-
1
-
-
65649125644
-
Nuclear RNA surveillance: no sign of substrates tailing off
-
Anderson JT, Wang X. 2009. Nuclear RNA surveillance: no sign of substrates tailing off. Crit. Rev. Biochem. Mol. Biol. 44:16-24.
-
(2009)
Crit. Rev. Biochem. Mol. Biol.
, vol.44
, pp. 16-24
-
-
Anderson, J.T.1
Wang, X.2
-
2
-
-
33344478052
-
Regulation of yeast NRD1 expression by premature transcription termination
-
Arigo JT, Carroll KL, Ames JM, Corden JL. 2006. Regulation of yeast NRD1 expression by premature transcription termination. Mol. Cell 21: 641-651.
-
(2006)
Mol. Cell
, vol.21
, pp. 641-651
-
-
Arigo, J.T.1
Carroll, K.L.2
Ames, J.M.3
Corden, J.L.4
-
3
-
-
33748424364
-
Termination of cryptic unstable transcripts is directed by yeast RNA-binding proteins Nrd1 and Nab3
-
Arigo JT, Eyler DE, Carroll KL, Corden JL. 2006. Termination of cryptic unstable transcripts is directed by yeast RNA-binding proteins Nrd1 and Nab3. Mol. Cell 23:841-851.
-
(2006)
Mol. Cell
, vol.23
, pp. 841-851
-
-
Arigo, J.T.1
Eyler, D.E.2
Carroll, K.L.3
Corden, J.L.4
-
4
-
-
0024674331
-
Cell size modulation by CDC25 and RAS2 genes in Saccharomyces cerevisiae
-
Baroni MD, Martegani E, Monti P, Alberghina L. 1989. Cell size modulation by CDC25 and RAS2 genes in Saccharomyces cerevisiae. Mol. Cell. Biol. 9:2715-2723.
-
(1989)
Mol. Cell. Biol.
, vol.9
, pp. 2715-2723
-
-
Baroni, M.D.1
Martegani, E.2
Monti, P.3
Alberghina, L.4
-
5
-
-
0027984898
-
Repression of growthregulated G1 cyclin expression by cyclic AMP in budding yeast
-
Baroni MD, Monti P, Alberghina L. 1994. Repression of growthregulated G1 cyclin expression by cyclic AMP in budding yeast. Nature 371:339-342.
-
(1994)
Nature
, vol.371
, pp. 339-342
-
-
Baroni, M.D.1
Monti, P.2
Alberghina, L.3
-
6
-
-
43049146539
-
Toward a comprehensive temperature-sensitive mutant repository of the essential genes of Saccharomyces cerevisiae
-
Ben-Aroya S, et al. 2008. Toward a comprehensive temperature-sensitive mutant repository of the essential genes of Saccharomyces cerevisiae. Mol. Cell 30:248-258.
-
(2008)
Mol. Cell
, vol.30
, pp. 248-258
-
-
Ben-Aroya, S.1
-
7
-
-
43249104958
-
An increase in mitochondrial DNA promotes nuclear DNA replication in yeast
-
Blank HM, et al. 2008. An increase in mitochondrial DNA promotes nuclear DNA replication in yeast. PLoS Genet. 4:e1000047.
-
(2008)
PLoS Genet
, vol.4
-
-
Blank, H.M.1
-
8
-
-
0032579440
-
Designer deletion strains derived from Saccharomyces cerevisiae S288C: a useful set of strains and plasmids for PCRmediated gene disruption and other applications
-
Brachmann CB, et al. 1998. Designer deletion strains derived from Saccharomyces cerevisiae S288C: a useful set of strains and plasmids for PCRmediated gene disruption and other applications. Yeast 14:115-132.
-
(1998)
Yeast
, vol.14
, pp. 115-132
-
-
Brachmann, C.B.1
-
9
-
-
77956047670
-
Analyzing P-bodies and stress granules in Saccharomyces cerevisiae
-
Buchan JR, Nissan T, Parker R. 2010. Analyzing P-bodies and stress granules in Saccharomyces cerevisiae. Methods Enzymol. 470:619-640.
-
(2010)
Methods Enzymol
, vol.470
, pp. 619-640
-
-
Buchan, J.R.1
Nissan, T.2
Parker, R.3
-
10
-
-
72149095755
-
Eukaryotic stress granules: the ins and outs of translation
-
Buchan JR, Parker R. 2009. Eukaryotic stress granules: the ins and outs of translation. Mol. Cell 36:932-941.
-
(2009)
Mol. Cell
, vol.36
, pp. 932-941
-
-
Buchan, J.R.1
Parker, R.2
-
11
-
-
79251554956
-
Stress-specific composition, assembly and kinetics of stress granules in Saccharomyces cerevisiae
-
Buchan JR, Yoon JH, Parker R. 2011. Stress-specific composition, assembly and kinetics of stress granules in Saccharomyces cerevisiae. J. Cell Sci. 124:228-239.
