-
1
-
-
0028954741
-
Growth of methanotrophs in methane and oxygen counter gradients
-
Amaral, J.A., and Knowles, R. (1995) Growth of methanotrophs in methane and oxygen counter gradients. FEMS Microbiol Lett 126: 215-220.
-
(1995)
FEMS Microbiol Lett
, vol.126
, pp. 215-220
-
-
Amaral, J.A.1
Knowles, R.2
-
2
-
-
77958512852
-
Active methylotrophs in the sediments of Lonar Lake, a saline and alkaline ecosystem formed by meteor impact
-
Antony, C.P., Kumaresan, D., Ferrando, L., Boden, R., Moussard, H., Scavino, A.F., etal. (2010) Active methylotrophs in the sediments of Lonar Lake, a saline and alkaline ecosystem formed by meteor impact. ISME J 4: 1-11.
-
(2010)
ISME J
, vol.4
, pp. 1-11
-
-
Antony, C.P.1
Kumaresan, D.2
Ferrando, L.3
Boden, R.4
Moussard, H.5
Scavino, A.F.6
-
3
-
-
33748799671
-
New screening software shows that most recent large 16S rRNA gene clone libraries contain chimeras
-
Ashelford, K.E., Chuzhanova, N.A., Fry, J.C., Jones, A.J., and Weightman, A.J. (2006) New screening software shows that most recent large 16S rRNA gene clone libraries contain chimeras. Appl Environ Microbiol 72: 5734-5741.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 5734-5741
-
-
Ashelford, K.E.1
Chuzhanova, N.A.2
Fry, J.C.3
Jones, A.J.4
Weightman, A.J.5
-
4
-
-
0028594645
-
Methane oxidation activity in various soils and freshwater sediments: occurrence, charateristics, vertical profiles and distribution on grain size fractions
-
Bender, M., and Conrad, R. (1994) Methane oxidation activity in various soils and freshwater sediments: occurrence, charateristics, vertical profiles and distribution on grain size fractions. J Geophys Res 99: 16531-16540.
-
(1994)
J Geophys Res
, vol.99
, pp. 16531-16540
-
-
Bender, M.1
Conrad, R.2
-
5
-
-
27744572710
-
Methanotrophs of the psychrophilic microbial community of the Russian arctic tundra
-
Berestovskaya, Y.Y., Vasil'eva, L.V., Chestnykh, O.V., and Zavarzin, G.A. (2002) Methanotrophs of the psychrophilic microbial community of the Russian arctic tundra. Microbiology 71: 460-466.
-
(2002)
Microbiology
, vol.71
, pp. 460-466
-
-
Berestovskaya, Y.Y.1
Vasil'eva, L.V.2
Chestnykh, O.V.3
Zavarzin, G.A.4
-
7
-
-
0035458352
-
Comparison of pmoA PCR primer sets as tools for investigating methanotroph diversity in three Danish soils
-
Bourne, D.G., McDonald, I.R., and Murrell, J.C. (2001) Comparison of pmoA PCR primer sets as tools for investigating methanotroph diversity in three Danish soils. Appl Environ Microbiol 67: 3802-3809.
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 3802-3809
-
-
Bourne, D.G.1
McDonald, I.R.2
Murrell, J.C.3
-
8
-
-
0026630452
-
Use of 16s rRNA analysis to investigate phylogeny of methylotrophic bacteria
-
Bratina, B.J., Brusseau, G.A., and Hanson, R.S. (1992) Use of 16s rRNA analysis to investigate phylogeny of methylotrophic bacteria. Int J Syst Evol Microbiol 42: 645-648.
-
(1992)
Int J Syst Evol Microbiol
, vol.42
, pp. 645-648
-
-
Bratina, B.J.1
Brusseau, G.A.2
Hanson, R.S.3
-
9
-
-
84861949096
-
-
Investigation controls over methane production and bubbling from interior Alaskan lakes using stable isotopes and radiocarbon ages. MS Thesis. Fairbanks, USA: University of Alaska Fairbanks.
-
Brosius, L.S. (2010) Investigation controls over methane production and bubbling from interior Alaskan lakes using stable isotopes and radiocarbon ages. MS Thesis. Fairbanks, USA: University of Alaska Fairbanks.
-
(2010)
-
-
Brosius, L.S.1
-
10
-
-
0036025734
-
Tundra lakes and permafrost, Richards Island, western Arctic coast, Canada
-
Burn, C.R. (2002) Tundra lakes and permafrost, Richards Island, western Arctic coast, Canada. Can J Earth Sci 39: 1281-1298.
-
(2002)
Can J Earth Sci
, vol.39
, pp. 1281-1298
-
-
Burn, C.R.1
-
11
-
-
22744436213
-
Aerobic methane oxidation and methanotroph community composition during seasonal stratification in Mono Lake, California (USA)
-
Carini, S., Bano, N., LeCleir, G., and Joye, S.B. (2005) Aerobic methane oxidation and methanotroph community composition during seasonal stratification in Mono Lake, California (USA). Environ Microbiol 7: 1127-1138.
