Changes in mitochondrial proteome of renal tubular cells induced by calcium oxalate monohydrate crystal adhesion and internalization are related to mitochondrial dysfunction

Journal of Proteome Research

Volumn 11, Issue 6, 2012, Pages 3269-3280

  Chaiyarit, Sakdithep ^a,b   Thongboonkerd, Visith ^a,b  

^a MAHIDOL UNIVERSITY   (Thailand)

^b MAHIDOL UNIVERSITY   (Thailand)

Author keywords

calcium oxalate; crystal adhesion; internalization; mitochondria; oxidation; proteomics

Indexed keywords

BETA ACTIN; CARBOHYDRATE; EZRIN; WHEWELLITE; CALCIUM OXALATE; MITOCHONDRIAL PROTEIN; PROTEOME;

ANIMAL CELL; ARTICLE; ASSAY; CARBOHYDRATE METABOLISM; CELL LINE; CONFOCAL MICROSCOPY; CRYSTAL; CULTURE MEDIUM; DISORDERS OF MITOCHONDRIAL FUNCTIONS; DOSE RESPONSE; ENERGY; ENERGY METABOLISM; FLOW CYTOMETRY; KIDNEY TUBULE CELL; LASER SCANNING CYTOMETRY; MASS SPECTROMETRY; NEPHROLITHIASIS; NONHUMAN; OXIDATIVE STRESS; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN EXPRESSION; PROTEOMICS; QUANTITATIVE ANALYSIS; WESTERN BLOTTING; ANIMAL; CELL ADHESION; CRYSTALLIZATION; CYTOLOGY; DOG; DRUG EFFECTS; KIDNEY TUBULE; MDCK CELL LINE; METABOLISM; MITOCHONDRION; OXIDATION REDUCTION REACTION;

ANIMALS; CALCIUM OXALATE; CELL ADHESION; CRYSTALLIZATION; DOGS; KIDNEY TUBULES; MADIN DARBY CANINE KIDNEY CELLS; MITOCHONDRIA; MITOCHONDRIAL PROTEINS; OXIDATION-REDUCTION; OXIDATIVE STRESS; PROTEOME;

EID: 84861829945     PISSN: 15353893     EISSN: 15353907     Source Type: Journal    
DOI: 10.1021/pr300018c     Document Type: Article

References (38)