-
(2011)
J. Cell Sci.
, vol.124
, pp. 228-239
-
-
Buchan, J.R.1
Yoon, J.H.2
Parker, R.3
-
12
-
-
70449641057
-
Progression through the RNA polymerase II CTD cycle
-
Buratowski S. 2009. Progression through the RNA polymerase II CTD cycle. Mol. Cell 36:541-546.
-
(2009)
Mol. Cell
, vol.36
, pp. 541-546
-
-
Buratowski, S.1
-
13
-
-
44949195905
-
Inactivation of cleavage factor I components Rna14p and Rna15p induces sequestration of small nucleolar ribonucleoproteins at discrete sites in the nucleus
-
Carneiro T, et al. 2008. Inactivation of cleavage factor I components Rna14p and Rna15p induces sequestration of small nucleolar ribonucleoproteins at discrete sites in the nucleus. Mol. Biol. Cell 19:1499-1508.
-
(2008)
Mol. Biol. Cell
, vol.19
, pp. 1499-1508
-
-
Carneiro, T.1
-
14
-
-
33847284995
-
Interaction of yeast RNA-binding proteins Nrd1 and Nab3 with RNA polymerase II terminator elements
-
Carroll KL, Ghirlando R, Ames JM, Corden JL. 2007. Interaction of yeast RNA-binding proteins Nrd1 and Nab3 with RNA polymerase II terminator elements. RNA 13:361-373.
-
(2007)
RNA
, vol.13
, pp. 361-373
-
-
Carroll, K.L.1
Ghirlando, R.2
Ames, J.M.3
Corden, J.L.4
-
15
-
-
3042796191
-
Identification of cis elements directing termination of yeast nonpolyadenylated snoRNA transcripts
-
Carroll KL, Pradhan DA, Granek JA, Clarke ND, Corden JL. 2004. Identification of cis elements directing termination of yeast nonpolyadenylated snoRNA transcripts. Mol. Cell. Biol. 24:6241-6252.
-
(2004)
Mol. Cell. Biol.
, vol.24
, pp. 6241-6252
-
-
Carroll, K.L.1
Pradhan, D.A.2
Granek, J.A.3
Clarke, N.D.4
Corden, J.L.5
-
16
-
-
0033619153
-
Signalling between mitochondria and the nucleus regulates the expression of a new D-lactate dehydrogenase activity in yeast
-
Chelstowska A, Liu Z, Jia Y, Amberg D, Butow RA. 1999. Signalling between mitochondria and the nucleus regulates the expression of a new D-lactate dehydrogenase activity in yeast. Yeast 15:1377-1391.
-
(1999)
Yeast
, vol.15
, pp. 1377-1391
-
-
Chelstowska, A.1
Liu, Z.2
Jia, Y.3
Amberg, D.4
Butow, R.A.5
-
17
-
-
33847778786
-
Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry
-
Chi A, et al. 2007. Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry. Proc. Natl. Acad. Sci. U. S. A. 104:2193-2198.
-
(2007)
Proc. Natl. Acad. Sci. U. S. A.
, vol.104
, pp. 2193-2198
-
-
Chi, A.1
-
18
-
-
0033975560
-
A yeast heterogeneous nuclear ribonucleoprotein complex associated with RNA polymerase II
-
Conrad NK, et al. 2000. A yeast heterogeneous nuclear ribonucleoprotein complex associated with RNA polymerase II. Genetics 154:557-571.
-
(2000)
Genetics
, vol.154
, pp. 557-571
-
-
Conrad, N.K.1
-
19
-
-
80054759888
-
Transcriptome-wide binding sites for components of the Saccharomyces cerevisiae non-poly(A) termination pathway: Nrd1, Nab3, and Sen1
-
Creamer TJ, et al. 2011. Transcriptome-wide binding sites for components of the Saccharomyces cerevisiae non-poly(A) termination pathway: Nrd1, Nab3, and Sen1. PLoS Genet. 7:e1002329.
-
(2011)
PLoS Genet
, vol.7
-
-
Creamer, T.J.1
-
20
-
-
0023797125
-
DAF1, a mutant gene affecting size control, pheromone arrest, and cell cycle kinetics of Saccharomyces cerevisiae
-
Cross FR. 1988. DAF1, a mutant gene affecting size control, pheromone arrest, and cell cycle kinetics of Saccharomyces cerevisiae. Mol. Cell. Biol. 8:4675-4684.
-
(1988)
Mol. Cell. Biol.
, vol.8
, pp. 4675-4684
-
-
Cross, F.R.1
-
21
-
-
0030669030
-
Exploring the metabolic and genetic control of gene expression on a genomic scale
-
DeRisi JL, Iyer VR, Brown PO. 1997. Exploring the metabolic and genetic control of gene expression on a genomic scale. Science 278:680-686.
-
(1997)
Science
, vol.278
, pp. 680-686
-
-
DeRisi, J.L.1
Iyer, V.R.2
Brown, P.O.3
-
22
-
-
12144280303
-
Mdm31 and Mdm32 are inner membrane proteins required for maintenance of mitochondrial shape and stability of mitochondrial DNA nucleoids in yeast
-
Dimmer KS, Jakobs S, Vogel F, Altmann K, Westermann B. 2005. Mdm31 and Mdm32 are inner membrane proteins required for maintenance of mitochondrial shape and stability of mitochondrial DNA nucleoids in yeast. J. Cell Biol. 168:103-115.