-
(2005)
Environ Microbiol
, vol.7
, pp. 1127-1138
-
-
Carini, S.1
Bano, N.2
LeCleir, G.3
Joye, S.B.4
-
12
-
-
0141571399
-
Interactions between methane oxidation and nitrification in coastal sediments
-
Carini, S.A., Orcutt, B.N., and Joye, S.B. (2003) Interactions between methane oxidation and nitrification in coastal sediments. Geomicrobiol J 20: 355-374.
-
(2003)
Geomicrobiol J
, vol.20
, pp. 355-374
-
-
Carini, S.A.1
Orcutt, B.N.2
Joye, S.B.3
-
13
-
-
33846902311
-
Nutrient amendments in soil DNA stable isotope probing experiments reduce the observed methanotroph diversity
-
Cébron, A., Bodrossy, L., Stralis-Pavese, N., Singer, A.C., Thompson, I.P., Prosser, J.I., and Murrell, J.C. (2007) Nutrient amendments in soil DNA stable isotope probing experiments reduce the observed methanotroph diversity. Appl Environ Microbiol 73: 798-807.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 798-807
-
-
Cébron, A.1
Bodrossy, L.2
Stralis-Pavese, N.3
Singer, A.C.4
Thompson, I.P.5
Prosser, J.I.6
Murrell, J.C.7
-
14
-
-
77950859287
-
When metagenomics meets stable-isotope probing: progress and perspectives
-
Chen, Y., and Murrell, J.C. (2010) When metagenomics meets stable-isotope probing: progress and perspectives. Trends Microbiol 18: 157-163.
-
(2010)
Trends Microbiol
, vol.18
, pp. 157-163
-
-
Chen, Y.1
Murrell, J.C.2
-
15
-
-
34848889783
-
Identification of active methanotrophs in a landfill cover soil through detection of expression of 16S rRNA and functional genes
-
Chen, Y., Dumont, M.G., Cébron, A., and Murrell, J.C. (2007) Identification of active methanotrophs in a landfill cover soil through detection of expression of 16S rRNA and functional genes. Environ Microbiol 9: 2855-2869.
-
(2007)
Environ Microbiol
, vol.9
, pp. 2855-2869
-
-
Chen, Y.1
Dumont, M.G.2
Cébron, A.3
Murrell, J.C.4
-
16
-
-
51649084234
-
Revealing the uncultivated majority: combining DNA stable-isotope probing, multiple displacement amplification and metagenomic analyses of uncultivated Methylocystis in acidic peatlands
-
Chen, Y., Dumont, M.G., Neufeld, J.D., Bodrossy, L., Stralis-Pavese, N., McNamara, N.P., etal. (2008) Revealing the uncultivated majority: combining DNA stable-isotope probing, multiple displacement amplification and metagenomic analyses of uncultivated Methylocystis in acidic peatlands. Environ Microbiol 10: 2609-2622.
-
(2008)
Environ Microbiol
, vol.10
, pp. 2609-2622
-
-
Chen, Y.1
Dumont, M.G.2
Neufeld, J.D.3
Bodrossy, L.4
Stralis-Pavese, N.5
McNamara, N.P.6
-
17
-
-
70349538975
-
The expanding world of methylotrophic metabolism
-
Chistoserdova, L., Kalyuzhnaya, M.G., and Lidstrom, M.E. (2009) The expanding world of methylotrophic metabolism. Annu Rev Microbiol 63: 477-499.
-
(2009)
Annu Rev Microbiol
, vol.63
, pp. 477-499
-
-
Chistoserdova, L.1
Kalyuzhnaya, M.G.2
Lidstrom, M.E.3
-
18
-
-
63149192825
-
Chemical and physical controls on the oxygen regime of ice-covered arctic lakes and reservoirs
-
Clilverd, H., White, D., and Lilly, M. (2009) Chemical and physical controls on the oxygen regime of ice-covered arctic lakes and reservoirs. J Am Wat Resour Ass 45: 500-511.
-
(2009)
J Am Wat Resour Ass
, vol.45
, pp. 500-511
-
-
Clilverd, H.1
White, D.2
Lilly, M.3
-
19
-
-
84861924356
-
-
Biological production of methanol from methane [WWW document]. URL
-
Corder, R.E., Johnson, E.R., Vega, J.L., Clausen, E.C., and Gaddy, J.L. (1986) Biological production of methanol from methane [WWW document]. URL
-
(1986)
-
-
Corder, R.E.1
Johnson, E.R.2
Vega, J.L.3
Clausen, E.C.4
Gaddy, J.L.5
-
20
-
-
0032746991
-
Molecular characterization of functional and phylogenetic genes from natural populations of methanotrophs in lake sediments
-
Costello, A.M., and Lidstrom, M.E. (1999) Molecular characterization of functional and phylogenetic genes from natural populations of methanotrophs in lake sediments. Appl Environ Microbiol 65: 506-5074.
-
(1999)
Appl Environ Microbiol
, vol.65
, pp. 506-5074
-
-
Costello, A.M.1
Lidstrom, M.E.2
-
21
-
-
84861949092
-
-
Marine methyl halide-utilising bacteria. PhD Thesis. Warwick, UK: University of Warwick.
-
Cox, M.J. (2005) Marine methyl halide-utilising bacteria. PhD Thesis. Warwick, UK: University of Warwick.
