Bpipe: A tool for running and managing bioinformatics pipelines

Bioinformatics

Volumn 28, Issue 11, 2012, Pages 1525-1526

  Sadedin, Simon P ^a   Pope, Bernard ^b   Oshlack, Alicia ^a  

^a ROYAL CHILDREN'S HOSPITAL   (Australia)

^b UNIVERSITY OF MELBOURNE   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BIOLOGY; COMPUTER LANGUAGE; COMPUTER PROGRAM; INSTRUMENTATION; METHODOLOGY; WORKFLOW;

COMPUTATIONAL BIOLOGY; PROGRAMMING LANGUAGES; SOFTWARE; WORKFLOW;

EID: 84861746974     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/bts167     Document Type: Article

References (4)

1. Goecks, J. et al. (2010) Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences. Genome Biol., 11, R86.
2. Goodstadt, L. (2010) Ruffus: a lightweight Python library for computational pipelines. Bioinformatics, 26, 2778-2779.
3. Li, H. et al. (2009) Fast and accurate short read alignment with Burrows-Wheeler Transform. Bioinformatics, 25, 1754-1760.
4. Oinn, T. et al. (2004) Taverna: a tool for the composition and enactment of bioinformatics workflows. Bioinformatics, 20, 3045-3054.