-
(2005)
J. Cell Biol.
, vol.168
, pp. 103-115
-
-
Dimmer, K.S.1
Jakobs, S.2
Vogel, F.3
Altmann, K.4
Westermann, B.5
-
23
-
-
0036081355
-
Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
-
Edgar R, Domrachev M, Lash AE. 2002. Gene Expression Omnibus: NCBI gene expression and hybridization array data repository. Nucleic Acids Res. 30:207-210.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 207-210
-
-
Edgar, R.1
Domrachev, M.2
Lash, A.E.3
-
24
-
-
49449105283
-
Phosphorylation of the RNA polymerase II C-terminal domain dictates transcription termination choice
-
Gudipati RK, Villa T, Boulay J, Libri D. 2008. Phosphorylation of the RNA polymerase II C-terminal domain dictates transcription termination choice. Nat. Struct. Mol. Biol. 15:786-794.
-
(2008)
Nat. Struct. Mol. Biol.
, vol.15
, pp. 786-794
-
-
Gudipati, R.K.1
Villa, T.2
Boulay, J.3
Libri, D.4
-
25
-
-
0032479988
-
Regulation of the Cln3-Cdc28 kinase by cAMP in Saccharomyces cerevisiae
-
Hall DD, Markwardt DD, Parviz F, Heideman W. 1998. Regulation of the Cln3-Cdc28 kinase by cAMP in Saccharomyces cerevisiae. EMBO J. 17:4370-4378.
-
(1998)
EMBO J
, vol.17
, pp. 4370-4378
-
-
Hall, D.D.1
Markwardt, D.D.2
Parviz, F.3
Heideman, W.4
-
26
-
-
77749330772
-
Identification and analysis of the interaction between Edc3 and Dcp2 in Saccharomyces cerevisiae
-
Harigaya Y, Jones BN, Muhlrad D, Gross JD, Parker R. 2010. Identification and analysis of the interaction between Edc3 and Dcp2 in Saccharomyces cerevisiae. Mol. Cell. Biol. 30:1446-1456.
-
(2010)
Mol. Cell. Biol.
, vol.30
, pp. 1446-1456
-
-
Harigaya, Y.1
Jones, B.N.2
Muhlrad, D.3
Gross, J.D.4
Parker, R.5
-
27
-
-
80155192450
-
Lateral release of proteins from the TOM complex into the outer membrane of mitochondria
-
Harner M, Neupert W, Deponte M. 2011. Lateral release of proteins from the TOM complex into the outer membrane of mitochondria. EMBO J. 30:3232-3241.
-
(2011)
EMBO J
, vol.30
, pp. 3232-3241
-
-
Harner, M.1
Neupert, W.2
Deponte, M.3
-
28
-
-
63449085311
-
Computationally driven, quantitative experiments discover genes required for mitochondrial biogenesis
-
Hess DC, et al. 2009. Computationally driven, quantitative experiments discover genes required for mitochondrial biogenesis. PLoS Genet. 5:e1000407.
-
(2009)
PLoS Genet
, vol.5
-
-
Hess, D.C.1
-
29
-
-
54949148332
-
Diverse RNA-binding proteins interact with functionally related sets of RNAs, suggesting an extensive regulatory system
-
Hogan DJ, Riordan DP, Gerber AP, Herschlag D, Brown PO. 2008. Diverse RNA-binding proteins interact with functionally related sets of RNAs, suggesting an extensive regulatory system. PLoS Biol. 6:e255.
-
(2008)
PLoS Biol
, vol.6
-
-
Hogan, D.J.1
Riordan, D.P.2
Gerber, A.P.3
Herschlag, D.4
Brown, P.O.5
-
30
-
-
79954590105
-
Nuclear mRNA quality control in yeast is mediated by Nrd1 co-transcriptional recruitment, as revealed by the targeting of Rhoinduced aberrant transcripts
-
Honorine R, Mosrin-Huaman C, Hervouet-Coste N, Libri D, Rahmouni AR. 2011. Nuclear mRNA quality control in yeast is mediated by Nrd1 co-transcriptional recruitment, as revealed by the targeting of Rhoinduced aberrant transcripts. Nucleic Acids Res. 39:2809-2820.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 2809-2820
-
-
Honorine, R.1
Mosrin-Huaman, C.2
Hervouet-Coste, N.3
Libri, D.4
Rahmouni, A.R.5
-
31
-
-
80155186698
-
A mitochondrial-focused genetic interaction map reveals a scaffold-like complex required for inner membrane organization in mitochondria
-
Hoppins S, et al. 2011. A mitochondrial-focused genetic interaction map reveals a scaffold-like complex required for inner membrane organization in mitochondria. J. Cell Biol. 195:323-340.
