Suppression of Rhizoctonia and Pythium root rot of wheat by new strains of Pseudomonas

Biological Control

Volumn 62, Issue 2, 2012, Pages 93-102

  Mavrodi, Olga V ^a   Walter, Nathalie ^b   Elateek, Sawsan ^c   Taylor, Christopher G ^c   Okubara, Patricia A ^b  

^a WASHINGTON STATE UNIVERSITY   (United States)

^b U S DEPARTMENT OF AGRICULTURE   (United States)

^c OHIO STATE UNIVERSITY   (United States)

Author keywords

Biological control; PGPR; Pseudomonas spp.; Pythium ultimum; Rhizoctonia solani; Rhizosphere colonization

Indexed keywords

FUNGI; HYPHOMYCETES; PSEUDOMONAS; PSEUDOMONAS BOREALIS; PSEUDOMONAS CHLORORAPHIS; PSEUDOMONAS FLUORESCENS; PSEUDOMONAS MANDELII; PSEUDOMONAS MARGINALIS; PSEUDOMONAS POAE; PSEUDOMONAS PUTIDA; PSEUDOMONAS SYRINGAE; PSEUDOMONAS VRANOVENSIS; PYTHIUM; PYTHIUM IRREGULARE; PYTHIUM ULTIMUM; RHIZOCTONIA; THANATEPHORUS CUCUMERIS; TRITICUM AESTIVUM; WAITEA CIRCINATA;

EID: 84861481566     PISSN: 10499644     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.biocontrol.2012.03.013     Document Type: Article

References (57)

