    scopus 로고
    • Viroid-induced symptoms in Nicotiana benthamiana plants are dependent on RDR6 activity
    • DOI 10.1104/pp.108.120808
    • Gõmez, G., Martínez, G., and, Pallás, V., (2008) Viroid-induced symptoms in Nicotiana benthamiana plants are dependent on RDR6 activity. Plant Physiol. 148, 414-423. (Pubitemid 352847616)
    • (2008) Plant Physiology , vol.148 , Issue.1 , pp. 414-423
    • Gomez, G.1    Martinez, G.2    Pallas, V.3
  • 29
    • 0017821271 scopus 로고
    • Nucleotide sequence and secondary structure of potato spindle tuber viroid
    • DOI 10.1038/273203a0
    • Gross, H.J., Domdey, H., Lossow, C., Jank, P., Raba, M., Alberty, H., and, Sänger, H.L., (1978) Nucleotide sequence and secondary structure of potato spindle tuber viroid. Nature, 273, 203-208. (Pubitemid 8331704)
    • (1978) Nature , vol.273 , Issue.5659 , pp. 203-208
    • Gross, H.J.1    Domdey, H.2    Lossow, C.3
  • 30
    • 0026538051 scopus 로고
    • Plus and minus RNAs of peach latent mosaic viroid self-cleave in vitro through hammerhead structures
    • Hernández, C., and, Flores, R., (1992) Plus and minus RNAs of peach latent mosaic viroid self-cleave in vitro through hammerhead structures. Proc. Natl Acad. Sci. USA, 89, 3711-3715.
    • (1992) Proc. Natl Acad. Sci. USA , vol.89 , pp. 3711-3715
    • Hernández, C.1    Flores, R.2
  • 31
    • 79959937256 scopus 로고    scopus 로고
    • Satellite RNA reduces expression of the 2b suppressor protein resulting in the attenuation of symptoms caused by cucumber mosaic virus infection
    • Hou, W.N., Duan, C.G., Fang, R.X., Zhou, X.Y., and, Guo, H.S., (2011) Satellite RNA reduces expression of the 2b suppressor protein resulting in the attenuation of symptoms caused by cucumber mosaic virus infection. Mol. Plant Pathol. 12, 595-605.
    • (2011) Mol. Plant Pathol. , vol.12 , pp. 595-605
    • Hou, W.N.1    Duan, C.G.2    Fang, R.X.3    Zhou, X.Y.4    Guo, H.S.5
  • 32
    • 0023047510 scopus 로고
    • Self-cleavage of plus and minus RNA transcripts of avocado sunblotch viroid
    • Hutchins, C., Rathjen, P.D., Forster, A.C., and, Symons, R.H., (1986) Self-cleavage of plus and minus RNA transcripts of avocado sunblotch viroid. Nucleic Acids Res. 14, 3627-3640.
    • (1986) Nucleic Acids Res. , vol.14 , pp. 3627-3640
    • Hutchins, C.1    Rathjen, P.D.2    Forster, A.C.3    Symons, R.H.4
  • 34
    • 0036800818 scopus 로고    scopus 로고
    • Potato spindle tuber viroid strains of different pathogenicity induces and suppresses expression of common and unique genes in infected tomato
    • Itaya, A., Matsuda, Y., Gonzales, R.A., Nelson, R.S., and, Ding, B., (2002) Potato spindle tuber viroid strains of different pathogenicity induces and suppresses expression of common and unique genes in infected tomato. Mol. Plant-Microbe Interact. 15, 990-999. (Pubitemid 35211752)
    • (2002) Molecular Plant-Microbe Interactions , vol.15 , Issue.10 , pp. 990-999
    • Itaya, A.1    Matsuda, Y.2    Gonzales, R.A.3    Nelson, R.S.4    Ding, B.5
  • 35
    • 33947372982 scopus 로고    scopus 로고
    • A structured viroid RNA serves as a substrate for dicer-like cleavage to produce biologically active small RNAs but is resistant to RNA-induced silencing complex-mediated degradation
    • DOI 10.1128/JVI.02339-06
    • Itaya, A., Zhong, X., Bundschuh, R., Qi, Y., Wang, Y., Takeda, R., Harris, A.R., Molina, C., Nelson, R.S., and, Ding, B., (2007) A structured viroid RNA is substrate for Dicer-like cleavage to produce biologically active small RNAs but is resistant to RISC-mediated degradation. J. Virol. 81, 2980-2994. (Pubitemid 46447061)
    • (2007) Journal of Virology , vol.81 , Issue.6 , pp. 2980-2994
    • Itaya, A.1    Zhong, X.2    Bundschuh, R.3    Qi, Y.4    Wang, Y.5    Takeda, R.6    Harris, A.R.7    Molina, C.8    Nelson, R.S.9    Ding, B.10
  • 36
    • 79958047255 scopus 로고    scopus 로고
    • Misregulation of AUXIN RESPONSE FACTOR 8 underlies the developmental abnormalities caused by three distinct viral silencing suppressors in Arabidopsis
    • Jay, F., Wang, Y., Yu, A., Taconnat, L., Pelletier, S., Colot, V., Renou, J.P., and, Voinnet, O., (2011) Misregulation of AUXIN RESPONSE FACTOR 8 underlies the developmental abnormalities caused by three distinct viral silencing suppressors in Arabidopsis. PLoS Pathog. 7, e1002035.
