GECA: A fast tool for gene evolution and conservation analysis in eukaryotic protein families

Bioinformatics

Volumn 28, Issue 10, 2012, Pages 1398-1399

  Fawal, Nizar ^a,b   Savelli, Bruno ^a,b   Dunand, Christophe ^a,b   Mathé, Catherine ^a,b  

^a UNIVERSITÉ DE TOULOUSE   (France)

^b Centre National de la Recherche Scientifique   (France)

Author keywords

[No Author keywords available]

Indexed keywords

EUKARYOTA;

PROTEIN;

ARTICLE; COMPUTER PROGRAM; EUKARYOTE; EXON; GENETICS; INTRON; MOLECULAR EVOLUTION; NUCLEOTIDE SEQUENCE; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS;

CONSERVED SEQUENCE; EUKARYOTA; EVOLUTION, MOLECULAR; EXONS; INTRONS; PROTEINS; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, PROTEIN; SOFTWARE;

EID: 84861121514     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/bts153     Document Type: Article

References (5)

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2. Katoh,K. et al. (2002) MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res., 30, 3059-3066.
3. Koua,D. et al. (2009) PeroxiBase: a database with new tools for peroxidase family classification. Nucleic Acids Res., 37, D261-D266.
4. Rambaldi,D. and Ciccarelli,F. (2009) FancyGene: dynamic visualization of gene structures and proteindomain architectures on genomic loci. Bioinformatics, 25, 2281-2282.
5. Wilkerson,M.D. et al. (2009) Common introns within orthologous genes: software and application to plants. Brief. Bioinform., 10, 631-644.