-
1
-
-
0037364162
-
ADMET in silico modelling: Towards prediction paradise?
-
DOI 10.1038/nrd1032
-
Van de Waterbeemd H, Gifford E (2003) ADMET in silico modelling: towards prediction paradise? Nat Rev Drug Discov 2:192-204 (Pubitemid 37361664)
-
(2003)
Nature Reviews Drug Discovery
, vol.2
, Issue.3
, pp. 192-204
-
-
Van De Waterbeemd, H.1
Gifford, E.2
-
2
-
-
35548954739
-
Improving early drug discovery through ADME modelling: An overview
-
Wishart DS (2007) Improving Early Drug Discovery through ADME: An Overview. Drugs R&D 8:349-362 (Pubitemid 350014787)
-
(2007)
Drugs in R and D
, vol.8
, Issue.6
, pp. 349-362
-
-
Wishart, D.S.1
-
3
-
-
0015514472
-
The fluid mosaic model of the structure of cell membranes
-
Singer SJ, Nicolson GL (1972) The fluid mosaic model of the structure of cell membranes. Science 175:720-731
-
(1972)
Science
, vol.175
, pp. 720-731
-
-
Singer, S.J.1
Nicolson, G.L.2
-
4
-
-
84958632244
-
Physico-chemical and biological factors that influence a drug's cellular permeability by passive diffusion
-
Conradi RA, Burton PS, Borchardt RT (1996) Physico-chemical and biological factors that influence a drug's cellular permeability by passive diffusion. Methods Princ Med Chem 4:233-252
-
(1996)
Methods Princ Med Chem
, vol.4
, pp. 233-252
-
-
Conradi, R.A.1
Burton, P.S.2
Borchardt, R.T.3
-
5
-
-
0030787532
-
A human colonic cell line sharing similarities with enterocytes as a model to examine oral absorption: Advantages and limitations of the Caco-2 model
-
Delie F, Rubas WA (1997) A human colonic cell line sharing similarities with enterocytes as a model to examine oral absorption: advantages and limitations of the Caco-2 model. Crit Rev Ther Drug Carrier Syst 14:221-286 (Pubitemid 27355917)
-
(1997)
Critical Reviews in Therapeutic Drug Carrier Systems
, vol.14
, Issue.3
, pp. 221-286
-
-
Delie, F.1
Rubas, W.2
-
6
-
-
0035286778
-
Caco-2 monolayers in experimental and theoretical predictions of drug transport
-
Artursson P, Palm K, Luthman K (2001) Caco-2 monolayers in experimental and theoretical predictions of drug transport. Adv Drug Deliv Rev 46:27-43
-
(2001)
Adv Drug Deliv Rev
, vol.46
, pp. 27-43
-
-
Artursson, P.1
Palm, K.2
Luthman, K.3
-
7
-
-
0031024171
-
Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings
-
DOI 10.1016/S0169-409X(96)00423-1, PII S0169409X96004231
-
Lipsinki CA, Lomabardo F, Dominy BW, Feeney PJ (1997) Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings. Adv Drug Deliv Rev 23:3-25 (Pubitemid 27046991)
-
(1997)
Advanced Drug Delivery Reviews
, vol.23
, Issue.1-3
, pp. 3-25
-
-
Lipinski, C.A.1
Lombardo, F.2
Dominy, B.W.3
Feeney, P.J.4
-
8
-
-
0030296370
-
Review of theoretical passive drug absorption models: Historical background, recent developments and limitations
-
DOI 10.1016/S0031-6865(96)00031-3, PII S0031686596000313
-
Camenisch G, Folkers G, van de Waterbeemd H (1996) Review of theoretical passive drug absorption models: historical background, recent developments and limitations. Pharm Acta Helv 71:309-327 (Pubitemid 26402757)
-
(1996)