    • (2011) PLoS Pathog. , vol.7
    • Jay, F.1    Wang, Y.2    Yu, A.3    Taconnat, L.4    Pelletier, S.5    Colot, V.6    Renou, J.P.7    Voinnet, O.8
  • 37
    • 0037320231 scopus 로고    scopus 로고
    • P1/HC-Pro, a viral suppressor of RNA silencing, interferes with Arabidopsis development and miRNA function
    • DOI 10.1016/S1534-5807(03)00025-X, PII S153458070300025X
    • Kasschau, K.D., Xie, Z., Allen, E., Llave, C., Chapman, E.J., Krizan, K.A., and, Carrington, J.C., (2003) P1/HC-Pro, a viral suppressor of RNA silencing, interferes with Arabidopsis development and miRNA unction. Dev. Cell, 4, 205-217. (Pubitemid 36221797)
    • (2003) Developmental Cell , vol.4 , Issue.2 , pp. 205-217
    • Kasschau, K.D.1    Xie, Z.2    Allen, E.3    Llave, C.4    Chapman, E.J.5    Krizan, K.A.6    Carrington, J.C.7
  • 38
    • 77952506871 scopus 로고    scopus 로고
    • Protein transport into chloroplasts
    • Li, H.M., and, Chiu, C.C., (2010) Protein transport into chloroplasts. Annu. Rev. Plant Biol. 61, 157-180.
    • (2010) Annu. Rev. Plant Biol. , vol.61 , pp. 157-180
    • Li, H.M.1    Chiu, C.C.2
  • 39
    • 78649630855 scopus 로고    scopus 로고
    • Virus-derived small interfering RNAs at the core of plant-virus interactions
    • Llave, C., (2010) Virus-derived small interfering RNAs at the core of plant-virus interactions. Trends Plant Sci. 15, 701-707.
    • (2010) Trends Plant Sci. , vol.15 , pp. 701-707
    • Llave, C.1
  • 40
    • 0042887667 scopus 로고    scopus 로고
    • Peach latent mosaic viroid variants inducing peach calico (extreme chlorosis) contain a characteristic insertion that is responsible for this symptomatology
    • DOI 10.1016/S0042-6822(03)00315-5
    • Malfitano, M., Di Serio, F., Covelli, L., Ragozzino, A., Hernández, C., and, Flores, R., (2003) Peach latent mosaic viroid variants inducing peach calico contain a characteristic insertion that is responsible for this symptomatology. Virology, 313, 492-501. (Pubitemid 37040689)
    • (2003) Virology , vol.313 , Issue.2 , pp. 492-501
    • Malfitano, M.1    Di Serio, F.2    Covelli, L.3    Ragozzino, A.4    Hernandez, C.5    Flores, R.6
  • 41
    • 79551640033 scopus 로고    scopus 로고
    • Form, function, and regulation of ARGONAUTE proteins
    • Mallory, A., and, Vaucheret, H., (2010) Form, function, and regulation of ARGONAUTE proteins. Plant Cell, 22, 3879-3889.