1. Coe, F. L.; Evan, A.; Worcester, E. Kidney stone disease J. Clin. Invest. 2005, 115, 2598-2608
2. Verkoelen, C. F.; Verhulst, A. Proposed mechanisms in renal tubular crystal retention Kidney Int. 2007, 72, 13-18
3. Khan, S. R.; Cockrell, C. A.; Finlayson, B.; Hackett, R. L. Crystal retention by injured urothelium of the rat urinary bladder J. Urol. 1984, 132, 153-157
4. Habibzadegah-Tari, P.; Byer, K.; Khan, S. R. Oxalate induced expression of monocyte chemoattractant protein-1 (MCP-1) in HK-2 cells involves reactive oxygen species Urol. Res. 2005, 33, 440-447
5. Hansel, D. E.; Dhara, S.; Huang, R. C.; Ashfaq, R.; Deasel, M.; Shimada, Y.; Bernstein, H. S.; Harmon, J.; Brock, M.; Forastiere, A.; Washington, M. K.; Maitra, A.; Montgomery, E. CDC2/CDK1 expression in esophageal adenocarcinoma and precursor lesions serves as a diagnostic and cancer progression marker and potential novel drug target Am. J. Surg. Pathol. 2005, 29, 390-399
6. Khan, S. R. Role of renal epithelial cells in the initiation of calcium oxalate stones Nephron Exp. Nephrol. 2004, 98, e55-e60
7. Brookes, P. S.; Yoon, Y.; Robotham, J. L.; Anders, M. W.; Sheu, S. S. Calcium, ATP, and ROS: a mitochondrial love-hate triangle Am. J. Physiol.: Cell Physiol. 2004, 287, C817-C833
8. Thongboonkerd, V.; Semangoen, T.; Chutipongtanate, S. Factors determining types and morphologies of calcium oxalate crystals: Molar concentrations, buffering, pH, stirring and temperature Clin. Chim. Acta 2006, 367, 120-131
9. Thongboonkerd, V.; Chutipongtanate, S.; Semangoen, T.; Malasit, P. Urinary trefoil factor 1 is a novel potent inhibitor of calcium oxalate crystal growth and aggregation J. Urol. 2008, 179, 1615-1619
10. Chaiyarit, S.; Mungdee, S.; Thongboonkerd, V. Non-radioactive labelling of calcium oxalate crystals for investigations of crystal-cell interaction and internalization Anal. Methods 2010, 2, 1536-1541
11. Verkoelen, C. F.; van der Boom, B. G.; Houtsmuller, A. B.; Schroder, F. H.; Romijn, J. C. Increased calcium oxalate monohydrate crystal binding to injured renal tubular epithelial cells in culture Am. J. Physiol. 1998, 274, F958-F965
12. Chaiyarit, S.; Thongboonkerd, V. Comparative analyses of cell disruption methods for mitochondrial isolation in high-throughput proteomics study Anal. Biochem. 2009, 394, 249-258
13. Rajagopalan, D.; Agarwal, P. Inferring pathways from gene lists using a literature-derived network of biological relationships Bioinformatics 2005, 21, 788-793
14. Semangoen, T.; Sinchaikul, S.; Chen, S. T.; Thongboonkerd, V. Proteomic analysis of altered proteins in distal renal tubular cells in response to calcium oxalate monohydrate crystal adhesion: Implications for kidney stone disease Proteomics Clin. Appl. 2008, 2, 1099-1109
15. McMartin, K. E.; Wallace, K. B. Calcium oxalate monohydrate, a metabolite of ethylene glycol, is toxic for rat renal mitochondrial function Toxicol. Sci. 2005, 84, 195-200
16. Meimaridou, E.; Lobos, E.; Hothersall, J. S. Renal oxidative vulnerability due to changes in mitochondrial-glutathione and energy homeostasis in a rat model of calcium oxalate urolithiasis Am. J. Physiol.: Renal Physiol. 2006, 291, F731-F740
17. Arjunan, P.; Nemeria, N.; Brunskill, A.; Chandrasekhar, K.; Sax, M.; Yan, Y.; Jordan, F.; Guest, J. R.; Furey, W. Structure of the pyruvate dehydrogenase multienzyme complex E1 component from Escherichia coli at 1.85 Å resolution Biochemistry 2002, 41, 5213-5221
18. Veena, C. K.; Josephine, A.; Preetha, S. P.; Rajesh, N. G.; Varalakshmi, P. Mitochondrial dysfunction in an animal model of hyperoxaluria: a prophylactic approach with fucoidan Eur. J. Pharmacol. 2008, 579, 330-336
19. Coenen, M. J.; van den Heuvel, L. P.; Smeitink, J. A. Mitochondrial oxidative phosphorylation system assembly in man: recent achievements Curr. Opin. Neurol. 2001, 14, 777-781