Pharmaceutica Acta Helvetiae
, vol.71
, Issue.5
, pp. 309-327
-
-
Camenisch, G.1
Folkers, G.2
Van De Waterbeemd, H.3
-
9
-
-
0000312699
-
Physicochemical and drug-delivery considerations for oral drug bioavailability
-
DOI 10.1016/1359-6446(96)10039-8
-
Chan O, Stewart BH (1996) Physicochemical and drug-delivery consideration for oral drug bioavailability. Drug Discov Today 1:461-473 (Pubitemid 126393548)
-
(1996)
Drug Discovery Today
, vol.1
, Issue.11
, pp. 461-473
-
-
Chan, O.H.1
Stewart, B.H.2
-
10
-
-
0030914681
-
Polar molecular surface properties predict the intestinal absorption of drugs in humans
-
DOI 10.1023/A:1012188625088
-
Palm K, Stenberg P, Luthman K, Artursson P (1997) Polar molecular surface properties predict the intestinal absorption of drugs in humans. Pharm Res 14:568-571 (Pubitemid 27220272)
-
(1997)
Pharmaceutical Research
, vol.14
, Issue.5
, pp. 568-571
-
-
Palm, K.1
Stenberg, P.2
Luthman, K.3
Artursson, P.4
-
11
-
-
0032189375
-
Estimation of permeability by passive diffusion through Caco-2 cell monolayers using the drugs' lipophilicity and molecular weight
-
DOI 10.1016/S0928-0987(97)10019-7, PII S0928098797100197
-
Camenisch G, Alsenz J, van de Waterbeemd H, Folkers G (1998) Estimation of permeability by passive diffusion through Caco-2 cell monolayers using drugs' lipophilicity and molecular weight. Eur J Pharm Sci 6:313-319 (Pubitemid 28468539)
-
(1998)
European Journal of Pharmaceutical Sciences
, vol.6
, Issue.4
, pp. 313-319
-
-
Camenisch, G.1
Alsenz, J.2
Van De Waterbeemd, H.3
Folkers, G.4
-
12
-
-
3042720009
-
Total and local quadratic indices of the "molecular pseudograph's atom adjacency matrix". Application to prediction of Caco-2 permeability of drugs
-
Ponce YM, Cabrera Pérez MA, Zaldivar VR, Ofori E, Montero LA (2003) Total and local quadratic indices of the "molecular pseudograph's atom adjacency matrix". application to prediction of caco-2 premeability of drugs. Int J Mol Sci 4:512-536 (Pubitemid 38870293)
-
(2003)
International Journal of Molecular Sciences
, vol.4
, Issue.8-9
, pp. 512-536
-
-
Ponce, Y.M.1
Cabrera Perez, M.A.2
Zaldivar, V.R.3
Ofori, E.4
Montero, L.A.5
-
13
-
-
34247397960
-
Prediction and mechanistic interpretation of human oral drug absorption using MI-QSAR analysis
-
DOI 10.1021/mp0600900
-
Iyer M, Tseng YJ, Senese CL, Liu J, Hopfinger AJ (2007) Prediction and mechanistic interpretation of human oral drug absorption using MI-QSAR analysis. Mol Pharm 4:218-231 (Pubitemid 46640598)
-
(2007)
Molecular Pharmaceutics
, vol.4
, Issue.2
, pp. 218-231
-
-
Iyer, M.1
Tseng, Y.J.2
Senese, C.L.3
Liu, J.4
Hopfinger, A.J.5
-
14
-
-
0037177509
-
Prediction of Caco-2 cell permeability using a combination of MO-calculation and neural network
-
DOI 10.1016/S0378-5173(02)00045-5, PII S0378517302000455
-
Fujiwara SI, Yamashita F, Hashida M (2002) Prediction of caco-2 cell permeability using a combination of mo-calculation and neural networks. Int J Pharm 237:95-105 (Pubitemid 34310483)
-
(2002)
International Journal of Pharmaceutics
, vol.237
, Issue.1-2
, pp. 95-105
