-
1
-
-
0030671163
-
Prp43: An RNA helicase-like factor involved in spliceosome disassembly
-
Arenas JE, Abelson JN. 1997. Prp43: An RNA helicase-like factor involved in spliceosome disassembly. Proc Natl Acad Sci 94: 11798-11802.
-
(1997)
Proc Natl Acad Sci
, vol.94
, pp. 11798-11802
-
-
Arenas, J.E.1
Abelson, J.N.2
-
2
-
-
0036747295
-
The ribosomal translocase homologue Snu114p is involved in unwinding U4/U6 RNA during activation of the spliceosome
-
DOI 10.1093/embo-reports/kvf172
-
Bartels C, Klatt C, Lührmann R, Fabrizio P. 2002. The ribosomal translocase homologue Snu114p is involved in unwinding U4/U6 RNA during activation of the spliceosome. EMBO Rep 3: 875-880. (Pubitemid 35154114)
-
(2002)
EMBO Reports
, vol.3
, Issue.9
, pp. 875-880
-
-
Bartels, C.1
Klatt, C.2
Luhrmann, R.3
Fabrizio, P.4
-
3
-
-
69049119194
-
Ntc90 is required for recruiting first step factor Yju2 but not for spliceosome activation
-
Chang KJ, Chen HC, Cheng SC. 2009. Ntc90 is required for recruiting first step factor Yju2 but not for spliceosome activation. RNA 15: 1729-1739.
-
(2009)
RNA
, vol.15
, pp. 1729-1739
-
-
Chang, K.J.1
Chen, H.C.2
Cheng, S.C.3
-
4
-
-
70350532246
-
Cwc25 is a novel splicing factor required after Prp2 and Yju2 to facilitate the first catalytic reaction
-
Chiu YF, Liu YC, Chiang TW, Yeh TC, Tseng CK, Wu NY, Cheng SC. 2009. Cwc25 is a novel splicing factor required after Prp2 and Yju2 to facilitate the first catalytic reaction. Mol Cell Biol 29: 5671-5678.
-
(2009)
Mol Cell Biol
, vol.29
, pp. 5671-5678
-
-
Chiu, Y.F.1
Liu, Y.C.2
Chiang, T.W.3
Yeh, T.C.4
Tseng, C.K.5
Wu, N.Y.6
Cheng, S.C.7
-
5
-
-
11244276986
-
Proteomic analysis identifies a new complex required for nuclear pre-mRNA retention and splicing
-
DOI 10.1038/sj.emboj.7600482
-
Dziembowski A, Ventura AP, Rutz B, Caspary F, Faux C, Halgand F, Laprevote O, Seraphin B. 2004. Proteomic analysis identifies a new complex required for nuclear pre-mRNA retention and splicing. EMBO J 23: 4847-4856. (Pubitemid 40069714)
-
(2004)
EMBO Journal
, vol.23
, Issue.24
, pp. 4847-4856
-
-
Dziembowski, A.1
Ventura, A.-P.2
Rutz, B.3
Caspary, F.4
Faux, C.5
Halgand, F.6
Laprevote, O.7
Seraphin, B.8
-
6
-
-
70449625597
-
The evolutionarily conserved core design of the catalytic activation step of the yeast spliceosome
-
Fabrizio P, Dannenberg J, Dube P, Kastner B, Stark H, Urlaub H, Lührmann R. 2009. The evolutionarily conserved core design of the catalytic activation step of the yeast spliceosome. Mol Cell 36: 593-608.