-
(2011)
J. Cell Biol.
, vol.195
, pp. 323-340
-
-
Hoppins, S.1
-
32
-
-
37149034478
-
Trf4 targets ncRNAs from telomeric and rDNA spacer regions and functions in rDNA copy number control
-
Houseley J, Kotovic K, El Hage A, Tollervey D. 2007. Trf4 targets ncRNAs from telomeric and rDNA spacer regions and functions in rDNA copy number control. EMBO J. 26:4996-5006.
-
(2007)
EMBO J
, vol.26
, pp. 4996-5006
-
-
Houseley, J.1
Kotovic, K.2
El Hage, A.3
Tollervey, D.4
-
34
-
-
0037205450
-
The C-terminal domain of the largest subunit of RNA polymerase II is required for stationary phase entry and functionally interacts with the Ras/ PKA signaling pathway
-
Howard SC, Budovskaya YV, Chang YW, Herman PK. 2002. The C-terminal domain of the largest subunit of RNA polymerase II is required for stationary phase entry and functionally interacts with the Ras/ PKA signaling pathway. J. Biol. Chem. 277:19488-19497.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 19488-19497
-
-
Howard, S.C.1
Budovskaya, Y.V.2
Chang, Y.W.3
Herman, P.K.4
-
35
-
-
0345730820
-
The Ras/PKA signaling pathway may control RNA polymerase II elongation via the Spt4p/Spt5p complex in Saccharomyces cerevisiae
-
Howard SC, Hester A, Herman PK. 2003. The Ras/PKA signaling pathway may control RNA polymerase II elongation via the Spt4p/Spt5p complex in Saccharomyces cerevisiae. Genetics 165:1059-1070.
-
(2003)
Genetics
, vol.165
, pp. 1059-1070
-
-
Howard, S.C.1
Hester, A.2
Herman, P.K.3
-
36
-
-
0142184341
-
Global analysis of protein localization in budding yeast
-
Huh WK, et al. 2003. Global analysis of protein localization in budding yeast. Nature 425:686-691.
-
(2003)
Nature
, vol.425
, pp. 686-691
-
-
Huh, W.K.1
-
37
-
-
80054724192
-
Yeast Nrd1, Nab3, and Sen1 transcriptome-wide binding maps suggest multiple roles in post-transcriptional RNA processing
-
Jamonnak N, et al. 2011. Yeast Nrd1, Nab3, and Sen1 transcriptome-wide binding maps suggest multiple roles in post-transcriptional RNA processing. RNA 17:2011-2025.
-
(2011)
RNA
, vol.17
, pp. 2011-2025
-
-
Jamonnak, N.1
-
38
-
-
44949166705
-
Properties of an intergenic terminator and start site switch that regulate IMD2 transcription in yeast
-
Jenks MH, O'Rourke TW, Reines D. 2008. Properties of an intergenic terminator and start site switch that regulate IMD2 transcription in yeast. Mol. Cell. Biol. 28:3883-3893.
-
(2008)
Mol. Cell. Biol.
, vol.28
, pp. 3883-3893
-
-
Jenks, M.H.1
O'Rourke, T.W.2
Reines, D.3
-
39
-
-
77957786100
-
Gene-specific RNA polymerase II phosphorylation and the CTD code
-
Kim H, et al. 2010. Gene-specific RNA polymerase II phosphorylation and the CTD code. Nat. Struct. Mol. Biol. 17:1279-1286.
-
(2010)
Nat. Struct. Mol. Biol.
, vol.17
, pp. 1279-1286
-
-
Kim, H.1
-
40
-
-
79952295561
-
Mpk1 MAPK association with the Paf1 complex blocks Sen1-mediated premature transcription termination
-
Kim KY, Levin DE. 2011. Mpk1 MAPK association with the Paf1 complex blocks Sen1-mediated premature transcription termination. Cell 144: 745-756.
-
(2011)
Cell
, vol.144
, pp. 745-756
-
-
Kim, K.Y.1
Levin, D.E.2
-
41
-
-
34147208065
-
Metabolic regulation of IMD2 transcription and an unusual DNA element that generates short transcripts
-
Kopcewicz KA, O'Rourke TW, Reines D. 2007. Metabolic regulation of IMD2 transcription and an unusual DNA element that generates short transcripts. Mol. Cell. Biol. 27:2821-2829.
-
(2007)
Mol. Cell. Biol.
, vol.27
, pp. 2821-2829
-
-
Kopcewicz, K.A.1
O'Rourke, T.W.2
Reines, D.3
-
42
-
-
31544449684
-
A screen for nigericin-resistant yeast mutants revealed genes controlling mitochondrial volume and mitochondrial cation homeostasis
-
Kucejova B, Kucej M, Petrezselyova S, Abelovska L, Tomaska L. 2005. A screen for nigericin-resistant yeast mutants revealed genes controlling mitochondrial volume and mitochondrial cation homeostasis. Genetics 171:517-526.