-
-
Fujiwara, S.-I.1
Yamashita, F.2
Hashida, M.3
-
15
-
-
0031404654
-
Theoretical calculation and prediction of Caco-2 cell permeability using MolSurf parametrization and PLS statistics
-
DOI 10.1023/A:1012196216736
-
Norinder U, Osterber T, Artursson P (1997) Theoretical calculation and prediction of caco-2 cell permeability using molsurf parametrization and pls statistics. Pharm Res 14:1786-1791 (Pubitemid 28062926)
-
(1997)
Pharmaceutical Research
, vol.14
, Issue.12
, pp. 1786-1791
-
-
Norinder, U.1
Osterberg, T.2
Artursson, P.3
-
16
-
-
0034625096
-
Molecular fields in quantitative structure-permeation relationships: The volsurf approach
-
Cruciani G, Crivori P, Carrupt PA, Testa B (2000) Molecular fields in quantitative structure-permeation relationships: the volsurf approach. J Mol Struct THEOCHEM 503:17-30
-
(2000)
J Mol Struct THEOCHEM
, vol.503
, pp. 17-30
-
-
Cruciani, G.1
Crivori, P.2
Carrupt, P.A.3
Testa, B.4
-
17
-
-
0036489453
-
Predicting Caco-2 cell permeation coefficients of organic molecules using membrane-interaction QSAR analysis
-
DOI 10.1021/ci010108d
-
Kulkarni A, Han Y, Hopfinger AJ (2002) Predicting Caco-2 cell permeation coefficients of organic molecules using membraneinteraction QSAR analysis. J Chem Inf Comput Sci 42:331-342 (Pubitemid 35355308)
-
(2002)
Journal of Chemical Information and Computer Sciences
, vol.42
, Issue.2
, pp. 331-342
-
-
Kulkarni, A.1
Han, Y.2
Hopfinger, A.J.3
-
18
-
-
0034066050
-
Evaluation of an accelerated Caco-2 cell permeability model
-
DOI 10.1002/(SICI)1520-6017(200003)89:3<336::AID-JPS5>3.0.CO;2-M
-
Liang E, Chessic K, Yazdanian M (2000) Evaluation of an accelerated Caco-2 cell permeability model. J Pharm Sci 89:336-345 (Pubitemid 30152434)
-
(2000)
Journal of Pharmaceutical Sciences
, vol.89
, Issue.3
, pp. 336-345
-
-
Liang, E.1
Chessic, K.2
Yazdanian, M.3
-
19
-
-
8844224326
-
A new topological descriptors based model for predicting intestinal epithelial transport of drugs in caco-2 cell culture
-
Ponce YM, Perez MAC, Zaldivar VR, Diaz HG, Torrens F (2004) A new topological descriptors based model for predicting intestinal epithelial transport of drugs in Caco-2 cell culture. J Pharm Sci 7:186-199 (Pubitemid 41528891)
-
(2004)
Journal of Pharmacy and Pharmaceutical Sciences
, vol.7
, Issue.2
, pp. 186-199
-
-
Marrero Ponce, Y.1
Cabrera Perez, M.A.2
Romero Zaldivar, V.3
Gonzalez Diaz, H.4
Torrens, F.5
-
20
-
-
0036238280
-
A comparative study of artificial membrane permeability assay for high throughput profiling of drug absorption potential
-
DOI 10.1016/S0223-5234(02)01360-0, PII S0223523402013600
-
Zhu C, Jiang L, Chen TM, Hwang KK (2002) A comparative study of artificial membrane permeability assay for high throughput profiling of drug absorption potential. Eur J Med Chem 37:399-407 (Pubitemid 34465549)
-
(2002)
European Journal of Medicinal Chemistry
, vol.37
, Issue.5
, pp. 399-407
-
-
Zhu, C.1
Jiang, L.2
Chen, T.-M.3
Hwang, K.-K.4
-
21
-
-
0030990079
-
In vitro permeability across Caco-2 cells (colonic) can predict in vivo (small intestinal) absorption in man - Fact or myth