-
(2009)
Mol Cell
, vol.36
, pp. 593-608
-
-
Fabrizio, P.1
Dannenberg, J.2
Dube, P.3
Kastner, B.4
Stark, H.5
Urlaub, H.6
Lührmann, R.7
-
7
-
-
0035037814
-
Quantitative two-color fluorescence cross-correlation spectroscopy in the analysis of polymerase chain reaction
-
DOI 10.1515/BC.2001.057
-
Földes-Papp Z, Rigler R. 2001. Quantitative two-color fluorescence cross-correlation spectroscopy in the analysis of polymerase chain reaction. Biol Chem 382: 473-478. (Pubitemid 32372491)
-
(2001)
Biological Chemistry
, vol.382
, Issue.3
, pp. 473-478
-
-
Foldes-Papp, Z.1
Rigler, R.2
-
8
-
-
0037173615
-
Functional profiling of the Saccharomyces cerevisiae genome
-
DOI 10.1038/nature00935
-
Giaever G, Chu AM, Ni L, Connelly C, Riles L, Veronneau S, Dow S, Lucau-Danila A, Anderson K, Andre B, et al. 2002. Functional profiling of the Saccharomyces cerevisiae genome. Nature 418: 387-391. (Pubitemid 34826834)
-
(2002)
Nature
, vol.418
, Issue.6896
, pp. 387-391
-
-
Giaever, G.1
Chu, A.M.2
Ni, L.3
Connelly, C.4
Riles, L.5
Veronneau, S.6
Dow, S.7
Lucau-Danila, A.8
Anderson, K.9
Andre, B.10
Arkin, A.P.11
Astromoff, A.12
El, B.M.13
Bangham, R.14
Benito, R.15
Brachat, S.16
Campanaro, S.17
Curtiss, M.18
Davis, K.19
Deutschbauer, A.20
Entian, K.-D.21
Flaherty, P.22
Foury, F.23
Garfinkel, D.J.24
Gerstein, M.25
Gotte, D.26
Guldener, U.27
Hegemann, J.H.28
Hempel, S.29
Herman, Z.30
Jaramillo, D.F.31
Kelly, D.E.32
Kelly, S.L.33
Kotter, P.34
LaBonte, D.35
Lamb, D.C.36
Lan, N.37
Liang, H.38
Liao, H.39
Liu, L.40
Luo, C.41
Lussier, M.42
Mao, R.43
Menard, P.44
Ooi, S.L.45
Revuelta, J.L.46
Roberts, C.J.47
Rose, M.48
Ross-Macdonald, P.49
Scherens, B.50
Schimmack, G.51
Shafer, B.52
Shoemaker, D.D.53
Sookhai-Mahadeo, S.54
Storms, R.K.55
Strathern, J.N.56
Valle, G.57
Voet, M.58
Volckaert, G.59
Wang, C.-Y.60
Ward, T.R.61
Wilhelmy, J.62
Winzeler, E.A.63
Yang, Y.64
Yen, G.65
Youngman, E.66
Yu, K.67
Bussey, H.68
Boeke, J.D.69
Snyder, M.70
Philippsen, P.71
Davis, R.W.72
Johnston, M.73
more..
-
9
-
-
41449116844
-
Cwc24p, a novel Saccharomyces cerevisiae nuclear ring finger protein, affects pre-snoRNA U3 splicing
-
Goldfeder MB, Oliveira CC. 2008. Cwc24p, a novel Saccharomyces cerevisiae nuclear ring finger protein, affects pre-snoRNA U3 splicing. J Biol Chem 283: 2644-2653.
-
(2008)
J Biol Chem
, vol.283
, pp. 2644-2653
-
-
Goldfeder, M.B.1
Oliveira, C.C.2
-
10
-
-
0031878108
-
A potential role for U2AF-SAP 155 interactions in recruiting U2 snRNP to the branch site
-
Gozani O, Potashkin J, Reed R. 1998. A potential role for U2AF-SAP 155 interactions in recruiting U2 snRNP to the branch site. Mol Cell Biol 18: 4752-4760. (Pubitemid 28343060)
-
(1998)
Molecular and Cellular Biology
, vol.18
, Issue.8
, pp. 4752-4760
-
-
Gozani, O.1
Potashkin, J.2
Reed, R.3
-
11
-
-
34147179830
-
U2 toggles iteratively between the stem IIa and stem IIc conformations to promote pre-mRNA splicing
-
DOI 10.1101/gad.1536107
-
Hilliker AK, Mefford MA, Staley JP. 2007. U2 toggles iteratively between the stem IIa and stem IIc conformations to promote premRNA splicing. Genes Dev 21: 821-834. (Pubitemid 46572361)
-
(2007)
Genes and Development
, vol.21
, Issue.7
, pp. 821-834
-
-
Hilliker, A.K.1
Mefford, M.A.2
Staley, J.P.3
-
12
-
-
77955929156
-
The function of the NineTeen Complex (NTC) in regulating spliceosome conformations and fidelity during pre-mRNA splicing
-
Hogg R, McGrail JC, O'Keefe RT. 2010. The function of the NineTeen Complex (NTC) in regulating spliceosome conformations and fidelity during pre-mRNA splicing. Biochem Soc Trans 38: 1110-1115.