-
(2005)
Genetics
, vol.171
, pp. 517-526
-
-
Kucejova, B.1
Kucej, M.2
Petrezselyova, S.3
Abelovska, L.4
Tomaska, L.5
-
43
-
-
47349099971
-
Regulation of a eukaryotic gene by GTPdependent start site selection and transcription attenuation
-
Kuehner JN, Brow DA. 2008. Regulation of a eukaryotic gene by GTPdependent start site selection and transcription attenuation. Mol. Cell 31:201-211.
-
(2008)
Mol. Cell
, vol.31
, pp. 201-211
-
-
Kuehner, J.N.1
Brow, D.A.2
-
44
-
-
79955475464
-
Unravelling the means to an end: RNA polymerase II transcription termination
-
Kuehner JN, Pearson EL, Moore C. 2011. Unravelling the means to an end: RNA polymerase II transcription termination. Nat. Rev. Mol. Cell Biol. 12:283-294.
-
(2011)
Nat. Rev. Mol. Cell Biol.
, vol.12
, pp. 283-294
-
-
Kuehner, J.N.1
Pearson, E.L.2
Moore, C.3
-
45
-
-
33947584417
-
Large-scale phosphorylation analysis of alpha-factorarrested Saccharomyces cerevisiae
-
Li X, et al. 2007. Large-scale phosphorylation analysis of alpha-factorarrested Saccharomyces cerevisiae. J. Proteome Res. 6:1190-1197.
-
(2007)
J. Proteome Res.
, vol.6
, pp. 1190-1197
-
-
Li, X.1
-
46
-
-
0030868697
-
Xbp1, a stress-induced transcriptional repressor of the Saccharomyces cerevisiae Swi4/Mbp1 family
-
Mai B, Breeden L. 1997. Xbp1, a stress-induced transcriptional repressor of the Saccharomyces cerevisiae Swi4/Mbp1 family. Mol. Cell. Biol. 17: 6491-6501.
-
(1997)
Mol. Cell. Biol.
, vol.17
, pp. 6491-6501
-
-
Mai, B.1
Breeden, L.2
-
47
-
-
33645460198
-
Identification of target genes of a yeast transcriptional repressor
-
Mai B, Breeden LL. 2006. Identification of target genes of a yeast transcriptional repressor. Methods Mol. Biol. 317:267-277.
-
(2006)
Methods Mol. Biol.
, vol.317
, pp. 267-277
-
-
Mai, B.1
Breeden, L.L.2
-
48
-
-
9444282110
-
Genomic analysis of stationary-phase and exit in Saccharomyces cerevisiae: gene expression and identification of novel essential genes
-
Martinez MJ, et al. 2004. Genomic analysis of stationary-phase and exit in Saccharomyces cerevisiae: gene expression and identification of novel essential genes. Mol. Biol. Cell 15:5295-5305.
-
(2004)
Mol. Biol. Cell
, vol.15
, pp. 5295-5305
-
-
Martinez, M.J.1
-
49
-
-
77957766550
-
Uniform transitions of the general RNA polymerase II transcription complex
-
Mayer A, et al. 2010. Uniform transitions of the general RNA polymerase II transcription complex. Nat. Struct. Mol. Biol. 17:1272-1278.
-
(2010)
Nat. Struct. Mol. Biol.
, vol.17
, pp. 1272-1278
-
-
Mayer, A.1
-
50
-
-
0024293556
-
The WHI1+ gene of Saccharomyces cerevisiae tethers cell division to cell size and is a cyclin homolog
-
Nash R, Tokiwa G, Anand S, Erickson K, Futcher AB. 1988. The WHI1+ gene of Saccharomyces cerevisiae tethers cell division to cell size and is a cyclin homolog. EMBO J. 7:4335-4346.
-
(1988)
EMBO J
, vol.7
, pp. 4335-4346
-
-
Nash, R.1
Tokiwa, G.2
Anand, S.3
Erickson, K.4
Futcher, A.B.5
-
51
-
-
60549114880
-
Widespread bidirectional promoters are the major source of cryptic transcripts in yeast
-
Neil H, et al. 2009. Widespread bidirectional promoters are the major source of cryptic transcripts in yeast. Nature 457:1038-1042.
-
(2009)
Nature
, vol.457
, pp. 1038-1042
-
-
Neil, H.1
-
52
-
-
0023427567
-
Cloning and characterization of the low-affinity cyclic AMP phosphodiesterase gene of Saccharomyces cerevisiae
-
Nikawa J, Sass P, Wigler M. 1987. Cloning and characterization of the low-affinity cyclic AMP phosphodiesterase gene of Saccharomyces cerevisiae. Mol. Cell. Biol. 7:3629-3636.
-
(1987)
Mol. Cell. Biol.
, vol.7
, pp. 3629-3636
-
-
Nikawa, J.1
Sass, P.2
Wigler, M.3
-
53
-
-
57749199748
-
Analyzing P-bodies in Saccharomyces cerevisiae
-
Nissan T, Parker R. 2008. Analyzing P-bodies in Saccharomyces cerevisiae. Methods Enzymol. 448:507-520.
