Co-localized or randomly distributed? pair cross correlation of in vivo grown subgingival biofilm bacteria quantified by digital image analysis

PLoS ONE

Volumn 7, Issue 5, 2012, Pages

  Schillinger, Claudia ^a   Petrich, Annett ^a   Lux, Renate ^b   Riep, Birgit ^a   Kikhney, Judith ^a   Friedmann, Anton ^c   Wolinsky, Lawrence E ^d   Göbel, Ulf B ^a   Daims, Holger ^e   Moter, Annette ^a  

^a CHARITÉ UNIVERSITÄTSMEDIZIN BERLIN   (Germany)

^b UCLA SCHOOL OF DENTISTRY   (United States)

^c UNIVERSITY OF WITTEN HERDECKE   (Germany)

^d BAYLOR COLLEGE OF DENTISTRY   (United States)

^e UNIVERSITY OF VIENNA   (Austria)

Author keywords

[No Author keywords available]

Indexed keywords

ADULT; ARTICLE; BACTERIUM; BACTERIUM ADHERENCE; BIOFILM; BIOMASS; CLINICAL ARTICLE; CONTROLLED STUDY; CORRELATION ANALYSIS; CROSS REACTION; DISEASE ASSOCIATION; FEMALE; FUSOBACTERIUM NUCLEATUM; HUMAN; IMAGE ANALYSIS; IN VITRO STUDY; IN VIVO STUDY; MALE; MICROBIOLOGICAL PARAMETERS; NONHUMAN; ORGANISMAL INTERACTION; PERIODONTICS; PORPHYROMONAS GINGIVALIS; PREVOTELLA INTERMEDIA; QUANTITATIVE ANALYSIS; SINGLE CELL ANALYSIS; TANNERELLA FORSYTHENSIS; BACTERIAL COUNT; BACTEROIDES; COMPUTER PROGRAM; GROWTH, DEVELOPMENT AND AGING; IMAGE PROCESSING; MICROBIOLOGY; PERIODONTAL DISEASE; PERIODONTAL POCKET;

BACTERIA (MICROORGANISMS); FORSYTHIA; FUSOBACTERIUM NUCLEATUM; PORPHYROMONAS GINGIVALIS; PREVOTELLA INTERMEDIA; TANNERELLA FORSYTHENSIS;

BACTEROIDES; BIOFILMS; COLONY COUNT, MICROBIAL; FEMALE; FUSOBACTERIUM NUCLEATUM; HUMANS; IMAGE PROCESSING, COMPUTER-ASSISTED; MALE; PERIODONTAL DISEASES; PERIODONTAL POCKET; PORPHYROMONAS GINGIVALIS; PREVOTELLA INTERMEDIA; SOFTWARE;

EID: 84861385978     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0037583     Document Type: Article

References (57)