-
(2010)
Biochem Soc Trans
, vol.38
, pp. 1110-1115
-
-
Hogg, R.1
McGrail, J.C.2
O'Keefe, R.T.3
-
13
-
-
84861389921
-
The mechanism of the second step of pre-mRNA splicing
-
doi: 10.1002/wrna.112
-
Horowitz DS. 2011. The mechanism of the second step of pre-mRNA splicing. WIREs RNA doi: 10.1002/wrna.112.
-
(2011)
WIREs RNA
-
-
Horowitz, D.S.1
-
14
-
-
0036674909
-
How Slu7 and Prp18 cooperate in the second step of yeast pre-mRNA splicing
-
James SA, Turner W, Schwer B. 2002. How Slu7 and Prp18 cooperate in the second step of yeast pre-mRNA splicing. RNA 8: 1068-1077.
-
(2002)
RNA
, vol.8
, pp. 1068-1077
-
-
James, S.A.1
Turner, W.2
Schwer, B.3
-
15
-
-
0032539688
-
Real-time enzyme kinetics monitored by dual-color fluorescence cross-correlation spectroscopy
-
Kettling U, Koltermann A, Schwille P, Eigen M. 1998. Real-time enzyme kinetics monitored by dual-color fluorescence cross-correlation spectroscopy. Proc Natl Acad Sci 95: 1416-1420.
-
(1998)
Proc Natl Acad Sci
, vol.95
, pp. 1416-1420
-
-
Kettling, U.1
Koltermann, A.2
Schwille, P.3
Eigen, M.4
-
16
-
-
0029965552
-
Spliceosome activation by PRP2 ATPase prior to the first transesterification reaction of pre-mRNA splicing
-
Kim SH, Lin RJ. 1996. Spliceosome activation by PRP2 ATPase prior to the first transesterification reaction of pre-mRNA splicing. Mol Cell Biol 16: 6810-6819.
-
(1996)
Mol Cell Biol
, vol.16
, pp. 6810-6819
-
-
Kim, S.H.1
Lin, R.J.2
-
17
-
-
0026535919
-
The purified yeast premRNA splicing factor PRP2 is an RNA-dependent NTPase
-
Kim SH, Smith J, Claude A, Lin RJ. 1992. The purified yeast premRNA splicing factor PRP2 is an RNA-dependent NTPase. EMBO J 11: 2319-2326.
-
(1992)
EMBO J
, vol.11
, pp. 2319-2326
-
-
Kim, S.H.1
Smith, J.2
Claude, A.3
Lin, R.J.4
-
18
-
-
0025064910
-
Interactions of PRP2 protein with premRNA splicing complexes in Saccharomyces cerevisiae
-
King DS, Beggs JD. 1990. Interactions of PRP2 protein with premRNA splicing complexes in Saccharomyces cerevisiae. Nucleic Acids Res 18: 6559-6564.
-
(1990)
Nucleic Acids Res
, vol.18
, pp. 6559-6564
-
-
King, D.S.1
Beggs, J.D.2
-
19
-
-
77149180424
-
Release of SF3 from the intron branchpoint activates the first step of premRNA splicing
-
Lardelli RM, Thompson JX, Yates JR III, Stevens SW. 2010. Release of SF3 from the intron branchpoint activates the first step of premRNA splicing. RNA 16: 516-528.