-
(2005)
-
-
Cox, M.J.1
-
22
-
-
0242668350
-
Bacterioplankton community shifts in an arctic lake correlate with seasonal changes in organic matter source
-
Crump, B.C., Kling, G.W., Bahr, M., and Hobbie, J.E. (2003) Bacterioplankton community shifts in an arctic lake correlate with seasonal changes in organic matter source. Appl Environ Microbiol 69: 2253-2268.
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 2253-2268
-
-
Crump, B.C.1
Kling, G.W.2
Bahr, M.3
Hobbie, J.E.4
-
23
-
-
0034075034
-
Methylocella palustris gen. nov., sp. nov., a new methane-oxidizing acidophilic bacterium from peat bogs, representing a novel subtype of serine-pathway methanotrophs
-
Dedysh, S.N., Liesack, W., Khmelenina, V.N., Suzina, N.E., Trotsenko, Y.A., Semrau, J.D., etal. (2000) Methylocella palustris gen. nov., sp. nov., a new methane-oxidizing acidophilic bacterium from peat bogs, representing a novel subtype of serine-pathway methanotrophs. Int J Syst Evol Microbiol 50: 955-969.
-
(2000)
Int J Syst Evol Microbiol
, vol.50
, pp. 955-969
-
-
Dedysh, S.N.1
Liesack, W.2
Khmelenina, V.N.3
Suzina, N.E.4
Trotsenko, Y.A.5
Semrau, J.D.6
-
24
-
-
0036151243
-
Methylocapsa acidiphila gen. nov., sp. nov., a novel methane-oxidizing and dinitrogen-fixing acidophilic bacterium from Sphagnum bog
-
Dedysh, S.N., Khmelenina, V.N., Suzina, N.E., Trotsenko, Y.A., Semrau, J.D., Liesack, W., and Tiedje, J.M. (2002) Methylocapsa acidiphila gen. nov., sp. nov., a novel methane-oxidizing and dinitrogen-fixing acidophilic bacterium from Sphagnum bog. Int J Syst Evol Microbiol 52: 251-261.
-
(2002)
Int J Syst Evol Microbiol
, vol.52
, pp. 251-261
-
-
Dedysh, S.N.1
Khmelenina, V.N.2
Suzina, N.E.3
Trotsenko, Y.A.4
Semrau, J.D.5
Liesack, W.6
Tiedje, J.M.7
-
25
-
-
2942530573
-
NifH and NifD phylogenies: an evolutionary basis for understanding nitrogen fixation capabilities of methanotrophic bacteria
-
Dedysh, S.N., Ricke, P., and Liesack, W. (2004) NifH and NifD phylogenies: an evolutionary basis for understanding nitrogen fixation capabilities of methanotrophic bacteria. Microbiology 150: 1301-1131.
-
(2004)
Microbiology
, vol.150
, pp. 1301-1131
-
-
Dedysh, S.N.1
Ricke, P.2
Liesack, W.3
-
26
-
-
21144452445
-
Methylocella species are facultatively methanotrophic
-
Dedysh, S.N., Knief, C., and Dunfield, R.F. (2005) Methylocella species are facultatively methanotrophic. J Bacteriol 187: 4665-4670.
-
(2005)
J Bacteriol
, vol.187
, pp. 4665-4670
-
-
Dedysh, S.N.1
Knief, C.2
Dunfield, R.F.3
-
27
-
-
77956270982
-
Implications of temperature and sediment characteristics on methane formation and oxidation in lake sediments
-
Duc, N.T., Crill, P., and Bastviken, D. (2010) Implications of temperature and sediment characteristics on methane formation and oxidation in lake sediments. Biogeochemistry 100: 185-196.
-
(2010)
Biogeochemistry
, vol.100
, pp. 185-196
-
-
Duc, N.T.1
Crill, P.2
Bastviken, D.3
-
28
-
-
19144372182
-
Stable isotope probing-linking microbial identity to function
-
Dumont, M.G., and Murrell, J.C. (2005) Stable isotope probing-linking microbial identity to function. Nat Rev Microbiol 3: 499-504.
-
(2005)
Nat Rev Microbiol
, vol.3
, pp. 499-504
-
-
Dumont, M.G.1
Murrell, J.C.2
-
29
-
-
79955015975
-
DNA-, rRNA- and mRNA-based stable isotope probing of aerobic methanotrophs in lake sediment
-
Dumont, M.G., Pommerenke, B., Casper, P., and Conrad, R. (2011) DNA-, rRNA- and mRNA-based stable isotope probing of aerobic methanotrophs in lake sediment. Environ Microbiol 13: 1153-1167.
-
(2011)
Environ Microbiol
, vol.13
, pp. 1153-1167
-
-
Dumont, M.G.1
Pommerenke, B.2
Casper, P.3
Conrad, R.4
-
30
-
-
36849030274
-
Methane oxidation by an extremely acidophilic bacterium of the phylum Verrucomicrobia
-
Dunfield, P.F., Yuryev, A., Senin, P., Smirnova, A.V., Stott, M.B., Hou, S.B., etal. (2007) Methane oxidation by an extremely acidophilic bacterium of the phylum Verrucomicrobia. Nature 450: 879-882.