-
(2008)
Methods Enzymol
, vol.448
, pp. 507-520
-
-
Nissan, T.1
Parker, R.2
-
54
-
-
33845657458
-
dSLAM analysis of genome-wide genetic interactions in Saccharomyces cerevisiae
-
Pan X, et al. 2007. dSLAM analysis of genome-wide genetic interactions in Saccharomyces cerevisiae. Methods 41:206-221.
-
(2007)
Methods
, vol.41
, pp. 206-221
-
-
Pan, X.1
-
55
-
-
8644224853
-
A robust toolkit for functional profiling of the yeast genome
-
Pan X, et al. 2004. A robust toolkit for functional profiling of the yeast genome. Mol. Cell 16:487-496.
-
(2004)
Mol. Cell
, vol.16
, pp. 487-496
-
-
Pan, X.1
-
56
-
-
0031720922
-
Transcriptional regulation of CLN3 expression by glucose in Saccharomyces cerevisiae
-
Parviz F, Hall DD, Markwardt DD, Heideman W. 1998. Transcriptional regulation of CLN3 expression by glucose in Saccharomyces cerevisiae. J. Bacteriol. 180:4508-4515.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 4508-4515
-
-
Parviz, F.1
Hall, D.D.2
Markwardt, D.D.3
Heideman, W.4
-
57
-
-
0032548846
-
Growth-related changes in phosphorylation of yeast RNA polymerase II
-
Patturajan M, et al. 1998. Growth-related changes in phosphorylation of yeast RNA polymerase II. J. Biol. Chem. 273:4689-4694.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 4689-4694
-
-
Patturajan, M.1
-
58
-
-
44349194970
-
Identification of genes that function in the biogenesis and localization of small nucleolar RNAs in Saccharomyces cerevisiae
-
Qiu H, et al. 2008. Identification of genes that function in the biogenesis and localization of small nucleolar RNAs in Saccharomyces cerevisiae. Mol. Cell. Biol. 28:3686-3699.
-
(2008)
Mol. Cell. Biol.
, vol.28
, pp. 3686-3699
-
-
Qiu, H.1
-
59
-
-
77956192942
-
Connecting mutations of the RNA polymerase II C-terminal domain to complex phenotypic changes using combined gene expression and network analyses
-
Rogers C, Guo Z, Stiller JW. 2010. Connecting mutations of the RNA polymerase II C-terminal domain to complex phenotypic changes using combined gene expression and network analyses. PLoS One 5:e11386.
-
(2010)
PLoS One
, vol.5
-
-
Rogers, C.1
Guo, Z.2
Stiller, J.W.3
-
60
-
-
70349779344
-
Fail-safe transcriptional termination for protein-coding genes in S. cerevisiae
-
Rondon AG, Mischo HE, Kawauchi J, Proudfoot NJ. 2009. Fail-safe transcriptional termination for protein-coding genes in S. cerevisiae. Mol. Cell 36:88-98.
-
(2009)
Mol. Cell
, vol.36
, pp. 88-98
-
-
Rondon, A.G.1
Mischo, H.E.2
Kawauchi, J.3
Proudfoot, N.J.4
-
61
-
-
0022859343
-
Cloning and characterization of the high-affinity cAMP phosphodiesterase of Saccharomyces cerevisiae
-
Sass P, Field J, Nikawa J, Toda T, Wigler M. 1986. Cloning and characterization of the high-affinity cAMP phosphodiesterase of Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. U. S. A. 83:9303-9307.
-
(1986)
Proc. Natl. Acad. Sci. U. S. A.
, vol.83
, pp. 9303-9307
-
-
Sass, P.1
Field, J.2
Nikawa, J.3
Toda, T.4
Wigler, M.5
-
62
-
-
0033434003
-
The E-box DNA binding protein Sgc1p suppresses the gcr2 mutation, which is involved in transcriptional activation of glycolytic genes in Saccharomyces cerevisiae
-
Sato T, et al. 1999. The E-box DNA binding protein Sgc1p suppresses the gcr2 mutation, which is involved in transcriptional activation of glycolytic genes in Saccharomyces cerevisiae. FEBS Lett. 463:307-311.
-
(1999)
FEBS Lett
, vol.463
, pp. 307-311
-
-
Sato, T.1
-
63
-
-
11144267737
-
Improved monomeric red, orange and yellow fluorescent proteins derived from Discosoma sp. red fluorescent protein
-
Shaner NC, et al. 2004. Improved monomeric red, orange and yellow fluorescent proteins derived from Discosoma sp. red fluorescent protein. Nat. Biotechnol. 22:1567-1572.
-
(2004)
Nat. Biotechnol.
, vol.22
, pp. 1567-1572
-
-
Shaner, N.C.1
-
66
-
-
0029960432
-
Repression of gene expression by an exogenous sequence element acting in concert with a heterogeneous nuclear ribonucleoprotein-like protein, Nrd1, and the putative helicase Sen1
-
Steinmetz EJ, Brow DA. 1996. Repression of gene expression by an exogenous sequence element acting in concert with a heterogeneous nuclear ribonucleoprotein-like protein, Nrd1, and the putative helicase Sen1. Mol. Cell. Biol. 16:6993-7003.