1. Altschul S.F., Madden T.L., Schaffer A.A., Zhang J., Zhang Z., Mille R.W., Lipman D.J. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Research 1997, 25:3389-3402.
2. Aly, H., Kamalay, J., Taylor, C.G., 2007. Characterization of the Pseudomonas genus of bacteria for plant-parasitic nematode control. ASM Conferences " Pseudomonas 2007" , Seattle, WA, USA. Abstract 166B, p. 93.
3. Ausubel F.M., Brent R., Kingston R.E., Moore D.D., Seidman J.G., Smith J.A., Struhl K. Short Protocols in Molecular Biology 1995, John Wiley and Sons, New York. third ed.
4. Bender C.L., Alarcon-Chaidez F., Gross D.C. Pseudomonas syringae phytotoxins: mode of action, regulation, and biosynthesis by peptide and polyketide synthetases. Microbiology and Molecular Biology Reviews 1999, 63:266-292.
5. Bockus W.W., Shroyer J.P. The impact of reduced tillage on soil-borne plant pathogens. Annual Review of Phytopathology 1998, 36:485-500.
6. Bull C.T., Weller D.M., Thomashow L.S. Relationship between root colonization and suppression of Gaeumannomyces graminis var. tritici by Pseudomonas fluorescens strain 2-79. Phytopathology 1991, 81:954-959.
7. Cook R.J., Schillinger W.F., Christensen N.W. Rhizoctonia root rot and take-all of wheat in diverse direct-seed spring cropping systems. Canadian Journal of Plant Pathology 2002, 24:349-358.
8. Cook R.J., Sitton J.W., Haglund W.A. Influence of soil treatments on growth and yield of wheat and implications for control of Pythium root rot. Phytopathology 1987, 77:1192-1198.
9. Couillerot O., Prigent-Combaret C., Caballero-Mellado J., Moënne-Loccoz Y. Pseudomonas fluorescens and closely related fluorescent pseudomonads as biocontrol agents of soil-borne phytopathogens. Letters in Applied Microbiology 2009, 48:505-512.
10. Dandie C.E., Burton D.L., Zebarth B.J., Henderson S.L., Trevors J.T., Goyer C. Changes in bacterial denitrifier community abundance over time in an agricultural field and their relationship with denitrification activity. Applied and Environmental Microbiology 2008, 74:5997-6005.
11. de Bruijn I., Raaijmakers J.M. Regulation of cyclic lipopeptide biosynthesis in Pseudomonas fluorescens by the clpP protease. Journal of Bacteriology 2009, 191:1910-1923.
12. De La Fuente L., Mavrodi D.V., Thomashow L.C., Weller D.M. Utilization of trehalose, benzoate, velerate, and seed and toot exudates by genotypes of 2,4-diacetylphloroglucinol producing Pseudomonas fluorescens. Soil Biology and Biochemistry 2007, 39:2712-2722.
13. Di Lorenzo A., Varcamonti M., Parascandola P., Vignola R., Bernardi A., Sacceddu P., Sisto R., de Alteriis E. Characterization and performance of a toluene-degrading biofilm developed on pumice stones. Microbial Cell Factories 2005, 4:4.
14. Fravel D.R. Commercialization and implementation of biocontrol. Annual Review of Phytopathology 2005, 43:337-359.
15. Haas D., Défago G. Biological control of soil-borne pathogens by fluorescent pseudomonads. Nature Reviews Microbiology 2005, 3:307-319.
16. Higginbotham R.W., Paulitz T.C., Campbell K.G., Kidwell K.K. Evaluation of adapted wheat cultivars for tolerance to Pythium root rot. Plant Disease 2004, 88:1027-1032.
17. Howell C.R., Stipanovic R.D. Control of Rhizoctonia solani in cotton seedlings with Pseudomonas fluorescens and with antibiotic produced by the bacterium. Phytopathology 1979, 69:480-482.
18. Howell C.R., Stipanovic R.D. Suppression of Pythium ultimum induced damping-off of cotton seedlings by Pseudomonas fluorescens and its antibiotic pyoluteorin. Phytopathology 1980, 70:712-715.
19. Huang J., Bonsall R.F., Mavrodi D.V., Weller D.M., Thomashow L.S. Transformation of Pseudomonas fluorescens with genes for biosynthesis of phenazine-1-carboxylic acid improves biocontrol of Rhizoctonia root rot and in situ antibiotic production. FEMS Microbiology Ecology 2004, 49:243-251.
20. King E.O., Ward M.K., Raney D.E. Two simple media for the demonstration of pyocyanin and fluorescein. Journal of Laboratory and Clinical Medicine 1954, 44:301.
21. Kim D.-S., Cook R.J., Weller D.M. Bacillus sp. L324-92 for biological control of three root diseases of wheat growth with reduced tillage. Phytopathology 1997, 87:551-558.
22. Landa B.B., de Werd H.A.E., McSpadden Gardener B.B., Weller D.M. Comparison of three methods for monitoring populations of different genotypes of 2,4-diacetylphloroglucinol-producing Pseudomonas fluorescens in the rhizosphere. Phytopathology 2002, 92:129-137.
23. Landa B.B., Mavrodi O.V., Raaijmakers J.M., McSpadden Gardener B.B., Thomashow L.S., Weller D.M. Differential ability of genotypes of 2,4-diacetylphloroglucinol-producing Pseudomonas fluorescens strains to colonize the roots of pea plants. Applied and Environmental Microbiology 2002, 68:3226-3237.
24. Lugtenberg B.J.J., Dekkers L., Bloemberg G.V. Molecular determinants of rhizosphere colonization by Pseudomonas. Annual Review of Phytopathology 2001, 39:461-490.
25. Lugtenberg B., Kamilova F. Plant-growth-promoting rhizobacteria. Annual Review of Microbiology 2009, 63:541-556.
26. MacNish G.C., Neate S.M. Rhizoctonia bare patch of cereals: an Australian perspective. Plant Disease 1996, 80:965-971.
27. Mavrodi D.V., Mavrodi O.V., Parejko J., Bonsall R., Kwak Y., Paulitz T.C., Weller D.M., Thomashow L.S. Accumulation of the antibiotic phenazine-1-carboxylic acid in the rhizosphere of dryland wheat. Applied and Environmental Microbiology 2012, 78:804-812.
28. Mavrodi D.V., Mavrodi O.V., Parejko J.A., Weller D.M., Thomashow L.S. The role of 2,4-diacetylphloroglucinol- and phenazine-1-carboxylic acid-producing fluorescent Pseudomonas spp. in natural protection of wheat from soilborne pathogens. Bacteria in Agrobiology: Plant Nutrient Management 2011, 267-284. Springer, Germany. D.K. Maheshwari (Ed.).