-
DOI 10.1023/A:1012102522787
-
Yee S (1997) In vitro permeability across Caco-2 cells (colonic) can predict in vivo (small intestinal) absorption in man-fact or myth. Pharm Res 14:763-766 (Pubitemid 27281671)
-
(1997)
Pharmaceutical Research
, vol.14
, Issue.6
, pp. 763-766
-
-
Yee, S.1
-
22
-
-
0031742986
-
Link between drug absorption solubility and permeability measurements in Caco-2 cells
-
Pade V, Stavchansky S (1998) Link between drug absorption solubility and permeability measurements in Caco-2 cells. J Pharm Sci 87:1604-1607
-
(1998)
J Pharm Sci
, vol.87
, pp. 1604-1607
-
-
Pade, V.1
Stavchansky, S.2
-
23
-
-
0031781430
-
Correlating partitioning and Caco-2 cell permeability of structurally diverse small molecular weight compounds
-
DOI 10.1023/A:1011930411574
-
Yazdanian M, Glynn SL, Wright JL, Hawi A (1998) Correlating partitioning and caco-2 cell permeability of structurally diverse small molecular weight compounds. Pharm Res 15:1490-1494 (Pubitemid 28427942)
-
(1998)
Pharmaceutical Research
, vol.15
, Issue.9
, pp. 1490-1494
-
-
Yazdanian, M.1
Glynn, S.L.2
Wright, J.L.3
Hawi, A.4
-
24
-
-
84861335959
-
-
Tripos Inc., St Louis, MO, 63144-2913, USA
-
SYBYL Molecular Modeling System, version 7.1, Tripos Inc., St. Louis, MO, 63144-2913, USA
-
SYBYL Molecular Modeling System, Version 7.1
-
-
-
25
-
-
0003258282
-
-
Hypercube Inc, Waterloo, Ontario Canada N2L 3X2
-
HYPERCHEM, version 4.5, Hypercube Inc, Waterloo, Ontario Canada N2L 3X2
-
HYPERCHEM, Version 4.5
-
-
-
26
-
-
0011745370
-
Molecular dynamics simulation of a bilayer membrane
-
Van der Ploeg P, Berendsen HJC (1982) Molecular dynamics simulation of a bilayer membrane. J Chem Phys 76:3271-3276
-
(1982)
J Chem Phys
, vol.76
, pp. 3271-3276
-
-
Van Der Ploeg, P.1
Berendsen, H.J.C.2
-
27
-
-
84861328908
-
-
The Chem21 Group Inc, 1780 Wilson Drive, IL, 60045, USA
-
MI-QSAR, Version 1.0, The Chem21 Group Inc, 1780 Wilson Drive, IL, 60045, USA
-
MI-QSAR, Version 1.0
-
-
-
28
-
-
0032837628
-
Membrane-interaction QSAR analysis: Application to the estimation of eye irritation by organic compounds
-
DOI 10.1023/A:1014853731428
-
Kulkarni AS, Hopfinger AJ (1999) Membrane-interaction QSAR analysis: Application to the estimation of eye irritation by organic compounds. Pharm Res 16:1245-1253 (Pubitemid 29393614)
-
(1999)
Pharmaceutical Research
, vol.16
, Issue.8
, pp. 1245-1253
-
-
Kulkarni, A.S.1
Hopfinger, A.J.2
-
29
-
-
0019882643
-
Preferred conformation and molecular packing of phosphatidylethanolamine and phosphatidylcholine
-
Hauser H, Pascher I, Pearson RH, Sundell S (1981) Preferred conformation and molecular packing of phosphatidylethanolamine and phosphatidylcholine. Biochim Biophys Acta 650:21-51
-
(1981)
Biochim Biophys Acta
, vol.650
, pp. 21-51
-
-
Hauser, H.1
Pascher, I.2
Pearson, R.H.3
Sundell, S.4
-
30
-
-
0035124369
-
Prediction of eye irritation from organic chemicals using membrane-interaction QSAR analysis
-
DOI 10.1093/toxsci/59.2.335
-