-
(2007)
Nature
, vol.450
, pp. 879-882
-
-
Dunfield, P.F.1
Yuryev, A.2
Senin, P.3
Smirnova, A.V.4
Stott, M.B.5
Hou, S.B.6
-
31
-
-
0024420732
-
On the mechanism of inhibition of methanol dehydrogenase by cyclopropane-derived inhibitors
-
Frank, J.J., van Krimpen, S.H., Verwiel, P.E., Jongejan, J.A., Mulder, A.C., and Duine, J.A. (1989) On the mechanism of inhibition of methanol dehydrogenase by cyclopropane-derived inhibitors. Eur J Biochem 184: 187-195.
-
(1989)
Eur J Biochem
, vol.184
, pp. 187-195
-
-
Frank, J.J.1
van Krimpen, S.H.2
Verwiel, P.E.3
Jongejan, J.A.4
Mulder, A.C.5
Duine, J.A.6
-
32
-
-
0025197598
-
Oxidation of methane in the oxic surface layer of a deep lake sediment (Lake Constance)
-
Frenzel, P., Thebrath, B., and Conrad, R. (1990) Oxidation of methane in the oxic surface layer of a deep lake sediment (Lake Constance). FEMS Microbiol Lett 73: 149-158.
-
(1990)
FEMS Microbiol Lett
, vol.73
, pp. 149-158
-
-
Frenzel, P.1
Thebrath, B.2
Conrad, R.3
-
33
-
-
31944434504
-
Stable-isotope probing of DNA: insights into the function of uncultivated microorganisms from isotopically labeled metagenomes
-
Friedrich, M.W. (2006) Stable-isotope probing of DNA: insights into the function of uncultivated microorganisms from isotopically labeled metagenomes. Curr Opin Biotechnol 17: 59-66.
-
(2006)
Curr Opin Biotechnol
, vol.17
, pp. 59-66
-
-
Friedrich, M.W.1
-
34
-
-
0344223436
-
Semicontinuous methanol biosynthesis by Methylosinus trichosporium OB3b
-
Furuto, T., Takeguchi, M., and Okura, I. (1999) Semicontinuous methanol biosynthesis by Methylosinus trichosporium OB3b. J Mol Catal A Chem 144: 257-261.
-
(1999)
J Mol Catal A Chem
, vol.144
, pp. 257-261
-
-
Furuto, T.1
Takeguchi, M.2
Okura, I.3
-
35
-
-
0030003012
-
Methanotrophic bacteria
-
Hanson, R.S., and Hanson, T.E. (1996) Methanotrophic bacteria. Microbiol Rev 60: 439-471.
-
(1996)
Microbiol Rev
, vol.60
, pp. 439-471
-
-
Hanson, R.S.1
Hanson, T.E.2
-
36
-
-
0034353644
-
4 on presence and activity of the indigenous methanotrophic community in rice field soil
-
4 on presence and activity of the indigenous methanotrophic community in rice field soil. Environ Microbiol 2: 666-679.
-
(2000)
Environ Microbiol
, vol.2
, pp. 666-679
-
-
Henckel, T.1
Roslev, P.2
Conrad, R.3
-
37
-
-
0028791540
-
Evidence that particulate methane monooxygenase and ammonia monooxygenase may be evolutionarily related
-
Holmes, A.J., Costello, A., Lidstrom, M.E., and Murrell, J.C. (1995) Evidence that particulate methane monooxygenase and ammonia monooxygenase may be evolutionarily related. EMS Microbiol Lett 132: 203-208.
-
(1995)
EMS Microbiol Lett
, vol.132
, pp. 203-208
-
-
Holmes, A.J.1
Costello, A.2
Lidstrom, M.E.3
Murrell, J.C.4
-
38
-
-
0032849859
-
CAP3: a DNA sequence assembly program
-
Huang, X., and Madan, A. (1999) CAP3: a DNA sequence assembly program. Genome Res 9: 868-877.
-
(1999)
Genome Res
, vol.9
, pp. 868-877
-
-
Huang, X.1
Madan, A.2
-
39
-
-
1142269619
-
Analysis of methanotrophic bacteria in Movile Cave by stable-isotope probing
-
Hutchens, E., Radajewski, S., Dumont, M.G., McDonald, I.R., and Murrell, J.C. (2004) Analysis of methanotrophic bacteria in Movile Cave by stable-isotope probing. Environ Microbiol 6: 111-120.
-
(2004)
Environ Microbiol
, vol.6
, pp. 111-120
-
-
Hutchens, E.1
Radajewski, S.2
Dumont, M.G.3
McDonald, I.R.4
Murrell, J.C.5
-
40
-
-
78651501545
-
Soluble and particulate methane monooxygenase gene clusters of the type I methanotroph Methylovulum miyakonense HT12
-
Iguchi, H., Yurimoto, H., and Sakai, Y. (2010) Soluble and particulate methane monooxygenase gene clusters of the type I methanotroph Methylovulum miyakonense HT12. FEMS Microbiol Lett 312: 71-76.