    • (2010) Plant Cell , vol.22 , pp. 3879-3889
    • Mallory, A.1    Vaucheret, H.2
  • 42
    • 4444363152 scopus 로고    scopus 로고
    • MicroRNA control of PHABULOSA in leaf development: Importance of pairing to the microRNA 5′ region
    • DOI 10.1038/sj.emboj.7600340
    • Mallory, A.C., Reinhart, B.J., Jones-Rhoades, M.W., Tang, G., Zamore, P.D., Barton, M.K., and, Bartel, D.P., (2004) MicroRNA control of PHABULOSA in leaf development: importance of pairing to the microRNA 5' region. EMBO J. 23, 3356-3364. (Pubitemid 39209159)
    • (2004) EMBO Journal , vol.23 , Issue.16 , pp. 3356-3364
    • Mallory, A.C.1    Reinhart, B.J.2    Jones-Rhoades, M.W.3    Tang, G.4    Zamore, P.D.5    Barton, M.K.6    Bartel, D.P.7
  • 43
    • 1042302387 scopus 로고    scopus 로고
    • RNA silencing as related to viroid induced symptom expression
    • DOI 10.1007/s00705-003-0215-5
    • Markarian, N., Li, H.W., Ding, S.W., and, Semancik, J.S., (2004) RNA silencing as related to viroid induced symptom expression. Arch. Virol. 149, 397-406. (Pubitemid 38192686)
    • (2004) Archives of Virology , vol.149 , Issue.2 , pp. 397-406
    • Markarian, N.1    Li, H.W.2    Ding, S.W.3    Semancik, J.S.4
  • 44
    • 0036892510 scopus 로고    scopus 로고
    • Two chloroplastic viroids induce the accumulation of small RNAs associated with posttranscriptional gene silencing
    • DOI 10.1128/JVI.76.24.13094-13096.2002
    • Martínez de Alba, A.E., Flores, R., and, Hernández, C., (2002) Two chloroplastic viroids induce the accumulation of the small RNAs associated with post-transcriptional gene silencing. J. Virol. 76, 13094-13096. (Pubitemid 35386996)
    • (2002) Journal of Virology , vol.76 , Issue.24 , pp. 13094-13096
    • Martinez De Alba, A.E.1    Flores, R.2    Hernandez, C.3
  • 45
    • 77953035621 scopus 로고    scopus 로고
    • High-throughput sequencing of Hop stunt viroid-derived small RNAs from cucumber leaves and phloem
    • Martínez, G., Donaire, L., Llave, C., Pallás, V., and, Gõmez, G., (2010) High-throughput sequencing of Hop stunt viroid-derived small RNAs from cucumber leaves and phloem. Mol. Plant Pathol. 11, 347-359.
    • (2010) Mol. Plant Pathol. , vol.11 , pp. 347-359
    • Martínez, G.1    Donaire, L.2    Llave, C.3    Pallás, V.4    Gõmez, G.5
  • 46
    • 33846166403 scopus 로고    scopus 로고
    • Accumulation of viroid-specific small RNAs and increase in nucleolytic activities linked to viroid-caused pathogenesis
    • DOI 10.1515/BC.2007.001
    • Matoušek, J., Kozlová, P., Orctová, L., Schmitz, A., Pesina, K., Bannach, O., Diermann, N., Steger, G., and, Riesner, D., (2007) Accumulation of viroid-specific small RNAs and increase of nucleolytic activities linked to viroid-caused pathogenesis. Biol. Chem. 388, 1-13. (Pubitemid 46090168)
    • (2007) Biological Chemistry , vol.388 , Issue.1 , pp. 1-13
    • Matousek, J.1    Kozlova, P.2    Orctova, L.3    Schmitz, A.4    Pesina, K.5    Bannach, O.6    Diermann, N.7    Steger, G.8    Riesner, D.9
  • 48
    • 0037352446 scopus 로고    scopus 로고
    • Structural and functional analysis of the middle segment of Hsp90: Implications for ATP hydrolysis and client protein and cochaperone interactions
    • DOI 10.1016/S1097-2765(03)00065-0
    • Meyer, P., Prodromou, C., Hu, B., Vaughan, C., Roe, S.M., Panaretou, B., Piper, P.W., and, Pearl, L.H., (2003) Structural and functional analysis of the middle segment of hsp90: implications for ATP hydrolysis and client protein and cochaperone interactions. Mol. Cell, 11, 647-658. (Pubitemid 36385120)
    • (2003) Molecular Cell , vol.11 , Issue.3 , pp. 647-658
    • Meyer, P.1    Prodromou, C.2    Hu, B.3    Vaughan, C.4    Roe, S.M.5    Panaretou, B.6    Piper, P.W.7    Pearl, L.H.8
  • 49
    • 33845864469 scopus 로고    scopus 로고
    • RNA silencing of host transcripts by cauliflower mosaic virus requires coordinated action of the four Arabidopsis Dicer-like proteins
