-
1
-
-
60149091189
-
Regulation of translation initiation in eukaryotes: Mechanisms and biological targets
-
Sonenberg N., Hinnebusch A. G., Regulation of translation initiation in eukaryotes: mechanisms and biological targets Cell 2009 136 4 731 745
-
(2009)
Cell
, vol.136
, Issue.4
, pp. 731-745
-
-
Sonenberg, N.1
Hinnebusch, A.G.2
-
2
-
-
78649375395
-
Translational regulation of gene expression during conditions of cell stress
-
Spriggs K. A., Bushell M., Willis A. E., Translational regulation of gene expression during conditions of cell stress Molecular Cell 2010 40 2 228 237
-
(2010)
Molecular Cell
, vol.40
, Issue.2
, pp. 228-237
-
-
Spriggs, K.A.1
Bushell, M.2
Willis, A.E.3
-
3
-
-
78651468719
-
Cap-assisted internal initiation of translation of histone H4
-
Martin F., Barends S., Jaeger S., Schaeffer L., Prongidi-Fix L., Eriani G., Cap-assisted internal initiation of translation of histone H4 Molecular Cell 2011 41 197 209
-
(2011)
Molecular Cell
, vol.41
, pp. 197-209
-
-
Martin, F.1
Barends, S.2
Jaeger, S.3
Schaeffer, L.4
Prongidi-Fix, L.5
Eriani, G.6
-
4
-
-
79958100720
-
The cap-binding translation initiation factor, eIF4E, binds a pseudoknot in a viral cap-independent translation element
-
Wang Z., Parisien M., Scheets K., Miller W. A., The cap-binding translation initiation factor, eIF4E, binds a pseudoknot in a viral cap-independent translation element Structure 2011 19 868 880
-
(2011)
Structure
, vol.19
, pp. 868-880
-
-
Wang, Z.1
Parisien, M.2
Scheets, K.3
Miller, W.A.4
-
5
-
-
0142137125
-
Upstream AUGs in embryonic proinsulin mRNA control its low translation level
-
DOI 10.1093/emboj/cdg515
-
Hernandez-Sanchez C., Mansilla A., de la Rosa E. J., Pollerberg G. E., Martnez-Salas E., de Pablo F., Upstream AUGs in embryonic proinsulin mRNA control its low translation level The EMBO Journal 2003 22 20 5582 5592 (Pubitemid 37279967)
-
(2003)
EMBO Journal
, vol.22
, Issue.20
, pp. 5582-5592
-
-
Hernandez-Sanchez, C.1
Mansilla, A.2
De La Rosa, E.J.3
Pollerberg, G.E.4
Martinez-Salas, E.5
De Pablo, F.6
-
6
-
-
80051757198
-
Secondary structure and the role in translation initiation of the 5′-terminal region of p53 mRNA
-
Blaszczyk L., Ciesiolka J., Secondary structure and the role in translation initiation of the 5′-terminal region of p53 mRNA Biochemistry 2011 50 7080 7092
-
(2011)
Biochemistry
, vol.50
, pp. 7080-7092
-
-
Blaszczyk, L.1
Ciesiolka, J.2
-
7
-
-
33749237734
-
Oscillating kissing stem-loop interactions mediate 5′ scanning-dependent translation by a viral 3′-cap-independent translation element
-
DOI 10.1261/rna.115606
-
Rakotondrafara A. M., Polacek C., Harris E., Miller W. A., Oscillating kissing stem-loop interactions mediate 5′ scanning-dependent translation by a viral 3′-cap-independent translation element RNA 2006 12 10 1893 1906 (Pubitemid 44484262)
-
(2006)
RNA
, vol.12
, Issue.10
, pp. 1893-1906
-
-
Rakotondrafara, A.M.1
Polacek, C.2
Harris, E.3
Miller, W.A.4
-
8
-
-
66149137639
-
Translational reprogramming following UVB irradiation is mediated by DNA-PKcs and allows selective recruitment to the polysomes of mRNAs encoding DNA repair enzymes