-
(2010)
FEMS Microbiol Lett
, vol.312
, pp. 71-76
-
-
Iguchi, H.1
Yurimoto, H.2
Sakai, Y.3
-
41
-
-
79955375288
-
Methylovulum miyakonense gen. nov., sp. nov., a no vel type I methanotroph from a forest soil in Japan
-
Iguchi, H., Yurimoto, H., and Sakai, Y. (2011) Methylovulum miyakonense gen. nov., sp. nov., a no vel type I methanotroph from a forest soil in Japan. Int J Syst Evol Microbiol 61: 810-815.
-
(2011)
Int J Syst Evol Microbiol
, vol.61
, pp. 810-815
-
-
Iguchi, H.1
Yurimoto, H.2
Sakai, Y.3
-
42
-
-
38349102157
-
Methane oxidation at 55°C and pH 2 by a thermoacidophilic bacterium belonging to the Verrucomicrobia phylum
-
Islam, T., Jensen, S., Reigstad, L.J., Larsen, O., and Birkeland, N.K. (2008) Methane oxidation at 55°C and pH 2 by a thermoacidophilic bacterium belonging to the Verrucomicrobia phylum. Proc Natl Acad Sci USA 105: 300-304.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 300-304
-
-
Islam, T.1
Jensen, S.2
Reigstad, L.J.3
Larsen, O.4
Birkeland, N.K.5
-
43
-
-
78751704176
-
A persistent oxygen anomaly reveals the fate of spilled methane in the deep Gulf of Mexico
-
Kessler, J.D., Valentine, D.L., Redmond, M.C., Du, M., Chan, E.W., Mendes, S.D., etal. (2011) A persistent oxygen anomaly reveals the fate of spilled methane in the deep Gulf of Mexico. Science 331: 312-315.
-
(2011)
Science
, vol.331
, pp. 312-315
-
-
Kessler, J.D.1
Valentine, D.L.2
Redmond, M.C.3
Du, M.4
Chan, E.W.5
Mendes, S.D.6
-
44
-
-
0028973568
-
Capacity for methane oxidation in landfill cover soils measured in laboratory scale soil microcosms
-
Kightley, D., Nedwell, D.B., and Cooper, M. (1995) Capacity for methane oxidation in landfill cover soils measured in laboratory scale soil microcosms. Appl Environ Microbiol 61: 592-601.
-
(1995)
Appl Environ Microbiol
, vol.61
, pp. 592-601
-
-
Kightley, D.1
Nedwell, D.B.2
Cooper, M.3
-
45
-
-
0024258936
-
Methane cycling in the sediments of Lake Washington
-
Kuivila, K.M., Murray, J.W., Devol, A.H., Lidstrom, M.E., and Reimers, C.E. (1988) Methane cycling in the sediments of Lake Washington. Limnol Oceanogr 33: 571-581.
-
(1988)
Limnol Oceanogr
, vol.33
, pp. 571-581
-
-
Kuivila, K.M.1
Murray, J.W.2
Devol, A.H.3
Lidstrom, M.E.4
Reimers, C.E.5
-
46
-
-
0001857117
-
16S/23S rRNA sequencing
-
(eds). New York, USA: John Wiley & Sons
-
Lane, D.J. (1991) 16S/23S rRNA sequencing. In Nucleic Acid Techniques in Bacterial Systematics. Stackebrandt, E., and Goodfellow, M. (eds). New York, USA: John Wiley & Sons, pp. 115-147.
-
(1991)
Nucleic Acid Techniques in Bacterial Systematics
, pp. 115-147
-
-
Lane, D.J.1
Stackebrandt, E.2
Goodfellow, M.3
-
47
-
-
3342947835
-
Optimization of methanol biosynthesis from methane using Methylosinus trichosporium OB3b
-
Lee, S.G., Goo, J.H., Kim, H.G., Oh, J.I., Kim, Y.M., and Kim, S.W. (2004) Optimization of methanol biosynthesis from methane using Methylosinus trichosporium OB3b. Biotechnol Lett 26: 947-950.
-
(2004)
Biotechnol Lett
, vol.26
, pp. 947-950
-
-
Lee, S.G.1
Goo, J.H.2
Kim, H.G.3
Oh, J.I.4
Kim, Y.M.5
Kim, S.W.6
-
48
-
-
34249939326
-
Biphenyl-utilizing bacteria and their functional genes in a pine root zone contaminated with polychlorinated biphenyls (PCBs)
-
Leigh, M.B., Pellizari, V.H., Uhlík, O., Sutka, R., Rodrigues, J., Ostrom, N.E., etal. (2007) Biphenyl-utilizing bacteria and their functional genes in a pine root zone contaminated with polychlorinated biphenyls (PCBs). ISME J 1: 134-148.
-
(2007)
ISME J
, vol.1
, pp. 134-148
-
-
Leigh, M.B.1
Pellizari, V.H.2
Uhlík, O.3
Sutka, R.4
Rodrigues, J.5
Ostrom, N.E.6
-
49
-
-
33846039878
-
Abundance, distribution and potential activity of methane oxidizing bacteria in permafrost soils from the Lena Delta, Siberia
-
Liebner, S., and Wagner, D. (2007) Abundance, distribution and potential activity of methane oxidizing bacteria in permafrost soils from the Lena Delta, Siberia. Environ Microbiol 9: 107-117.