    • DOI 10.1073/pnas.0604627103
    • Moissiard, G., and, Voinnet, O., (2006) RNA silencing of host transcripts by cauliflower mosaic virus requires coordinated action of the four Arabidopsis Dicer-like proteins. Proc. Natl Acad. Sci. USA, 103, 19593-19598. (Pubitemid 46026075)
    • (2006) Proceedings of the National Academy of Sciences of the United States of America , vol.103 , Issue.51 , pp. 19593-19598
    • Moissiard, G.1    Voinnet, O.2
  • 50
    • 0030851810 scopus 로고    scopus 로고
    • Chrysanthemum chlorotic mottle viroid: Unusual structural properties of a subgroup of self-cleaving viroids with hammerhead ribozymes
    • DOI 10.1073/pnas.94.21.11262
    • Navarro, B., and, Flores, R., (1997) Chrysanthemum chlorotic mottle viroid: unusual structural properties of a subgroup of self-cleaving viroids with hammerhead ribozymes. Proc. Natl Acad. Sci. USA, 94, 11262-11267. (Pubitemid 27450986)
    • (1997) Proceedings of the National Academy of Sciences of the United States of America , vol.94 , Issue.21 , pp. 11262-11267
    • Navarro, B.1    Flores, R.2
  • 51
    • 70450214042 scopus 로고    scopus 로고
    • Deep sequencing of viroid-derived small RNAs from grapevine provides new insights on the role of RNA silencing in plant-viroid interaction
    • Navarro, B., Pantaleo, V., Gisel, A., Moxon, S., Dalmay, T., Bisztray, G., Di Serio, F., and, Burgyan, J., (2009) Deep sequencing of viroid-derived small RNAs from grapevine provides new insights on the role of RNA silencing in plant-viroid interaction. PLoS ONE, 4, e7686.
    • (2009) PLoS ONE , vol.4
    • Navarro, B.1    Pantaleo, V.2    Gisel, A.3    Moxon, S.4    Dalmay, T.5    Bisztray, G.6    Di Serio, F.7    Burgyan, J.8
  • 52
    • 0035368867 scopus 로고    scopus 로고
    • Replicating potato spindle tuber viroid RNA is accompanied by short RNA fragments that are characteristic of post-transcriptional gene silencing
    • Papaefthimiou, I., Hamilton, A.J., Denti, M.A., Baulcombe, D.C., Tsagris, M., and, Tabler, M., (2001) Replicating potato spindle tuber viroid RNA is accompanied by short RNA fragments that are characteristic of post-transcriptional gene silencing. Nucleic Acids Res. 29, 2395-2400. (Pubitemid 32514942)
    • (2001) Nucleic Acids Research , vol.29 , Issue.11 , pp. 2395-2400
    • Papaefthimiou, I.1    Hamilton, A.2    Denti, M.3    Baulcombe, D.4    Tsagris, M.5    Tabler, M.6
  • 53
    • 4644237189 scopus 로고    scopus 로고
    • Fast and effective prediction of microRNA/target duplexes
    • DOI 10.1261/rna.5248604
    • Rehmsmeier, M., Steffen, P., Höchsmann, M., and, Giegerich, R., (2004) Fast and effective prediction of microRNA/target duplexes. RNA, 10, 1507-1517. (Pubitemid 39288185)
    • (2004) RNA , vol.10 , Issue.10 , pp. 1507-1517
    • Rehmsmeier, M.1    Steffen, P.2    Hochsmann, M.3    Giegerich, R.4
  • 54
    • 30344431506 scopus 로고    scopus 로고
    • Variants of Peach latent mosaic viroid inducing peach calico: Uneven distribution in infected plants and requirements of the insertion containing the pathogenecity determinant
    • DOI 10.1099/vir.0.81356-0
    • Rodio, M.E., Delgado, S., Flores, R., and, Di Serio, F., (2006) Variants of peach latent mosaic viroid inducing peach calico: uneven distribution in infected plants and requirements of the insertion containing the pathogenicity determinant. J. Gen. Virol. 87, 231-240. (Pubitemid 43056962)
    • (2006) Journal of General Virology , vol.87 , Issue.1 , pp. 231-240
    • Rodio, M.-E.1    Delgado, S.2    Flores, R.3    Di Serio, F.4
  • 55
    • 37849005023 scopus 로고    scopus 로고
    • A viroid RNA with a specific structural motif inhibits chloroplast development
    • Rodio, M.E., Delgado, S., De Stradis, A.E., Gõmez, M.D., Flores, R., and, Di Serio, F., (2007) A viroid RNA with a specific structural motif inhibits chloroplast development. Plant Cell, 19, 3610-3626.