1. Inaba H, Amano A, (2010) Roles of oral bacteria in cardiovascular diseases-from molecular mechanisms to clinical cases: Implication of periodontal diseases in development of systemic diseases. J Pharmacol Sci 113: 103-109.
2. Seymour RA, (2010) Does periodontal treatment improve general health? Dent Update 37: 206-208, 210-202.
3. Wimmer G, Pihlstrom BL, (2008) A critical assessment of adverse pregnancy outcome and periodontal disease. J Clin Periodontol 35: 380-397.
4. Listgarten MA, Mayo H, Amsterdam M, (1973) Ultrastructure of the attachment device between coccal and filamentous microorganisms in "corn cob" formations of dental plaque. Arch Oral Biol 18: 651-656.
5. Listgarten MA, Mayo HE, Tremblay R, (1975) Development of dental plaque on epoxy resin crowns in man. A light and electron microscopic study. J Periodontol 46: 10-26.
6. Listgarten MA, (1976) Structure of the microbial flora associated with periodontal health and disease in man. A light and electron microscopic study. J Periodontol 47: 1-18.
7. Listgarten MA, (1999) Formation of dental plaque and other oral biofilms. In: Newman HN, Wilson M, editors. Dental plaque revisited: oral biofilms in health and disease Cardiff, UK pp. Bioline.187-210.
8. Paster BJ, Olsen I, Aas JA, Dewhirst FE, (2006) The breadth of bacterial diversity in the human periodontal pocket and other oral sites. Periodontol 2000 42: 80-87.
9. Dewhirst FE, Chen T, Izard J, Paster BJ, Tanner AC, et al. (2010) The Human Oral Microbiome. J Bacteriol.
10. Armitage GC, (2010) Comparison of the microbiological features of chronic and aggressive periodontitis. Periodontol 2000 53: 70-88.
11. Kumar PS, Griffen AL, Barton JA, Paster BJ, Moeschberger ML, et al. (2003) New bacterial species associated with chronic periodontitis. J Dent Res 82: 338-344.
12. Kumar PS, Leys EJ, Bryk JM, Martinez FJ, Moeschberger ML, et al. (2006) Changes in periodontal health status are associated with bacterial community shifts as assessed by quantitative 16S cloning and sequencing. J Clin Microbiol 44: 3665-3673.
13. Drescher J, Schlafer S, Schaudinn C, Riep B, Neumann K, et al. (2010) Molecular epidemiology and spatial distribution of Selenomonas spp. in subgingival biofilms. Eur J Oral Sci 118: 466-474.
14. Schlafer S, Riep B, Griffen AL, Petrich A, Hubner J, et al. (2010) Filifactor alocis-involvement in periodontal biofilms. BMC Microbiol 10: 66.
15. Wade WG, (2010) New aspects and new concepts of maintaining "microbiological" health. J Dent 38 (Suppl 1): S21-25.
16. Socransky SS, Haffajee AD, Dzink JL, (1988) Relationship of subgingival microbial complexes to clinical features at the sampled sites. J Clin Periodontol 15: 440-444.
17. Socransky SS, Haffajee AD, Cugini MA, Smith C, Kent RL Jr, (1998) Microbial complexes in subgingival plaque. J Clin Periodontol 25: 134-144.
18. Cisar JO, Kolenbrander PE, McIntire FC, (1979) Specificity of coaggregation reactions between human oral streptococci and strains of Actinomyces viscosus or Actinomyces naeslundii. Infect Immun 24: 742-752.
19. Kolenbrander PE, (1988) Intergeneric coaggregation among human oral bacteria and ecology of dental plaque. Annu Rev Microbiol 42: 627-656.
20. Kolenbrander PE, London J, (1993) Adhere today, here tomorrow: oral bacterial adherence. J Bacteriol 175: 3247-3252.
21. Kolenbrander PE, (2000) Oral microbial communities: biofilms, interactions, and genetic systems. Annu Rev Microbiol 54: 413-437.
22. Kolenbrander PE, Andersen RN, Blehert DS, Egland PG, Foster JS, et al. (2002) Communication among oral bacteria. Microbiol Mol Biol Rev 66 486-505, table of contents.
23. Kolenbrander PE, Palmer RJ Jr, Rickard AH, Jakubovics NS, Chalmers NI, et al. (2006) Bacterial interactions and successions during plaque development. Periodontol 2000 42: 47-79.
24. Kolenbrander PE, Palmer RJ Jr, Periasamy S, Jakubovics NS, (2010) Oral multispecies biofilm development and the key role of cell-cell distance. Nat Rev Microbiol 8: 471-480.
25. Nagaoka S, Hojo K, Murata S, Mori T, Ohshima T, et al. (2008) Interactions between salivary Bifidobacterium adolescentis and other oral bacteria: in vitro coaggregation and coadhesion assays. FEMS Microbiol Lett 281: 183-189.
26. Sharma A, Inagaki S, Sigurdson W, Kuramitsu HK, (2005) Synergy between Tannerella forsythia and Fusobacterium nucleatum in biofilm formation. Oral Microbiol Immunol 20: 39-42.
27. Yamada M, Ikegami A, Kuramitsu HK, (2005) Synergistic biofilm formation by Treponema denticola and Porphyromonas gingivalis. FEMS Microbiol Lett 250: 271-277.
28. Diaz PI, Chalmers NI, Rickard AH, Kong C, Milburn CL, et al. (2006) Molecular characterization of subject-specific oral microflora during initial colonization of enamel. Appl Environ Microbiol 72: 2837-2848.
29. Palmer RJ Jr, Diaz PI, Kolenbrander PE, (2006) Rapid succession within the Veillonella population of a developing human oral biofilm in situ. J Bacteriol 188: 4117-4124.
30. Palmer RJ Jr, Gordon SM, Cisar JO, Kolenbrander PE, (2003) Coaggregation-mediated interactions of streptococci and actinomyces detected in initial human dental plaque. J Bacteriol 185: 3400-3409.