29. Mavrodi O.V., McSpadden Gardener B.B., Mavrodi D.V., Bonsall R.F., Weller D.M., Thomashow L.S. Genetic diversity of phlD from 2,4-diacetylphloroglucinol-producing fluorescent Pseudomonas spp. Phytopathology 2001, 91:35-43.
30. McSpadden Gardener B.B., Gutierrez L.J., Joshi R., Edema R., Lutton E. Distribution and biocontrol potential of phlD+ pseudomonads in corn and soybean fields. Phytopathology 2005, 95:715-724.
31. McSpadden Gardener B.B., Mavrodi D.V., Thomashow L.S., Weller D.M. A rapid polymerase chain reaction-based assay characterizing rhizosphere populations of 2,4-diacetylphloroglucinol-producing bacteria. Phytopathology 2001, 91:44-54.
32. McSpadden Gardener B.B., Weller D.W. Changes in populations of rhizosphere bacteria associated with take-all disease of wheat. Applied and Environmental Microbiology 2001, 67:4414-4425.
33. Mircetich S.M., Kraft J.M. Efficiency of various selective media in determining Pythium population in soil. Mycopathology and Mycological Applications 1973, 50:151-161.
34. Nielsen T.H., Christophersen C., Anthonia U., Sørensen J. Viscosinamide, a new cyclic depsipeptide with surfactant and antifungal properties produced by Pseudomonas fluorescens DR54. Journal of Applied Microbiology 1999, 86:80-90.
35. Nybroe O., Sorensen J. Production of cyclic lipopeptides by fluorescent pseudomonads. Pseudomonas, Biosynthesis of Macromolecules and Molecular Metabolism 2004, 147-172. Kluwer Academic/Plenum Publishers, New York. J.-L. Ramos (Ed.).
36. Okubara P.A., Steber C.M., DeMacon V.L., Walter N.L., Paulitz T.C., Kidwell K.K. EMS-treated hexaploid wheat genotype Scarlet has enhanced tolerance to the soilborne necrotrophic pathogens Rhizoctonia solani AG-8 and R. oryzae. Theoretical and Applied Genetics 2009, 119:293-303.
37. Okubara P.A., Jones S.S. Seedling tolerance to Rhizoctonia and Pythium in wheat chromosome group 4 addition lines from Thinopyrum spp. Canadian Journal of Plant Pathology 2011, 33:415-422.
38. Paulitz T.C., Adams K. Composition and distribution of Pythium communities in wheat fields in eastern Washington state. Phytopathology 2003, 93:867-873.
39. Paulitz T.C., Smiley R.W., Cook R.J. Insights into the prevalence and management of soilborne cereal pathogens under direct seeding in the Pacific Northwest, USA. Canadian Journal of Plant Pathology 2002, 24:416-428.
40. Paulitz T.C., Schroeder K.L. A new method for the quantification of Rhizoctonia solani and R. oryzae from soil. Plant Disease 2005, 89:762-767.
41. Raaijmakers J.M., Bonsall R.F., Weller D.M. Effect of population density of Pseudomonas fluorescens on production of 2,4-diacetylphloroglucinol in the rhizosphere of wheat. Phytopathology 1999, 89:470-475.
42. Raaijmakers J.M., Leeman M., Vanoorschot M.M.P., Vandersluis I., Schippers B., Bakker P.A.H.M. Dose-response relationships in biological control of Fusarium-wilt of radish by Pseudomonas spp. Phytopathology 1995, 85:1075-1081.
43. Raaijmakers J.M., Vlami M., de Souza J. Antibiotic production by bacterial biocontrol strains. Antonie van Leewenhoek 2002, 81:537-547.
44. Raaijmakers J.M., Weller D.M. Natural plant protection by 2,4- diacetylphloroglucinol-producing Pseudomonas spp. in take-all decline soils. Molecular Plant-Microbe Interactions 1998, 11:144-152.
45. Raaijmakers J.M., Weller D.M. Exploiting genotypic diversity of 2,4-diacetylphloroglucinol-producing Pseudomonas spp.: characterization of superior root-colonizing P. fluorescens strain Q8r1-96. Applied and Environmental Microbiology 2001, 67:2545-2554.
46. Raaijmakers J.M., Weller D.M., Thomashow L.S. Frequency of antibiotic producing Pseudomonas spp. in natural environments. Applied and Environmental Microbiology 1997, 63:881-887.
47. Sacherer P., Défago G., Haas D. Extracellular protease and phospholipase-C are controlled by the global regulatory gene gacA in the biocontrol strain Pseudomonas fluorescens CHA0. FEMS Microbiological Letters 1994, 116:155-160.
48. SAS Institute, 2008. SAS 9.2, Cary, North Carolina.
49. Schroeder K.L., Paulitz T.C. Root diseases of wheat and barley during the transition from conventional tillage to direct seeding. Plant Disease 2006, 90:1247-1253.
50. Shiomi Y., Nishiyama M., Onizuka T., Marumoto T. Comparison of bacterial community structures in the rhizoplane of tomato plants grown in soils suppressive and conducive toward bacterial wilt. Applied and Environmental Microbiology 1999, 65:3996-4001.
51. Thrane C., Olsson S., Nielsen T.H., Sørensen J. Vital fluorescent strains for detection of stress in Pythium ultimum and Rhizoctonia solani challenged with viscosinamide from Pseudomonas fluorescens DR54. FEMS Microbiology Ecology 1999, 30:11-13.
52. van den Broek D., Bloemberg G.V., Lugtenberg B. The role of phenotypic variation in rhizosphere Pseduomonas bacteria. Environmental Microbiology 2005, 7:1686-1697.
53. Vyas P., Gulati A. Organic acid production in vitro and plant growth-promotion in maize under controlled environment by phosphate-solubilizing fluorescent Pseudomonas. BMC Microbiology 2009, 9:174.
54. Whipps J.M. Microbial interactions and biocontrol in the rhizosphere. Journal of Experimental Botany 2001, 52:487-511.
55. Weller D.M., Cook R.J. Suppression of take-all of wheat by seed treatments with fluorescent pseudomonads. Phytopathology 1983, 73:463-469.
56. Weller D.M., Cook R.J., MacNish G., Bassett E.N., Powelson R.L., Petersen R.R. Rhizoctonia root rot of small grains favored by reduced tillage in the Pacific Northwest. Plant Disease 1986, 70:70-73.
57. Weller D.M., Raaijmakers J.M., McSpadden Gardener B.B., Thomashow L.S. Microbial populations responsible for specific soil suppressiveness to plant pathogens. Annual Review of Phytopathology 2002, 40:309-348.