-
(2010)
RNA
, vol.16
, pp. 516-528
-
-
Lardelli, R.M.1
Thompson, J.X.2
Yates III, J.R.3
Stevens, S.W.4
-
20
-
-
34547155595
-
A novel splicing factor, Yju2, is associated with NTC and acts after Prp2 in promoting the first catalytic reaction of pre-mRNA splicing
-
Liu YC, Chen HC, Wu NY, Cheng SC. 2007. A novel splicing factor, Yju2, is associated with NTC and acts after Prp2 in promoting the first catalytic reaction of pre-mRNA splicing. Mol Cell Biol 27: 5403-5413.
-
(2007)
Mol Cell Biol
, vol.27
, pp. 5403-5413
-
-
Liu, Y.C.1
Chen, H.C.2
Wu, N.Y.3
Cheng, S.C.4
-
21
-
-
0037980050
-
Spatial organization of protein-RNA interactions in the branch site-3′ splice site region during pre-mRNA splicing in yeast
-
DOI 10.1128/MCB.23.12.4174-4186.2003
-
McPheeters DS, Muhlenkamp P. 2003. Spatial organization of protein-RNA interactions in the branch site-3′ splice site region during pre-mRNA splicing in yeast. Mol Cell Biol 23: 4174-4186. (Pubitemid 36666422)
-
(2003)
Molecular and Cellular Biology
, vol.23
, Issue.12
, pp. 4174-4186
-
-
McPheeters, D.S.1
Muhlenkamp, P.2
-
22
-
-
0002340095
-
RNA-RNA interactions in nuclear pre-mRNA splicing
-
ed. M Grundberg-Manago, RW Simons, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Nilsen TW. 1998. RNA-RNA interactions in nuclear pre-mRNA splicing. In RNA structure and function (ed. M Grundberg-Manago, RW Simons), pp. 279-307. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(1998)
RNA Structure and Function
, pp. 279-307
-
-
Nilsen, T.W.1
-
23
-
-
0036118353
-
Proteomics analysis reveals stable multiprotein complexes in both fission and budding yeasts containing Myb-related Cdc5p/Cef1p, novel pre-mRNA splicing factors, and snRNAs
-
DOI 10.1128/MCB.22.7.2011-2024.2002
-
Ohi MD, Link AJ, Ren L, Jennings JL, McDonald WH, Gould KL. 2002. Proteomics analysis reveals stable multiprotein complexes in both fission and budding yeasts containing Myb-related Cdc5p/Cef1p, novel pre-mRNA splicing factors, and snRNAs. Mol Cell Biol 22: 2011-2024. (Pubitemid 34224610)
-
(2002)
Molecular and Cellular Biology
, vol.22
, Issue.7
, pp. 2011-2024
-
-
Ohi, M.D.1
Link, A.J.2
Ren, L.3
Jennings, J.L.4
McDonald, W.H.5
Gould, K.L.6
-
24
-
-
79960306815
-
Fluorescence cross-correlation spectroscopy reveals mechanistic insights into the effect of 29-O-methyl modified siRNAs in living cells
-
Ohrt T, Staroske W, Mutze J, Crell K, Landthaler M, Schwille P. 2011. Fluorescence cross-correlation spectroscopy reveals mechanistic insights into the effect of 29-O-methyl modified siRNAs in living cells. Biophys J 100: 2981-2990.