-
(1996)
Mol. Cell. Biol.
, vol.16
, pp. 6993-7003
-
-
Steinmetz, E.J.1
Brow, D.A.2
-
67
-
-
0035921929
-
RNA-binding protein Nrd1 directs poly(A)-independent 3'-end formation of RNA polymerase II transcripts
-
Steinmetz EJ, Conrad NK, Brow DA, Corden JL. 2001. RNA-binding protein Nrd1 directs poly(A)-independent 3'-end formation of RNA polymerase II transcripts. Nature 413:327-331.
-
(2001)
Nature
, vol.413
, pp. 327-331
-
-
Steinmetz, E.J.1
Conrad, N.K.2
Brow, D.A.3
Corden, J.L.4
-
68
-
-
33645226793
-
cis- and trans-acting determinants of transcription termination by yeast RNA polymerase II
-
Steinmetz EJ, Ng SB, Cloute JP, Brow DA. 2006. cis- and trans-acting determinants of transcription termination by yeast RNA polymerase II. Mol. Cell. Biol. 26:2688-2696.
-
(2006)
Mol. Cell. Biol.
, vol.26
, pp. 2688-2696
-
-
Steinmetz, E.J.1
Ng, S.B.2
Cloute, J.P.3
Brow, D.A.4
-
69
-
-
33751504083
-
Genome-wide distribution of yeast RNA polymerase II and its control by Sen1 helicase
-
Steinmetz EJ, et al. 2006. Genome-wide distribution of yeast RNA polymerase II and its control by Sen1 helicase. Mol. Cell 24:735-746.
-
(2006)
Mol. Cell
, vol.24
, pp. 735-746
-
-
Steinmetz, E.J.1
-
70
-
-
0028858117
-
Dosage suppressors of the dominant G1 cyclin mutant CLN3-2: identification of a yeast gene encoding a putative RNA/ssDNA binding protein
-
Sugimoto K, Matsumoto K, Kornberg RD, Reed SI, Wittenberg C. 1995. Dosage suppressors of the dominant G1 cyclin mutant CLN3-2: identification of a yeast gene encoding a putative RNA/ssDNA binding protein. Mol. Gen. Genet. 248:712-718.
-
(1995)
Mol. Gen. Genet.
, vol.248
, pp. 712-718
-
-
Sugimoto, K.1
Matsumoto, K.2
Kornberg, R.D.3
Reed, S.I.4
Wittenberg, C.5
-
71
-
-
0024497239
-
IRA1, an inhibitory regulator of the RAS-cyclicAMPpathway in Saccharomyces cerevisiae
-
Tanaka K, Matsumoto K, Toh EA. 1989. IRA1, an inhibitory regulator of the RAS-cyclicAMPpathway in Saccharomyces cerevisiae. Mol. Cell. Biol. 9:757-768.
-
(1989)
Mol. Cell. Biol.
, vol.9
, pp. 757-768
-
-
Tanaka, K.1
Matsumoto, K.2
Toh, E.A.3
-
72
-
-
0025232840
-
S. cerevisiae genes IRA1 and IRA2 encode proteins that may be functionally equivalent to mammalian ras GTPase activating protein
-
Tanaka K, et al. 1990. S. cerevisiae genes IRA1 and IRA2 encode proteins that may be functionally equivalent to mammalian ras GTPase activating protein. Cell 60:803-807.
-
(1990)
Cell
, vol.60
, pp. 803-807
-
-
Tanaka, K.1
-
73
-
-
50249183162
-
Futile cycle of transcription initiation and termination modulates the response to nucleotide shortage in S. cerevisiae
-
Thiebaut M, et al. 2008. Futile cycle of transcription initiation and termination modulates the response to nucleotide shortage in S. cerevisiae. Mol. Cell 31:671-682.
-
(2008)
Mol. Cell
, vol.31
, pp. 671-682
-
-
Thiebaut, M.1
-
74
-
-
33748435751
-
Transcription termination and nuclear degradation of cryptic unstable transcripts: a role for the nrd1-nab3 pathway in genome surveillance
-
Thiebaut M, Kisseleva-Romanova E, Rougemaille M, Boulay J, Libri D. 2006. Transcription termination and nuclear degradation of cryptic unstable transcripts: a role for the nrd1-nab3 pathway in genome surveillance. Mol. Cell 23:853-864.
-
(2006)
Mol. Cell
, vol.23
, pp. 853-864
-
-
Thiebaut, M.1
Kisseleva-Romanova, E.2
Rougemaille, M.3
Boulay, J.4
Libri, D.5
-
76
-
-
0028043185
-
Inhibition of G1 cyclin activity by the Ras/cAMP pathway in yeast
-
Tokiwa G, Tyers M, Volpe T, Futcher B. 1994. Inhibition of G1 cyclin activity by the Ras/cAMP pathway in yeast. Nature 371:342-345.