    • (2007) Plant Cell , vol.19 , pp. 3610-3626
    • Rodio, M.E.1    Delgado, S.2    De Stradis, A.E.3    Gõmez, M.D.4    Flores, R.5    Di Serio, F.6
  • 56
    • 0030087795 scopus 로고    scopus 로고
    • Characterization of a plastid-specific HSP90 homologue: Identification of a cDNA sequence, phylogenetic descendence and analysis of its mRNA and protein expression
    • Schmitz, G., Schmidt, M., and, Feierabend, J., (1996) Characterization of a plastid-specific HSP90 homologue: identification of a cDNA sequence, phylogenetic descendence and analysis of its mRNA and protein expression. Plant Mol. Biol. 30, 479-492. (Pubitemid 3040073)
    • (1996) Plant Molecular Biology , vol.30 , Issue.3 , pp. 479-492
    • Schmitz, G.1    Schmidt, M.2    Feierabend, J.3
  • 57
    • 64949202330 scopus 로고    scopus 로고
    • A 'foldosome' in the chloroplast?
    • Schroda, M., and, Mühlhaus, T., (2009) A 'foldosome' in the chloroplast? Plant Signal Behav. 4, 301-303.
    • (2009) Plant Signal Behav. , vol.4 , pp. 301-303
    • Schroda, M.1    Mühlhaus, T.2
  • 58
    • 67449108522 scopus 로고    scopus 로고
    • RNAi-mediated resistance to potato spindle tuber viroid in transgenic tomato expressing a viroid hairpin RNA construct
    • Schwind, N., Zwiebel, M., Itaya, A., Ding, B., Wang, M.B., Krczal, G., and, Wassenegger, M., (2009) RNAi-mediated resistance to potato spindle tuber viroid in transgenic tomato expressing a viroid hairpin RNA construct. Mol. Plant Pathol. 10, 459-469.
    • (2009) Mol. Plant Pathol. , vol.10 , pp. 459-469
    • Schwind, N.1    Zwiebel, M.2    Itaya, A.3    Ding, B.4    Wang, M.B.5    Krczal, G.6    Wassenegger, M.7
  • 59
    • 79958045463 scopus 로고    scopus 로고
    • A viral satellite RNA induces yellow symptoms on tobacco by targeting a gene involved in chlorophyll biosynthesis using the RNA silencing machinery
    • Shimura, H., Pantaleo, V., Ishihara, T., Myojo, N., Inaba, J., Sueda, K., Burgyán, J., and, Masuta, C., (2011) A viral satellite RNA induces yellow symptoms on tobacco by targeting a gene involved in chlorophyll biosynthesis using the RNA silencing machinery. PLoS Pathog. 7, e1002021.
    • (2011) PLoS Pathog. , vol.7
    • Shimura, H.1    Pantaleo, V.2    Ishihara, T.3    Myojo, N.4    Inaba, J.5    Sueda, K.6    Burgyán, J.7    Masuta, C.8
  • 60
    • 79958041002 scopus 로고    scopus 로고
    • Viral small interfering RNAs target host genes to mediate disease symptoms in plants
    • Smith, N.A., Eamens, A.L., and, Wang, M.B., (2011) Viral small interfering RNAs target host genes to mediate disease symptoms in plants. PLoS Pathog. 7, e1002022.
    • (2011) PLoS Pathog. , vol.7
    • Smith, N.A.1    Eamens, A.L.2    Wang, M.B.3
  • 61
    • 58149119365 scopus 로고    scopus 로고
    • Characterization of the siRNAs associated with peach latent mosaic viroid infection
    • St-Pierre, P., Hassen, F., Thompson, D., and, Perreault, J.P., (2009) Characterization of the siRNAs associated with peach latent mosaic viroid infection. Virology, 383, 178-182.
    • (2009) Virology , vol.383 , pp. 178-182
    • St-Pierre, P.1    Hassen, F.2    Thompson, D.3    Perreault, J.P.4
  • 62
    • 0019878340 scopus 로고
    • Avocado sunblotch viroid: Primary sequence and proposed secondary structure
    • Symons, R.H., (1981) Avocado sunblotch viroid: primary sequence and proposed secondary structure. Nucleic Acids Res. 9, 6527-6537.