-
Powley I. R., Kondrashov A., Young L. A., Dobbyn H. C., Hill K., Cannell I. G., Stoneley M., Kong Y. W., Cotes J. A., Smith G. C. M., Wek R., Hayes C., Gant T. W., Spriggs K. A., Bushell M., Willis A. E., Translational reprogramming following UVB irradiation is mediated by DNA-PKcs and allows selective recruitment to the polysomes of mRNAs encoding DNA repair enzymes Genes and Development 2009 23 10 1207 1220
-
(2009)
Genes and Development
, vol.23
, Issue.10
, pp. 1207-1220
-
-
Powley, I.R.1
Kondrashov, A.2
Young, L.A.3
Dobbyn, H.C.4
Hill, K.5
Cannell, I.G.6
Stoneley, M.7
Kong, Y.W.8
Cotes, J.A.9
Smith, G.C.M.10
Wek, R.11
Hayes, C.12
Gant, T.W.13
Spriggs, K.A.14
Bushell, M.15
Willis, A.E.16
-
9
-
-
33751029961
-
Translational control of regA, a key gene controlling cell differentiation in Volvox carteri
-
DOI 10.1242/dev.02582
-
Babinger K., Hallmann A., Schmitt R., Translational control of regA, a key gene controlling cell differentiation in Volvox carteri Development 2006 133 20 4045 4051 (Pubitemid 44756197)
-
(2006)
Development
, vol.133
, Issue.20
, pp. 4045-4051
-
-
Babinger, K.1
Hallmann, A.2
Schmitt, R.3
-
10
-
-
77449136427
-
A profusion of upstream open reading frame mechanisms in polyamine-responsive translational regulation
-
Ivanov I. P., Atkins J. F., Michael A. J., A profusion of upstream open reading frame mechanisms in polyamine-responsive translational regulation Nucleic Acids Research 2009 38 2 353 359
-
(2009)
Nucleic Acids Research
, vol.38
, Issue.2
, pp. 353-359
-
-
Ivanov, I.P.1
Atkins, J.F.2
Michael, A.J.3
-
11
-
-
79955452990
-
Ribosome binding to a 5′ translational enhancer is altered in the presence of the 3′ untranslated region in cap-independent translation of turnip crinkle virus
-
Stupina V. A., Yuan X., Meskauskas A., Dinman J. D., Simon A. E., Ribosome binding to a 5′ translational enhancer is altered in the presence of the 3′ untranslated region in cap-independent translation of turnip crinkle virus Journal of Virology 2011 85 4638 4653
-
(2011)
Journal of Virology
, vol.85
, pp. 4638-4653
-
-
Stupina, V.A.1
Yuan, X.2
Meskauskas, A.3
Dinman, J.D.4
Simon, A.E.5
-
12
-
-
70349138081
-
The 3′ end of Turnip crinkle virus contains a highly interactive structure including a translational enhancer that is disrupted by binding to the RNA-dependent RNA polymerase
-
Yuan X., Shi K., Meskauskas A., Simon A. E., The 3′ end of Turnip crinkle virus contains a highly interactive structure including a translational enhancer that is disrupted by binding to the RNA-dependent RNA polymerase RNA 2009 15 10 1849 1864
-
(2009)
RNA
, vol.15
, Issue.10
, pp. 1849-1864
-
-
Yuan, X.1
Shi, K.2
Meskauskas, A.3
Simon, A.E.4
-
13
-
-
42749086185
-
The impact of RNA structure on picornavirus IRES activity
-
Martnez-Salas E., The impact of RNA structure on picornavirus IRES activity Trends in Microbiology 2008 16 5 230 237
-
(2008)
Trends in Microbiology
, vol.16
, Issue.5
, pp. 230-237
-
-
Martnez-Salas, E.1
-
14
-
-
79551554217
-