20. St Pierre, J.; Buckingham, J. A.; Roebuck, S. J.; Brand, M. D. Topology of superoxide production from different sites in the mitochondrial electron transport chain J. Biol. Chem. 2002, 277, 44784-44790
21. O'Brien, K. M.; Dirmeier, R.; Engle, M.; Poyton, R. O. Mitochondrial protein oxidation in yeast mutants lacking manganese-(MnSOD) or copper- and zinc-containing superoxide dismutase (CuZnSOD): evidence that MnSOD and CuZnSOD have both unique and overlapping functions in protecting mitochondrial proteins from oxidative damage J. Biol. Chem. 2004, 279, 51817-51827
22. Leary, S. C.; Sasarman, F. Oxidative phosphorylation: synthesis of mitochondrially encoded proteins and assembly of individual structural subunits into functional holoenzyme complexes Methods Mol. Biol. 2009, 554, 143-162
23. Voloboueva, L. A.; Duan, M.; Ouyang, Y.; Emery, J. F.; Stoy, C.; Giffard, R. G. Overexpression of mitochondrial Hsp70/Hsp75 protects astrocytes against ischemic injury in vitro J. Cereb. Blood Flow Metab. 2008, 28, 1009-1016
24. Liu, Y.; Liu, W.; Song, X. D.; Zuo, J. Effect of GRP75/mthsp70/PBP74/ mortalin overexpression on intracellular ATP level, mitochondrial membrane potential and ROS accumulation following glucose deprivation in PC12 cells Mol. Cell. Biochem. 2005, 268, 45-51
25. Hua, G.; Zhang, Q.; Fan, Z. Heat shock protein 75 (TRAP1) antagonizes reactive oxygen species generation and protects cells from granzyme M-mediated apoptosis J. Biol. Chem. 2007, 282, 20553-20560
26. Roy, S. S.; Ehrlich, A. M.; Craigen, W. J.; Hajnoczky, G. VDAC2 is required for truncated BID-induced mitochondrial apoptosis by recruiting BAK to the mitochondria EMBO Rep. 2009, 10, 1341-1347
27. Rahmani, Z.; Maunoury, C.; Siddiqui, A. Isolation of a novel human voltage-dependent anion channel gene Eur. J. Hum. Genet. 1998, 6, 337-340
28. Wallace, D. C.; Fan, W. Energetics, epigenetics, mitochondrial genetics Mitochondrion 2010, 10, 12-31
29. Algrain, M.; Turunen, O.; Vaheri, A.; Louvard, D.; Arpin, M. Ezrin contains cytoskeleton and membrane binding domains accounting for its proposed role as a membrane-cytoskeletal linker J. Cell Biol. 1993, 120, 129-139
30. Tian, T.; Lindell, S. L.; Henderson, S. C.; Mangino, M. J. Protective effects of ezrin on cold storage preservation injury in the pig kidney proximal tubular epithelial cell line (LLC-PK1) Transplantation 2009, 87, 1488-1496
31. Lakshman, M.; Subramaniam, V.; Jothy, S. CD44 negatively regulates apoptosis in murine colonic epithelium via the mitochondrial pathway Exp. Mol. Pathol. 2004, 76, 196-204
32. Berryman, M.; Gary, R.; Bretscher, A. Ezrin oligomers are major cytoskeletal components of placental microvilli: a proposal for their involvement in cortical morphogenesis J. Cell Biol. 1995, 131, 1231-1242
33. Helander, T. S.; Carpen, O.; Turunen, O.; Kovanen, P. E.; Vaheri, A.; Timonen, T. ICAM-2 redistributed by ezrin as a target for killer cells Nature 1996, 382, 265-268
34. Thongboonkerd, V.; Semangoen, T.; Sinchaikul, S.; Chen, S. T. Proteomic analysis of calcium oxalate monohydrate crystal-induced cytotoxicity in distal renal tubular cells J. Proteome Res. 2008, 7, 4689-4700
35. Vicente-Manzanares, M.; Viton, M.; Sanchez-Madrid, F. Measurement of the levels of polymerized actin (F-actin) in chemokine-stimulated lymphocytes and GFP-coupled cDNA transfected lymphoid cells by flow cytometry Methods Mol. Biol. 2004, 239, 53-68
36. Revenu, C.; Athman, R.; Robine, S.; Louvard, D. The co-workers of actin filaments: from cell structures to signals Nat. Rev. Mol. Cell Biol. 2004, 5, 635-646
37. Tang, H. L.; Le, A. H.; Lung, H. L. The increase in mitochondrial association with actin precedes Bax translocation in apoptosis Biochem. J. 2006, 396, 1-5
38. Boldogh, I. R.; Pon, L. A. Interactions of mitochondria with the actin cytoskeleton Biochim. Biophys. Acta 2006, 1763, 450-462