Kulkarni A, Hopfinger AJ, Osborne R, Bruner LH, Thompson ED (2001) Prediction of eye irritation from organic chemicals using membrane-interaction QSAR analysis. Toxicol Sci 59:335-345 (Pubitemid 32149565)
-
(2001)
Toxicological Sciences
, vol.59
, Issue.2
, pp. 335-345
-
-
Kulkarni, A.1
Hopfinger, A.J.2
Osborne, R.3
Bruner, L.H.4
Thompson, E.D.5
-
31
-
-
0036844787
-
Predicting blood-brain barrier partitioning of organic molecules using membrane-interaction QSAR analysis
-
DOI 10.1023/A:1020792909928
-
Iyer M, Mishra R, Han Y, Hopfinger AJ (2002) Predicting blood- brain barrier partitioning of organic molecules using membrane- interaction QSAR analysis. Pharm Res 19:1611-1621 (Pubitemid 35305512)
-
(2002)
Pharmaceutical Research
, vol.19
, Issue.11
, pp. 1611-1621
-
-
Iyer, M.1
Mishra, R.2
Han, Y.3
Hopfinger, A.J.4
-
32
-
-
84861328911
-
-
The Chem21 Group Inc, 1780 Wilson Drive, IL, 60045, USA
-
Doherty DC, MOLSIM, Version 3.0, The Chem21 Group Inc, 1780 Wilson Drive, IL, 60045, USA
-
MOLSIM, Version 3.0
-
-
Doherty, D.C.1
-
33
-
-
33750587438
-
Molecular dynamics with coupling to an external bath
-
Berendsen HJC, Postma JPM, van Gunsteren WF, DiNola A, Haak JR (1984) Molecular dynamics with coupling to an external bath. J Chem Phys 81:3684-3690
-
(1984)
J Chem Phys
, vol.81
, pp. 3684-3690
-
-
Berendsen, H.J.C.1
Postma, J.P.M.2
Van Gunsteren, W.F.3
Dinola, A.4
Haak, J.R.5
-
34
-
-
26444541294
-
Predicting permeability coefficient in ADMET evaluation by using different membranes-interaction QSAR
-
DOI 10.1016/j.ijpharm.2005.08.003, PII S0378517305005314
-
Liu J, Li Y, Pan D, Hopfinger AJ (2005) Predicting permeability coefficient in ADMET evaluation by using different membranesinteraction QSAR. Int J Pharm 304:115-123 (Pubitemid 41427655)
-
(2005)
International Journal of Pharmaceutics
, vol.304
, Issue.1-2
, pp. 115-123
-
-
Liu, J.1
Li, Y.2
Pan, D.3
Hopfinger, A.J.4
-
35
-
-
0036212084
-
Prediction of skin irritation from organic chemicals using membrane-interaction QSAR analysis
-
DOI 10.1093/toxsci/66.2.336
-
Kodithala K, Hopfinger AJ, Thompson ED, Robinson MK (2002) Prediction of skin irritation from organic chemicals using membrane-interaction QSAR analysis. Toxicol Sci 66:336-346 (Pubitemid 34285129)
-
(2002)
Toxicological Sciences
, vol.66
, Issue.2
, pp. 336-346
-
-
Kodithala, K.1
Hopfinger, A.J.2
Thompson, E.D.3
Robinson, M.K.4
-
36
-
-
34247397960
-
Prediction and Mechanistic Interpretation of Human Oral Drug Absorption Using MI-QSAR Analysis
-
Iyer M, Tseng YJ, Senese CL, Liu J, Hopfinger AJ (2006) Prediction and Mechanistic Interpretation of Human Oral Drug Absorption Using MI-QSAR Analysis. Mol Pharm 4:218-231
-
(2006)
Mol Pharm
, vol.4
, pp. 218-231
-
-
Iyer, M.1
Tseng, Y.J.2
Senese, C.L.3
Liu, J.4
Hopfinger, A.J.5
-
37
-
-
27944436628
-
A study of the relationship between cornea permeability and eye irritation using membrane-interaction QSAR analysis
-
DOI 10.1093/toxsci/kfi319
-
Li Y, Liu J, Pan D, Hopfinger AJ (2005) A study of the relationship between cornea permeability and eye irritation using membrane-interaction QSAR analysis. Toxicol Sci 88:434-446 (Pubitemid 41672151)
