Identifying a healthy oral microbiome through metagenomics

Clinical Microbiology and Infection

Volumn 18, Issue SUPPL. 4, 2012, Pages 54-57

  Alcaraz, L D ^a   Belda Ferre, P ^a   Cabrera Rubio, R ^a   Romero, H ^b   Simon Soro A ^a   Pignatelli, M ^a   Mira, A ^a  

^a Center for Advanced Research in Public Health   (Spain)

^b UNIVERSIDAD DE LA REPÚBLICA   (Uruguay)

Author keywords

Binning; Dental caries; Metagenomics; Probiotic; Pyrosequencing

Indexed keywords

DNA; RNA 16S;

AGGREGATIBACTER; ARTICLE; CARDIOBACTERIUM; CLINICAL ARTICLE; CLUSTER ANALYSIS; CONTROLLED STUDY; DENTAL CARIES; DNA SEQUENCE; HUMAN; KINGELLA; MANNHEIMIA; METAGENOMICS; MICROBIOME; MOUTH FLORA; NEISSERIA; NONHUMAN; PRIORITY JOURNAL; PYROSEQUENCING; ROTHIA;

BACTERIA (MICROORGANISMS);

EID: 84861694251     PISSN: 1198743X     EISSN: 14690691     Source Type: Journal    
DOI: 10.1111/j.1469-0691.2012.03857.x     Document Type: Article

References (13)

1. Socransky SS, Haffajee AD, Cugini MA, Smith C, Kent RL. Microbial complexes in subgingival plaque. J Clin Periodontol 1998; 25: 134-144.
2. Loesche WJ. Role of Streptococcus mutans in human dental decay. Microbiol Rev 1986; 50: 353-380.
3. Corby PM, Lyons-Weiler J, Bretz WA et al. Microbial risk indicators of early childhood caries. J Clin Microbiol 2005; 43: 5753-5759.
4. Aas JA, Griffen AL, Dardis SR et al. Bacteria of dental caries in primary and permanent teeth in children and young adults. J Clin Microbiol 2008; 46: 1407-1417.
5. Kleinberg I. A mixed-bacteria ecological approach to understanding the role of the oral bacteria in dental caries causation: an alternative to Streptococcus mutans and the specific-plaque hypothesis. Crit Rev Oral Biol Med 2002; 13: 108-125.
6. Mullany P, Hunter S, Allan E. Metagenomics of dental biofilms. Adv Appl Microbiol 2008; 64: 125-136.
7. Qin J, Li R, Raes J et al. A human gut microbial gene catalogue established by metagenomic sequencing. Nature 2010; 464: 59-65.
8. Brady A, Salzberg SL. Phymm, Phymm BL. metagenomic phylogenetic classification with interpolated Markov models. Nat Methods 2009; 6: 673-676.
9. Paster BJ, Boches SK, Galvin JL et al. Bacterial diversity in human subgingival plaque. J Bacteriol 2001; 183: 3770-3783.
10. Zaura E, Keijser BJF, Huse SM, Crielaard W. Defining the healthy 'core microbiome' of oral microbial communities. BMC Microbiol 2009; 9: 259.
11. Belda-Ferre P, Alcaraz LD, Cabrera-Rubio R et al. The oral metagenome in health and disease. ISME J 2012; 6: 46-56.
12. Abiko Y. Passive immunization against dental caries and periodontal disease: development of recombinant and human monoclonal antibodies. Crit Rev Oral Biol Med 2000; 11: 140-158.
13. Mira A. Horizontal gene transfer in oral bacteria. In: Rogers AH, ed. Oral molecular microbiology. Caister Academic Press: Norfolk, UK, 2007; 65-85.