-
(1994)
Nature
, vol.371
, pp. 342-345
-
-
Tokiwa, G.1
Tyers, M.2
Volpe, T.3
Futcher, B.4
-
77
-
-
30744467674
-
Nrd1 interacts with the nuclear exosome for 3' processing of RNA polymerase II transcripts
-
Vasiljeva L, Buratowski S. 2006. Nrd1 interacts with the nuclear exosome for 3' processing of RNA polymerase II transcripts. Mol. Cell 21:239-248.
-
(2006)
Mol. Cell
, vol.21
, pp. 239-248
-
-
Vasiljeva, L.1
Buratowski, S.2
-
78
-
-
49449110180
-
The Nrd1-Nab3-Sen1 termination complex interacts with the Ser5-phosphorylated RNA polymerase II C-terminal domain
-
Vasiljeva L, Kim M, Mutschler H, Buratowski S, Meinhart A. 2008. The Nrd1-Nab3-Sen1 termination complex interacts with the Ser5-phosphorylated RNA polymerase II C-terminal domain. Nat. Struct. Mol. Biol. 15:795-804.
-
(2008)
Nat. Struct. Mol. Biol.
, vol.15
, pp. 795-804
-
-
Vasiljeva, L.1
Kim, M.2
Mutschler, H.3
Buratowski, S.4
Meinhart, A.5
-
79
-
-
0035477838
-
Box C/D small nucleolar RNA trafficking involves small nucleolar RNP proteins, nucleolar factors and a novel nuclear domain
-
Verheggen C, et al. 2001. Box C/D small nucleolar RNA trafficking involves small nucleolar RNP proteins, nucleolar factors and a novel nuclear domain. EMBO J. 20:5480-5490.
-
(2001)
EMBO J
, vol.20
, pp. 5480-5490
-
-
Verheggen, C.1
-
80
-
-
34447543117
-
High-level production of beta-carotene in Saccharomyces cerevisiae by successive transformation with carotenogenic genes from Xanthophyllomyces dendrorhous
-
Verwaal R, et al. 2007. High-level production of beta-carotene in Saccharomyces cerevisiae by successive transformation with carotenogenic genes from Xanthophyllomyces dendrorhous. Appl. Environ. Microbiol. 73: 4342-4350.
-
(2007)
Appl. Environ. Microbiol.
, vol.73
, pp. 4342-4350
-
-
Verwaal, R.1
-
81
-
-
80054718239
-
Dual role of mitofilin in mitochondrial membrane organization and protein biogenesis
-
von der Malsburg K, et al. 2011. Dual role of mitofilin in mitochondrial membrane organization and protein biogenesis. Dev. Cell 21:694-707.
-
(2011)
Dev. Cell
, vol.21
, pp. 694-707
-
-
von der Malsburg, K.1
-
82
-
-
0033229970
-
The economics of ribosome biosynthesis in yeast
-
Warner JR. 1999. The economics of ribosome biosynthesis in yeast. Trends Biochem. Sci. 24:437-440.
-
(1999)
Trends Biochem. Sci.
, vol.24
, pp. 437-440
-
-
Warner, J.R.1
-
83
-
-
79955587252
-
The nuclear RNA polymerase II surveillance system targets polymerase III transcripts
-
Wlotzka W, Kudla G, Granneman S, Tollervey D. 2011. The nuclear RNA polymerase II surveillance system targets polymerase III transcripts. EMBO J. 30:1790-1803.
-
(2011)
EMBO J
, vol.30
, pp. 1790-1803
-
-
Wlotzka, W.1
Kudla, G.2
Granneman, S.3
Tollervey, D.4
-
84
-
-
80052735880
-
Discovery of a small molecule targeting IRA2 deletion in budding yeast and neurofibromin loss in malignant peripheral nerve sheath tumor cells
-
Wood M, et al. 2011. Discovery of a small molecule targeting IRA2 deletion in budding yeast and neurofibromin loss in malignant peripheral nerve sheath tumor cells. Mol. Cancer Ther. 10:1740-1750.
-
(2011)
Mol. Cancer Ther.
, vol.10
, pp. 1740-1750
-
-
Wood, M.1
-
85
-
-
20444368036
-
Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase
-
Wyers F, et al. 2005. Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase. Cell 121: 725-737.
-
(2005)
Cell
, vol.121
, pp. 725-737
-
-
Wyers, F.1
-
86
-
-
60549108380
-
Bidirectional promoters generate pervasive transcription in yeast
-
Xu Z, et al. 2009. Bidirectional promoters generate pervasive transcription in yeast. Nature 457:1033-1037.
-
(2009)
Nature
, vol.457
, pp. 1033-1037
-
-
Xu, Z.1
-
87
-
-
60749127330
-
Glucose regulates transcription in yeast through a network of signaling pathways
-
Zaman S, Lippman SI, Schneper L, Slonim N, Broach JR. 2009. Glucose regulates transcription in yeast through a network of signaling pathways. Mol. Syst. Biol. 5:245.
-
(2009)
Mol. Syst. Biol.
, vol.5
, pp. 245
-
-
Zaman, S.1
Lippman, S.I.2
Schneper, L.3
Slonim, N.4
Broach, J.R.5
|