-
(2007)
Environ Microbiol
, vol.9
, pp. 107-117
-
-
Liebner, S.1
Wagner, D.2
-
50
-
-
54549106898
-
Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers
-
Liu, Z., DeSantis, T.Z., Andersen, G.L., and Knight, R. (2008) Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers. Nucleic Acids Res 36: e120.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Liu, Z.1
DeSantis, T.Z.2
Andersen, G.L.3
Knight, R.4
-
51
-
-
0030872092
-
The methanol dehydrogenase structural gene mxaF and its use as a functional gene probe for methanotrophs and methylotrophs
-
McDonald, I.R., and Murrell, J.C. (1997) The methanol dehydrogenase structural gene mxaF and its use as a functional gene probe for methanotrophs and methylotrophs. Appl Environ Microbiol 63: 3218-3224.
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 3218-3224
-
-
McDonald, I.R.1
Murrell, J.C.2
-
52
-
-
0028873592
-
Detection of methanotrophic bacteria in environmental samples with the PCR
-
McDonald, I.R., Kenna, E.M., and Murrell, J.C. (1995) Detection of methanotrophic bacteria in environmental samples with the PCR. Appl Environ Microbiol 61: 161-121.
-
(1995)
Appl Environ Microbiol
, vol.61
, pp. 161-121
-
-
McDonald, I.R.1
Kenna, E.M.2
Murrell, J.C.3
-
53
-
-
17644407376
-
Stable isotope probing of nucleic acids in methanotrophs and methylotrophs: a review
-
McDonald, I.R., Radajewski, S., and Murrell, J.C. (2005) Stable isotope probing of nucleic acids in methanotrophs and methylotrophs: a review. Org Geochem 36: 779-787.
-
(2005)
Org Geochem
, vol.36
, pp. 779-787
-
-
McDonald, I.R.1
Radajewski, S.2
Murrell, J.C.3
-
54
-
-
40549104438
-
Molecular ecology techniques for the study of aerobic methanotrophs
-
McDonald, I.R., Bodrossy, L., Chen, Y., and Murrell, J.C. (2008) Molecular ecology techniques for the study of aerobic methanotrophs. Appl Environ Microbiol 74: 1305-1315.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 1305-1315
-
-
McDonald, I.R.1
Bodrossy, L.2
Chen, Y.3
Murrell, J.C.4
-
55
-
-
77956094949
-
Stable isotope probing analysis of the diversity and activity of methanotrophic bacteria in soils from the Canadian High Arctic
-
Martineau, C., Whyte, L.G., and Greer, C.W. (2010) Stable isotope probing analysis of the diversity and activity of methanotrophic bacteria in soils from the Canadian High Arctic. Appl Environ Microbiol 76: 5773-5784.
-
(2010)
Appl Environ Microbiol
, vol.76
, pp. 5773-5784
-
-
Martineau, C.1
Whyte, L.G.2
Greer, C.W.3
-
56
-
-
0035043535
-
Production, oxidation, emission and consumption of methane by soils: a review
-
Mer, J.L., and Roger, P. (2001) Production, oxidation, emission and consumption of methane by soils: a review. Eur J Soil Biol 37: 25-50.
-
(2001)
Eur J Soil Biol
, vol.37
, pp. 25-50
-
-
Mer, J.L.1
Roger, P.2
-
57
-
-
0030900966
-
Detection and isolation of methanotrophic bacteria possessing soluble methane monooxygenase (sMMO) genes using the polymerase chain reaction (PCR)
-
Miguez, C.B., Bourque, D., Sealy, J.A., Greer, C.W., and Groleau, D. (1997) Detection and isolation of methanotrophic bacteria possessing soluble methane monooxygenase (sMMO) genes using the polymerase chain reaction (PCR). Microb Ecol 33: 21-31.
-
(1997)
Microb Ecol
, vol.33
, pp. 21-31
-
-
Miguez, C.B.1
Bourque, D.2
Sealy, J.A.3
Greer, C.W.4
Groleau, D.5
-
58
-
-
0342546645
-
Physics
-
Hobbie, J.E. (ed.). Stroudsburg, PA, USA: Dowden, Hutchinson and Ross
-
Miller, M.C., Prentki, R.T., and Barsdate, R.J. (1980) Physics. In Limnology of Tundra Ponds: Barrow, Alaska. Hobbie, J.E. (ed.). Stroudsburg, PA, USA: Dowden, Hutchinson and Ross, pp. 51-75.
-
(1980)
Limnology of Tundra Ponds: Barrow, Alaska
, pp. 51-75
-
-
Miller, M.C.1
Prentki, R.T.2
Barsdate, R.J.3
-
59
-
-
34948835698
-
Stable-isotope probing implicates Methylophaga spp. and novel Gammaproteobacteria in marine methanol and methylamine metabolism
-
Neufeld, J.D., Schäfer, H., Cox, M.J., Boden, R., McDonald, I.R., and Murrell, J.C. (2007a) Stable-isotope probing implicates Methylophaga spp. and novel Gammaproteobacteria in marine methanol and methylamine metabolism. ISME J 1: 480-491.
