Taxonomy of Ganoderma lucidum from Korea based on rDNA and partial β-Tubulin gene sequence analysis

Mycobiology

Volumn 40, Issue 1, 2012, Pages 71-75

  Park, Young Jin ^a   Kwon, O Chul ^a   Son, Eun Suk ^a   Yoon, Dae Eun ^a   Han, Woorijarang ^a   Yoo, Young Bok ^b   Lee, Chang Soo ^a  

^a Konkuk University   (South Korea)

^b Rural Development Administration   (South Korea)

Author keywords

Tubulin; Ganoderma lucidum; Internal transcribed spacer

Indexed keywords

GANODERMA; GANODERMA LUCIDUM;

EID: 84862175737     PISSN: 12298093     EISSN: 20929323     Source Type: Journal    
DOI: 10.5941/MYCO.2012.40.1.071     Document Type: Article

References (16)

1. Liu X, Yuan JP, Chung CK, Chen XJ. Antitumor activity of the sporoderm-broken germinating spores of Ganoderma lucidum. Cancer Lett 2002;182:155-61.
2. Moncalvo JM, Wang HH, Hseu RS. Phylogenetic relationships in Ganoderma inferred from the internal transcribed spacers and 25S ribosomal DNA sequences. Mycologia 1995;87:223-38.
3. Smith BJ, Sivasithamparam K. Internal transcribed spacer ribosomal DNA sequence of five species of Ganoderma from Australia. Mycol Res 2000;104:943-51.
4. Hibbett DS, Donoghue MJ. Progress towards a phylogenetic classification of the Polyporaceae through parsimony analysis of mitochondrial ribosomal sequences. Can J Bot 1995; 73(Suppl 1):S853-61.
5. Vilgalys R, Sun BL. Ancient and recent patterns of geographic speciation in the oyster mushroom Pleurotus revealed by phylogenetic analysis of ribosomal DNA sequences. Proc Natl Acad Sci U S A 1994;91:4599-603.
6. Crawford AR, Bassam BJ, Drenth A, Maclean DJ, Irwin JA. Evolutionary relationships among Phytophthora species deduced from rDNA sequence analysis. Mycol Res 1996; 100:437-43.
7. Anderson DL, Gibbs AJ, Gibson NL. Identification and phylogeny of spore-cyst fungi (Ascosphaera spp.) using ribosomal DNA sequences. Mycol Res 1998;102:541-7.
8. Chillali M, Idder-Ighili H, Guillaumin JJ, Mohammed C, Escarmant BL, Botton B. Variation in the ITS and IGS regions of ribosomal DNA among the biological species of European Armillaria. Mycol Res 1998;102:533-40.
9. Bae SC, Lee SW, Kim HJ, Park DS, Rhee IK. PCR amplification of ITS II region of rDNA for the classification of Ganoderma spp. RDA J Agric Sci 1995;37:182-8.
10. Moncalvo JM, Wang HF, Hseu RS. Gene phylogeny of the Ganoderma lucidum complex based on ribosomal sequences: comparison with traditional taxonomic characters. Mycol Res 1995;99:1489-99.
11. Thon MR, Royse DJ. Partial β-tubulin gene sequences for evolutionary studies in the Basidiomycotina. Mycologia 1999;91:468-74.
12. Cao H, But PP, Shaw PC. Methodological studies on genomic DNA extraction and purification from plant drug materials. J Chin Pharm Sci 1998;7:130-7.
13. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 2011;28:2731-9.
14. Moncalvo JM, Wang HF, Wang HH, Hseu RS. The use of rDNA nucleotide sequence data for species identification and phylogeny in the Ganodermataceae. In: Proceedings of Contributed Symposium 59A, B 5th International Mycological Congress; 1994 Aug 14-21; Vancouver, Canada. Taipei: National Taiwan University; 1995. p. 31-44.
15. Wu S, Guo X, Zhou X, Li X, Chen Y, Lin J. AFLP analysis of genetic diversity in main cultivated strains of Ganoderma spp. Afr J Biotechnol 2009;8:3448-54.
16. Zheng L, Jia D, Fei X, Luo X, Yang Z. An assessment of the genetic diversity within Ganoderma strains with AFLP and ITS PCR-RFLP. Microbiol Res 2009;164:312-21.