-
(2005)
Toxicological Sciences
, vol.88
, Issue.2
, pp. 434-446
-
-
Li, Y.1
Liu, J.2
Pan, D.3
Hopfinger, A.J.4
-
38
-
-
33846446220
-
Restart procedures for the conjugate gradient method
-
Powell MJD (1977) Restart procedures for the conjugate gradient method. Math Program 12:241-254
-
(1977)
Math Program
, vol.12
, pp. 241-254
-
-
Powell, M.J.D.1
-
39
-
-
0344988823
-
HQSAR a new, highly predictive QSAR technique
-
Lowis DR (1997) HQSAR a new, highly predictive QSAR technique. Tripos Tech Notes 1:1-7
-
(1997)
Tripos Tech Notes
, vol.1
, pp. 1-7
-
-
Lowis, D.R.1
-
40
-
-
0037013438
-
CoMFA and HQSAR of acylhydrazide cruzain inhibitors
-
DOI 10.1016/S0960-894X(02)00189-0, PII S0960894X02001890
-
Rodrigues CR, Flaherty TM, Springer C, McKerrow JH, Cohen FE (2002) CoMFA and HQSAR of acylhydrazide cruzain inhibitors. Bioorg Med Chem Lett 12:1537-1541 (Pubitemid 34521930)
-
(2002)
Bioorganic and Medicinal Chemistry Letters
, vol.12
, Issue.11
, pp. 1537-1541
-
-
Rodrigues, C.R.1
Flaherty, T.M.2
Springer, C.3
McKerrow, J.H.4
Cohen, F.E.5
-
41
-
-
35348864556
-
Hologram QSAR model for the prediction of human oral bioavailability
-
DOI 10.1016/j.bmc.2007.08.060, PII S096808960700764X
-
Moda TL, Montanari CA, Andricopulo AD (2007) Hologram QSAR model for the prediction of human oral bioavailability. Bioorg Med Chem 15:7738-7745 (Pubitemid 47575914)
-
(2007)
Bioorganic and Medicinal Chemistry
, vol.15
, Issue.24
, pp. 7738-7745
-
-
Moda, T.L.1
Montanari, C.A.2
Andricopulo, A.D.3
-
42
-
-
19944374094
-
Hologram quantitative structure-activity relationships for a series of farnesoid X receptor activators
-
DOI 10.1016/j.bmcl.2005.04.017, PII S0960894X05004798
-
Honorio KM, Garratt RC, Andricopulo AD (2005) Hologram quantitative structure-activity relationships for a series of farnesoid X receptor activators. Bioorg Med Chem Lett 15:3119-3125 (Pubitemid 40755207)
-
(2005)
Bioorganic and Medicinal Chemistry Letters
, vol.15
, Issue.12
, pp. 3119-3125
-
-
Honorio, K.M.1
Garratt, R.C.2
Andricopulo, A.D.3
-
43
-
-
33846266156
-
Classical and hologram QSAR studies on a series of tacrine derivatives as butyrylcholinesterase inhibitors
-
DOI 10.2174/157018007779422505
-
Castilho MS, Guido C, Andricopulo AD (2007) Classical and hologram QSAR studies on a series of tacrine derivatives as butyrylcholinesterase inhibitors. Lett Drug Des Discov 4:106-113 (Pubitemid 46121456)
-
(2007)
Letters in Drug Design and Discovery
, vol.4
, Issue.2
, pp. 106-113
-
-
Castilho, M.S.1
Guidob, R.V.C.2
Andricopulob, A.D.3
-
44
-
-
0024532544
-
Pharmacokinetic evaluation in man of terbutaline given as separate enantiomers and as the racemate
-
Borgström L, Nyberg L, Jönsson S, Lindberg C, Paulson J (1989) Pharmacokinetic evaluation in man of terbutaline given as separate enantiomers and as the racemate. Br J Clin Pharmacol 27:49-56 (Pubitemid 19037979)
-
(1989)
British Journal of Clinical Pharmacology
, vol.27
, Issue.1
, pp. 49-56
-
-
Borgstrom, L.1
Nyberg, L.2
Jonsson, S.3
Lindberg, C.4
Paulson, J.5
|