-
(2007)
ISME J
, vol.1
, pp. 480-491
-
-
Neufeld, J.D.1
Schäfer, H.2
Cox, M.J.3
Boden, R.4
McDonald, I.R.5
Murrell, J.C.6
-
60
-
-
34248137874
-
Methodological considerations for the use of stable isotope probing in microbial ecology
-
Neufeld, J.D., Dumont, M.G., Vohra, J., and Murrell, J.C. (2007b) Methodological considerations for the use of stable isotope probing in microbial ecology. Microb Ecol 53: 435-442.
-
(2007)
Microb Ecol
, vol.53
, pp. 435-442
-
-
Neufeld, J.D.1
Dumont, M.G.2
Vohra, J.3
Murrell, J.C.4
-
61
-
-
36949016622
-
Methanotrophy below pH1 by a new Verrucomicrobia species
-
Pol, A., Heijmans, K., Harhangi, H.R., Tedesco, D., Jetten, M.S.M., and den Camp, H.J.M. (2007) Methanotrophy below pH1 by a new Verrucomicrobia species. Nature 450: 874-878.
-
(2007)
Nature
, vol.450
, pp. 874-878
-
-
Pol, A.1
Heijmans, K.2
Harhangi, H.R.3
Tedesco, D.4
Jetten, M.S.M.5
den Camp, H.J.M.6
-
62
-
-
0031773680
-
Modeltest: testing the model of DNA substitution
-
Posada, D., and Crandall, K.A. (1998) Modeltest: testing the model of DNA substitution. Bioinformatics 14: 817-818.
-
(1998)
Bioinformatics
, vol.14
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
63
-
-
44849128159
-
Applying stable isotope probing of phospholipid fatty acids and rRNA in a Chinese rice field to study activity and composition of the methanotrophic bacterial communities in situ
-
Qiu, Q., Noll, M., Abraham, W.R., Lu, Y., and Conrad, R. (2008) Applying stable isotope probing of phospholipid fatty acids and rRNA in a Chinese rice field to study activity and composition of the methanotrophic bacterial communities in situ. ISME J 2: 602-614.
-
(2008)
ISME J
, vol.2
, pp. 602-614
-
-
Qiu, Q.1
Noll, M.2
Abraham, W.R.3
Lu, Y.4
Conrad, R.5
-
64
-
-
0034628432
-
Stable-isotope probing as a tool in microbial ecology
-
Radajewski, S., Ineson, P., Parekh, N.R., and Murrell, J.C. (2000) Stable-isotope probing as a tool in microbial ecology. Nature 403: 646-649.
-
(2000)
Nature
, vol.403
, pp. 646-649
-
-
Radajewski, S.1
Ineson, P.2
Parekh, N.R.3
Murrell, J.C.4
-
65
-
-
0036667422
-
Identification of active methylotroph populations in an acidic forest soil by stable-isotope probing
-
Radajewski, S., Webster, G., Reay, D.S., Morris, S.A., Ineson, P., Nedwell, D.B., etal. (2002) Identification of active methylotroph populations in an acidic forest soil by stable-isotope probing. Microbiology 148: 2331-2342.
-
(2002)
Microbiology
, vol.148
, pp. 2331-2342
-
-
Radajewski, S.1
Webster, G.2
Reay, D.S.3
Morris, S.A.4
Ineson, P.5
Nedwell, D.B.6
-
66
-
-
0038482074
-
Stable-isotope probing of nucleic acids: a window to the function of uncultured microorganisms
-
Radajewski, S., McDonald, I.R., and Murrell, J.C. (2003) Stable-isotope probing of nucleic acids: a window to the function of uncultured microorganisms. Curr Opin Biotechnol 14: 296-302.
-
(2003)
Curr Opin Biotechnol
, vol.14
, pp. 296-302
-
-
Radajewski, S.1
McDonald, I.R.2
Murrell, J.C.3
-
67
-
-
58149340247
-
Abundance and activity of methanotrophic bacteria in littoral and profundal sediments of lake constance (Germany)
-
Rahalkar, M., Deutzmann, J., Schink, B., and Bussmann, I. (2009) Abundance and activity of methanotrophic bacteria in littoral and profundal sediments of lake constance (Germany). Appl Environ Microbiol 75: 119-126.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 119-126
-
-
Rahalkar, M.1
Deutzmann, J.2
Schink, B.3
Bussmann, I.4
-
68
-
-
77953215053
-
Methanotrophs and copper
-
Semrau, J.D., DiSpirito, A.A., and Yoon, S. (2010) Methanotrophs and copper. FEMS Microbiol Rev 34: 496-531.
-
(2010)
FEMS Microbiol Rev
, vol.34
, pp. 496-531
-
-
Semrau, J.D.1
DiSpirito, A.A.2
Yoon, S.3
-
69
-
-
38049134853
-
Activity and composition of methanotrophic bacterial communities in planted rice soil studied by flux measurements, analyses of pmoA gene and stable isotope probing of phospholipid fatty acids
-
Shrestha, M., Abraham, W.R., Shrestha, P.M., Noll, M., and Conrad, R. (2008) Activity and composition of methanotrophic bacterial communities in planted rice soil studied by flux measurements, analyses of pmoA gene and stable isotope probing of phospholipid fatty acids. Environ Microbiol 10: 400-412.