    • (1981) Nucleic Acids Res. , vol.9 , pp. 6527-6537
    • Symons, R.H.1
  • 64
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J.D., Higgins, D.G., and, Gibson, T.J., (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22, 4673-4680. (Pubitemid 24354800)
    • (1994) Nucleic Acids Research , vol.22 , Issue.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 66
    • 1842587524 scopus 로고    scopus 로고
    • Viroid-induced RNA silencing of GFP-viroid fusion transgenes does not induce extensive spreading of methylation or transitive silencing
    • DOI 10.1111/j.1365-313X.2004.02029.x
    • Vogt, U., Pelissier, T., Putz, A., Razvi, F., Fischer, R., and, Wassenegger, M., (2004) Viroid-induced RNA silencing of GFP-viroid fusion transgenes does not induce extensive spreading of methylation or transitive silencing. Plant J. 1, 107-118. (Pubitemid 38448448)
    • (2004) Plant Journal , vol.38 , Issue.1 , pp. 107-118
    • Vogt, U.1    Pelissier, T.2    Putz, A.3    Razvi, F.4    Fischer, R.5    Wassenegger, M.6
  • 67
    • 46149095029 scopus 로고    scopus 로고
    • Use, tolerance and avoidance of amplified RNA silencing by plants
    • Voinnet, O., (2008) Use, tolerance and avoidance of amplified RNA silencing by plants. Trends Plant Sci. 13, 317-328.
    • (2008) Trends Plant Sci. , vol.13 , pp. 317-328
    • Voinnet, O.1
  • 68
    • 12144291576 scopus 로고    scopus 로고
    • On the role of RNA silencing in the pathogenicity and evolution of viroids and viral satellites
    • Wang, M.B., Bian, X.Y., Wu, L.M., et al. (2004) On the role of RNA silencing in the pathogenicity and evolution of viroids and viral satellites. Proc. Natl Acad. Sci. USA, 101, 3275-3280.
    • (2004) Proc. Natl Acad. Sci. USA , vol.101 , pp. 3275-3280
    • Wang, M.B.1    Bian, X.Y.2    Wu, L.M.3
  • 69
    • 79953101880 scopus 로고    scopus 로고
    • Accumulation of potato spindle tuber viroid-specific small RNAs is accompanied by specific changes in gene expression in two tomato cultivars
    • Wang, Y., Shibuya, M., Taneda, A., Kurauchi, T., Senda, M., Owens, R.A., and, Sano, T., (2011) Accumulation of potato spindle tuber viroid-specific small RNAs is accompanied by specific changes in gene expression in two tomato cultivars. Virology, 413, 72-83.
    • (2011) Virology , vol.413 , pp. 72-83
    • Wang, Y.1    Shibuya, M.2    Taneda, A.3    Kurauchi, T.4    Senda, M.5    Owens, R.A.6    Sano, T.7
  • 70
    • 33644666048 scopus 로고    scopus 로고
    • HEAT SHOCK PROTEIN 90C is a bona fide Hsp90 that interacts with plastidic HSP70B in Chlamydomonas reinhardtii
    • DOI 10.1104/pp.105.063578
    • Willmund, F., and, Schroda, M., (2005) HEAT SHOCK PROTEIN 90C is a bona fide Hsp90 that interacts with plastidic HSP70B in Chlamydomonas reinhardtii. Plant Physiol. 138, 2310-2322. (Pubitemid 43733572)
    • (2005) Plant Physiology , vol.138 , Issue.4 , pp. 2310-2322
    • Willmund, F.1    Schroda, M.2
  • 71
    • 57749111847 scopus 로고    scopus 로고
    • The chloroplast DnaJ homolog CDJ1 of Chlamydomonas reinhardtii is part of a multichaperone complex containing HSP70B, CGE1, and HSP90C
    • DOI 10.1104/pp.108.127944
    • Willmund, F., Dorn, K.V., Schulz-Raffelt, M., and, Schroda, M., (2008) The chloroplast DnaJ homolog CDJ1 of Chlamydomonas reinhardtii is part of a multichaperone complex containing HSP70B, CGE1, and HSP90C. Plant Physiol. 148, 2070-2082. (Pubitemid 352847460)
    • (2008) Plant Physiology , vol.148 , Issue.4 , pp. 2070-2082
    • Willmund, F.1    Dorn, K.V.2    Schulz-Raffelt, M.3    Schroda, M.4


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