De novo genome project of Cupriavidus basilensis OR16

Journal of Bacteriology

Volumn 194, Issue 8, 2012, Pages 2109-2110

  Cserháti, Mátyás ^a   Kriszt, Balázs ^a   Szoboszlay, Sándor ^a   Tóth, Ákos ^a   Szabó, István ^a   Táncsics, András ^a   Nagy, István ^b,c,d   Horváth, Balázs ^b,c   Kukolya, József ^a  

^a SZENT ISTVÁN UNIVERSITY   (Hungary)

^b Bay Zoltán Nonprofit Ltd BAY BIO   (Hungary)

^c INSTITUTE OF BIOCHEMISTRY   (Hungary)

^d MAX PLANCK INSTITUTE OF BIOCHEMISTRY   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

GLUCOSE DEHYDROGENASE; XENOBIOTIC AGENT;

BACTERIAL GENE; BACTERIAL STRAIN; CUPRIAVIDUS; CUPRIAVIDUS BASILENSIS; GENE SEQUENCE; NONHUMAN; NOTE; PRIORITY JOURNAL; PROTEIN DEGRADATION;

BACTERIAL PROTEINS; BASE SEQUENCE; CUPRIAVIDUS; GENE EXPRESSION REGULATION, BACTERIAL; GENOME, BACTERIAL; GLUCOSE 1-DEHYDROGENASE; MOLECULAR SEQUENCE DATA; SPECIES SPECIFICITY;

CUPRIAVIDUS; CUPRIAVIDUS BASILENSIS;

EID: 84861216358     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.06752-11     Document Type: Note

References (14)

1. Amadou C, et al. 2008. Genome sequence of the beta-rhizobium Cupriavidus taiwanensis and comparative genomics of rhizobia. Genome Res. 18:1472-1483.
2. Csuros M, Juhos S, Berces A. 2010. Fast mapping and precise alignment of AB SOLiD color reads to reference DNA, p 176-188. In Moulton V, SinghM(ed), Proceedings of the 10th International Conference on Algorithms in Bioinformatics. Springer-Verlag, Berlin, Germany.
3. Cuadrado V, Gomila M, Merini L, Giulietti AM, Moore ER. 2010. Cupriavidus pampae sp. nov., a novel herbicide-degrading bacterium isolated from agricultural soil. Int. J. Syst. Evol. Microbiol. 60:2606-2612.
4. Fischer J, Kappelmeyer U, Kastner M, Schauer F, Heipieper HJ. 2010. The degradation of bisphenol A by the newly isolated bacterium Cupriavidus basilensis JF1 can be enhanced by biostimulation with phenol. Int. Biodeterior. Biodegradation 64:324 -330.
5. Goris J, et al. 2001. Classification of metal-resistant bacteria from industrial biotopes as Ralstonia campinensis sp. nov., Ralstonia metallidurans sp. nov. and Ralstonia basilensis Steinle et al. emend. Int. J. Syst. Evol. Microbiol. 51:1773-1782.
6. Janssen PJ, et al. 2010. The complete genome sequence of Cupriavidus metallidurans strain CH34, a master survivalist in harsh and anthropohenic environments. PLoS One 5:e10433.
7. Koopman F, Wierckx N, de Winde JH, Ruijssenaars HJ. 2010. Identification and characterization of the furfural and 5-(hydroxymethyl)furfural degradation pathways of Cupriavidus basilensis HMF14. Proc. Natl. Acad. Sci. U. S. A. 107:4919-4924.
8. Lykidis A, et al. 2010. The complete multipartite genome sequence of Cupriavidus necator JMP134, a versatile pollutant degrader. PLoS One 5:e9729.
9. Pérez-Pantoja D, De la Iglesia R, Pieper DH, González B. 2008. Metabolic reconstruction of aromatic compounds degradation from the genome of the amazing pollutant-degrading bacterium Cupriavidus necator JMP 134. FEMS Microbiol. Rev. 32:736-794.
10. Poehlein A, Kusian B, Friedrich B, Daniel R, Bowien B. 2011. Complete genome sequence of the type strain Cupriavidus necator N-1. J. Bacteriol. 193:5017.
11. Pohlmann A, et al. 2006. Genome sequence of the bioplastic-producing "Knallgas" bacterium Ralstonia eutropha H16. Nat. Biotechnol. 24:1257- 1262.
12. Stamper DM, Radosevich M, Hallberg KB, Traina SJ, Tuovinen OH. 2002. Ralstonia basilensis M91-3, a denitrifying soil bacterium capable of using S-triazines as nitrogen sources. Can. J. Microbiol. 48:1089-1098.
13. Steinle P, Stucki G, Stettler R, Hanselmann KW. 1998. Aerobic mineralization of 2,6-dichlorophenol by Ralstonia sp. strain RK1. Appl. Environ. Microbiol. 64:2566-2571.
14. Zilouei H, Soares A, Murto M, Guieysse B, Mattiasson B. 2006. Influence of temperature on process efficiency and microbial community response during the biological removal of chlorophenols in a packed-bed bioreactor. Appl. Microbiol. Biotechnol. 72:591-599.