-
(2011)
Biophys J
, vol.100
, pp. 2981-2990
-
-
Ohrt, T.1
Staroske, W.2
Mutze, J.3
Crell, K.4
Landthaler, M.5
Schwille, P.6
-
25
-
-
34147174235
-
Rearrangement of competing U2 RNA helices within the spliceosome promotes multiple steps in splicing
-
DOI 10.1101/gad.1524307
-
Perriman RJ, Ares M Jr. 2007. Rearrangement of competing U2 RNA helices within the spliceosome promotes multiple steps in splicing. Genes Dev 21: 811-820. (Pubitemid 46572360)
-
(2007)
Genes and Development
, vol.21
, Issue.7
, pp. 811-820
-
-
Perriman, R.J.1
Ares Jr., M.2
-
26
-
-
0034841844
-
The tandem affinity purification (TAP) method: A general procedure of protein complex purification
-
DOI 10.1006/meth.2001.1183
-
Puig O, Caspary F, Rigaut G, Rutz B, Bouveret E, Bragado-Nilsson E, Wilm M, Séraphin B. 2001. The tandem affinity purification (TAP) method: A general procedure of protein complex purification. Methods 24: 218-229. (Pubitemid 32846428)
-
(2001)
Methods
, vol.24
, Issue.3
, pp. 218-229
-
-
Puig, O.1
Caspary, F.2
Rigaut, G.3
Rutz, B.4
Bouveret, E.5
Bragado-Nilsson, E.6
Wilm, M.7
Seraphin, B.8
-
27
-
-
0029312195
-
The final stages of spliceosome maturation require Spp2p that can interact with the DEAH box protein Prp2p and promote step 1 of splicing
-
Roy J, Kim K, Maddock JR, Anthony JG, Woolford JL Jr. 1995. The final stages of spliceosome maturation require Spp2p that can interact with the DEAH box protein Prp2p and promote step 1 of splicing. RNA 1: 375-390.
-
(1995)
RNA
, vol.1
, pp. 375-390
-
-
Roy, J.1
Kim, K.2
Maddock, J.R.3
Anthony, J.G.4
Woolford Jr., J.L.5
-
28
-
-
0032055765
-
Prp22, a DExH-box RNA helicase, plays two distinct roles in yeast pre-mRNA splicing
-
DOI 10.1093/emboj/17.7.2086
-
Schwer B, Gross CH. 1998. Prp22, a DExH-box RNA helicase, plays two distinct roles in yeast pre-mRNA splicing. EMBO J 17: 2086-2094. (Pubitemid 28154537)
-
(1998)
EMBO Journal
, vol.17
, Issue.7
, pp. 2086-2094
-
-
Schwer, B.1
Gross, C.H.2
-
29
-
-
8644284892
-
Interaction between a G-patch protein and a spliceosomal DEXD/H-box ATPase that is critical for splicing
-
DOI 10.1128/MCB.24.23.10101-10110.2004
-
Silverman EJ, Maeda A, Wei J, Smith P, Beggs JD, Lin RJ. 2004. Interaction between a G-patch protein and a spliceosomal DEXD/H-box ATPase that is critical for splicing. Mol Cell Biol 24: 10101-10110. (Pubitemid 39507850)
-
(2004)
Molecular and Cellular Biology
, vol.24
, Issue.23
, pp. 10101-10110
-
-
Silverman, E.J.1
Maeda, A.2
Wei, J.3
Smith, P.4
Beggs, J.D.5
Lin, R.-J.6
-
30
-
-
33746441457
-
The EF-G-like GTPase Snu114p Regulates Spliceosome Dynamics Mediated by Brr2p, a DExD/H Box ATPase
-
DOI 10.1016/j.molcel.2006.05.043, PII S1097276506004138
-
Small EC, Leggett SR, Winans AA, Staley JP. 2006. The EF-G-like GTPase Snu114p regulates spliceosome dynamics mediated by Brr2p, a DExD/H box ATPase. Mol Cell 23: 389-399. (Pubitemid 44128846)
-
(2006)
Molecular Cell
, vol.23
, Issue.3
, pp. 389-399
-
-
Small, E.C.1
Leggett, S.R.2
Winans, A.A.3
Staley, J.P.4
-
31
-
-
0032489021
-
Mechanical devices of the spliceosome: Motors, clocks, springs, and things
-
DOI 10.1016/S0092-8674(00)80925-3
-
Staley JP, Guthrie C. 1998. Mechanical devices of the spliceosome: Motors, clocks, springs, and things. Cell 92: 315-326. (Pubitemid 28093010)
-
(1998)
Cell
, vol.92
, Issue.3
, pp. 315-326
-
-
Staley, J.P.1
Guthrie, C.2
-
32
-
-
0028158655
-
The splicing factor PRP2, a putative RNA helicase, interacts directly with pre-mRNA
-
Teigelkamp S, McGarvey M, Plumpton M, Beggs JD. 1994. The splicing factor PRP2, a putative RNA helicase, interacts directly with pre-mRNA. EMBO J 13: 888-897. (Pubitemid 24057520)
-
(1994)
EMBO Journal
, vol.13
, Issue.4
, pp. 888-897
-
-
Teigelkamp, S.1
McGarvey, M.2
Plumpton, M.3
Beggs, J.D.4
-
33
-
-
0033515542
-
Cef1p is a component of the Prp19p-associated complex and essential for pre-mRNA splicing
-
Tsai WY, Chow YT, Chen HR, Huang KT, Hong RI, Jan SP, Kuo NY, Tsao TY, Chen CH, Cheng SC. 1999. Cef1p is a component of the Prp19p-associated complex and essential for pre-mRNA splicing. J Biol Chem 274: 9455-9462.