31. Noiri Y, Ozaki K, Nakae H, Matsuo T, Ebisu S, (1997) An immunohistochemical study on the localization of Porphyromonas gingivalis, Campylobacter rectus and Actinomyces viscosus in human periodontal pockets. J Periodontal Res 32: 598-607.
32. Noiri Y, Ehara A, Kawahara T, Takemura N, Ebisu S, (2002) Participation of bacterial biofilms in refractory and chronic periapical periodontitis. J Endod 28: 679-683.
33. Zijnge V, van Leeuwen MB, Degener JE, Abbas F, Thurnheer T, et al. (2010) Oral biofilm architecture on natural teeth. PLoS One 5: e9321.
34. Marsh PD, Moter A, Devine DA, (2011) Dental plaque biofilms: communities, conflict and control. Periodontol 2000 55: 16-35.
35. Kumar PS, Griffen AL, Moeschberger ML, Leys EJ, (2005) Identification of candidate periodontal pathogens and beneficial species by quantitative 16S clonal analysis. J Clin Microbiol 43: 3944-3955.
36. Riep B, Edesi-Neuss L, Claessen F, Skarabis H, Ehmke B, et al. (2009) Are putative periodontal pathogens reliable diagnostic markers? J Clin Microbiol 47: 1705-1711.
37. Guggenheim B, Gmur R, Galicia JC, Stathopoulou PG, Benakanakere MR, et al. (2009) In vitro modeling of host-parasite interactions: the 'subgingival' biofilm challenge of primary human epithelial cells. BMC Microbiol 9: 280.
38. Palmer RJ Jr, (2010) Supragingival and subgingival plaque: paradigm of biofilms. Compend Contin Educ Dent 31: 104-106, 108, 110 passim; quiz 124, 138.
39. Marsh PD, (2010) Controlling the oral biofilm with antimicrobials. J Dent 38 (Suppl 1): S11-15.
40. Valm AM, Welch JL, Rieken CW, Hasegawa Y, Sogin ML, et al. (2011) Systems-level analysis of microbial community organization through combinatorial labeling and spectral imaging. Proc Natl Acad Sci U S A 108: 4152-4157.
41. Wecke J, Kersten T, Madela K, Moter A, Gobel UB, et al. (2000) A novel technique for monitoring the development of bacterial biofilms in human periodontal pockets. FEMS Microbiol Lett 191: 95-101.
42. Kamaguchi A, Ohyama T, Sakai E, Nakamura R, Watanabe T, et al. (2003) Adhesins encoded by the gingipain genes of Porphyromonas gingivalis are responsible for co-aggregation with Prevotella intermedia. Microbiology 149: 1257-1264.
43. Kolenbrander PE, Andersen RN, Holdeman LV, (1985) Coaggregation of oral Bacteroides species with other bacteria: central role in coaggregation bridges and competitions. Infect Immun 48: 741-746.
44. Daims H, Lucker S, Wagner M, (2006) daime, a novel image analysis program for microbial ecology and biofilm research. Environ Microbiol 8: 200-213.
45. Reed MG, Howard CV, (1999) Stereological estimation of covariance using linear dipole probes. J Microsc 195: 96-103.
46. Maixner F, Noguera DR, Anneser B, Stoecker K, Wegl G, et al. (2006) Nitrite concentration influences the population structure of Nitrospira-like bacteria. Environ Microbiol 8: 1487-1495.
47. Augspurger C, Karwautz C, Mussmann M, Daims H, Battin TJ, (2010) Drivers of bacterial colonization patterns in stream biofilms. FEMS Microbiol Ecol 72: 47-57.
48. Kara D, Luppens SB, van Marle J, Ozok R, ten Cate JM, (2007) Microstructural differences between single-species and dual-species biofilms of Streptococcus mutans and Veillonella parvula, before and after exposure to chlorhexidine. FEMS Microbiol Lett 271: 90-97.
49. Armitage GC, (1999) Development of a classification system for periodontal diseases and conditions. Ann Periodontol 4: 1-6.
50. Moter A, Leist G, Rudolph R, Schrank K, Choi BK, et al. (1998) Fluorescence in situ hybridization shows spatial distribution of as yet uncultured treponemes in biopsies from digital dermatitis lesions. Microbiology 144 (Pt 9): 2459-2467.
51. Loy A, Horn M, Wagner M, (2003) probeBase: an online resource for rRNA-targeted oligonucleotide probes. Nucleic Acids Res 31: 514-516.
52. Sunde PT, Olsen I, Gobel UB, Theegarten D, Winter S, et al. (2003) Fluorescence in situ hybridization (FISH) for direct visualization of bacteria in periapical lesions of asymptomatic root-filled teeth. Microbiology 149: 1095-1102.
53. Daims H, Wagner M, (2011) In situ techniques and digital image analysis methods for quantifying spatial localization patterns of nitrifiers and other microorganisms in biofilm and flocs. Methods Enzymol 496: 185-215.
54. Honma K, Mishima E, Inagaki S, Sharma A, (2009) The OxyR homologue in Tannerella forsythia regulates expression of oxidative stress responses and biofilm formation. Microbiology 155: 1912-1922.
55. Kirschbaum M, Schultze-Mosgau S, Pfister W, Eick S, (2010) Mixture of periodontopathogenic bacteria influences interaction with KB cells. Anaerobe.
56. Suzuki N, Yoshida A, Saito T, Kawada M, Nakano Y, (2004) Quantitative microbiological study of subgingival plaque by real-time PCR shows correlation between levels of Tannerella forsythensis and Fusobacterium spp. J Clin Microbiol 42: 2255-2257.
57. Wagner M, (2009) Single-cell ecophysiology of microbes as revealed by Raman microspectroscopy or secondary ion mass spectrometry imaging. Annu Rev Microbiol 63: 411-429.