-
(2008)
Environ Microbiol
, vol.10
, pp. 400-412
-
-
Shrestha, M.1
Abraham, W.R.2
Shrestha, P.M.3
Noll, M.4
Conrad, R.5
-
70
-
-
73549089476
-
Atmospheric methane isotope records covering the Holocene period
-
Sowers, T. (2010) Atmospheric methane isotope records covering the Holocene period. Quat Sci Rev 29: 213-221.
-
(2010)
Quat Sci Rev
, vol.29
, pp. 213-221
-
-
Sowers, T.1
-
72
-
-
19544380071
-
Aerobic methanotrophic bacteria of cold ecosystems
-
Trotsenko, Y.A., and Khmelenina, V.N. (2005) Aerobic methanotrophic bacteria of cold ecosystems. FEMS Microbiol Ecol 53: 15-26.
-
(2005)
FEMS Microbiol Ecol
, vol.53
, pp. 15-26
-
-
Trotsenko, Y.A.1
Khmelenina, V.N.2
-
73
-
-
77957750550
-
Propane respiration jump-starts microbial response to a deep oil spill
-
Valentine, D.L., Kessler, J.D., Redmond, M.C., Mendes, S.D., Heintz, M.B., Farwell, C., etal. (2010) Propane respiration jump-starts microbial response to a deep oil spill. Science 330: 208-211.
-
(2010)
Science
, vol.330
, pp. 208-211
-
-
Valentine, D.L.1
Kessler, J.D.2
Redmond, M.C.3
Mendes, S.D.4
Heintz, M.B.5
Farwell, C.6
-
74
-
-
0027296214
-
Activity and species composition of aerobic methanotrophic communities in tundra soils
-
Vecherskaya, M.S., Galchenko, V.F., Sokolova, E.N., and Samarkin, V.A. (1993) Activity and species composition of aerobic methanotrophic communities in tundra soils. Curr Microbiol 27: 181-184.
-
(1993)
Curr Microbiol
, vol.27
, pp. 181-184
-
-
Vecherskaya, M.S.1
Galchenko, V.F.2
Sokolova, E.N.3
Samarkin, V.A.4
-
75
-
-
0025157111
-
Physiology and genetics of methylotrophic bacteria
-
Vries, G.E., Kües, U., and Stahl, U. (1990) Physiology and genetics of methylotrophic bacteria. FEMS Microbiol Lett 75: 57-101.
-
(1990)
FEMS Microbiol Lett
, vol.75
, pp. 57-101
-
-
Vries, G.E.1
Kües, U.2
Stahl, U.3
-
76
-
-
33748421762
-
Methane bubbling from Siberianthaw lakes as a positive feedback to climate warming
-
Walter, K.M., Zimov, S.A., Chanton, J.P., Verbyla, D., and Chapin, F.S., III (2006) Methane bubbling from Siberianthaw lakes as a positive feedback to climate warming. Nature 44: 71-75.
-
(2006)
Nature
, vol.44
, pp. 71-75
-
-
Walter, K.M.1
Zimov, S.A.2
Chanton, J.P.3
Verbyla, D.4
Chapin III, F.S.5
-
77
-
-
34547267913
-
Methane bubbling from northern lakes: present and future contributions to the global methane budget
-
Walter, K.M., Smith, L.C., and Chapin, F.S., III (2007) Methane bubbling from northern lakes: present and future contributions to the global methane budget. Philos Trans R Soc Lond A 365: 1657-1676.
-
(2007)
Philos Trans R Soc Lond A
, vol.365
, pp. 1657-1676
-
-
Walter, K.M.1
Smith, L.C.2
Chapin III, F.S.3
-
78
-
-
33645077863
-
Biogeochemistry of methane in the permanently ice-covered Lake Untersee, central Dronning Maud Land, East Antarctica
-
Wand, U., Samarkin, V.A., Nitzsche, H.M., and Hubberten, H.W. (2006) Biogeochemistry of methane in the permanently ice-covered Lake Untersee, central Dronning Maud Land, East Antarctica. Limnol Oceanogr 51: 1180-1194.
-
(2006)
Limnol Oceanogr
, vol.51
, pp. 1180-1194
-
-
Wand, U.1
Samarkin, V.A.2
Nitzsche, H.M.3
Hubberten, H.W.4
-
79
-
-
43849105101
-
Group-specific quantification of methanotrophs in landfill gas-purged laboratory biofilters by tyramide signal amplification-fluorescence in situ hybridization
-
Wang, H., Einola, J., Heinone, M., Kulomaa, M., and Rintala, J. (2008) Group-specific quantification of methanotrophs in landfill gas-purged laboratory biofilters by tyramide signal amplification-fluorescence in situ hybridization. Bioresour Technol 99: 6426-6433.
-
(2008)
Bioresour Technol
, vol.99
, pp. 6426-6433
-
-
Wang, H.1
Einola, J.2
Heinone, M.3
Kulomaa, M.4
Rintala, J.5
|