-
(1999)
J Biol Chem
, vol.274
, pp. 9455-9462
-
-
Tsai, W.Y.1
Chow, Y.T.2
Chen, H.R.3
Huang, K.T.4
Hong, R.I.5
Jan, S.P.6
Kuo, N.Y.7
Tsao, T.Y.8
Chen, C.H.9
Cheng, S.C.10
-
34
-
-
60349104299
-
The spliceosome: Design principles of a dynamic RNP machine
-
Wahl MC, Will CL, Lührmann R. 2009. The spliceosome: Design principles of a dynamic RNP machine. Cell 136: 701-718.
-
(2009)
Cell
, vol.136
, pp. 701-718
-
-
Wahl, M.C.1
Will, C.L.2
Lührmann, R.3
-
35
-
-
71449119694
-
Reconstitution of both steps of Saccharomyces cerevisiae splicing with purified spliceosomal components
-
Warkocki Z, Odenwälder P, Schmitzová J, Platzmann F, Stark H, Urlaub H, Ficner R, Fabrizio P, Lührmann R. 2009. Reconstitution of both steps of Saccharomyces cerevisiae splicing with purified spliceosomal components. Nat Struct Mol Biol 16: 1237-1243.
-
(2009)
Nat Struct Mol Biol
, vol.16
, pp. 1237-1243
-
-
Warkocki, Z.1
Odenwälder, P.2
Schmitzová, J.3
Platzmann, F.4
Stark, H.5
Urlaub, H.6
Ficner, R.7
Fabrizio, P.8
Lührmann, R.9
-
36
-
-
79959406036
-
Spliceosome structure and function
-
ed. RF Gesteland et al., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Will CL, Lührmann R. 2011. Spliceosome structure and function. In RNA World (ed. RF Gesteland et al.), pp. 181-203. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(2011)
RNA World
, pp. 181-203
-
-
Will, C.L.1
Lührmann, R.2
-
37
-
-
0033529707
-
Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis
-
Winzeler EA, Shoemaker DD, Astromoff A, Liang H, Anderson K, Andre B, Bangham R, Benito R, Boeke JD, Bussey H, et al. 1999. Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis. Science 285: 901-906.
-
(1999)
Science
, vol.285
, pp. 901-906
-
-
Winzeler, E.A.1
Shoemaker, D.D.2
Astromoff, A.3
Liang, H.4
Anderson, K.5
Andre, B.6
Bangham, R.7
Benito, R.8
Boeke, J.D.9
Bussey, H.10
-
38
-
-
0025941556
-
U4 small nuclear RNA dissociates from a yeast spliceosome and does not participate in the subsequent splicing reaction
-
Yean SL, Lin RJ. 1991. U4 small nuclear RNA dissociates from a yeast spliceosome and does not participate in the subsequent splicing reaction. Mol Cell Biol 11: 5571-5577.
-
(1991)
Mol Cell Biol
, vol.11
, pp. 5571-5577
-
-
Yean, S.L.1
Lin, R.J.2
|