Cellular IRES-mediated translation: The war of ITAFs in pathophysiological states
-
Komar A. A., Hatzoglou M., Cellular IRES-mediated translation: the war of ITAFs in pathophysiological states Cell Cycle 2011 10 229 240
-
(2011)
Cell Cycle
, vol.10
, pp. 229-240
-
-
Komar, A.A.1
Hatzoglou, M.2
-
15
-
-
0023720048
-
Internal initiation of translation of eukaryotic mRNA directed by a sequence derived from poliovirus RNA
-
Pelletier J., Sonenberg N., Internal initiation of translation of eukaryotic mRNA directed by a sequence derived from poliovirus RNA Nature 1988 334 6180 320 325
-
(1988)
Nature
, vol.334
, Issue.6180
, pp. 320-325
-
-
Pelletier, J.1
Sonenberg, N.2
-
16
-
-
0023758546
-
A segment of the 5′ nontranslated region of encephalomyocarditis virus RNA directs internal entry of ribosomes during in vitro translation
-
Jang S. K., Krausslich H. G., Nicklin M. J. H., Duke G. M., Palmenberg A. C., Wimmer E., A segment of the 5′ nontranslated region of encephalomyocarditis virus RNA directs internal entry of ribosomes during in vitro translation Journal of Virology 1988 62 8 2636 2643
-
(1988)
Journal of Virology
, vol.62
, Issue.8
, pp. 2636-2643
-
-
Jang, S.K.1
Krausslich, H.G.2
Nicklin, M.J.H.3
Duke, G.M.4
Palmenberg, A.C.5
Wimmer, E.6
-
17
-
-
0027289282
-
A single nucleotide substitution in the internal ribosome entry site of foot-and-mouth disease virus leads to enhanced cap-independent translation in vivo
-
Martinez-Salas E., Saiz J. C., Davila M., Belsham G. J., Domingo E., A single nucleotide substitution in the internal ribosome entry site of foot-and-mouth disease virus leads to enhanced cap-independent translation in vivo Journal of Virology 1993 67 7 3748 3755 (Pubitemid 23180695)
-
(1993)
Journal of Virology
, vol.67
, Issue.7
, pp. 3748-3755
-
-
Martinez-Salas, E.1
Saiz, J.-C.2
Davila, M.3
Belsham, G.J.4
Domingo, E.5
-
18
-
-
10644253021
-
Functional and Structural Similarities between the Internal Ribosome Entry Sites of Hepatitis C Virus and Porcine Teschovirus, a Picornavirus
-
DOI 10.1128/JVI.78.9.4487-4497.2004
-
Pisarev A. V., Chard L. S., Kaku Y., Johns H. L., Shatsky I. N., Belsham G. J., Functional and structural similarities between the internal ribosome entry sites of hepatitis C virus and porcine teschovirus, a picornavirus Journal of Virology 2004 78 9 4487 4497 (Pubitemid 38501068)
-
(2004)
Journal of Virology
, vol.78
, Issue.9
, pp. 4487-4497
-
-
Pisarev, A.V.1
Chard, L.S.2
Kaku, Y.3
Johns, H.L.4
Shatsky, I.N.5
Belsham, G.J.6
-
19
-
-
80455173909
-
The mechanism of translation initiation on Aichivirus RNA mediated by a novel type of picornavirus IRES
-
Yu Y., Sweeney T. R., Kafasla P., Jackson R. J., Pestova T. V., Hellen C. U., The mechanism of translation initiation on Aichivirus RNA mediated by a novel type of picornavirus IRES The EMBO Journal 2011 30 4423 4436
-
(2011)
The EMBO Journal
, vol.30
, pp. 4423-4436
-
-
Yu, Y.1
Sweeney, T.R.2
Kafasla, P.3
Jackson, R.J.4
Pestova, T.V.5
Hellen, C.U.6
-
20
-
-
79955407970
-
Structural features of the Seneca valley virus internal ribosome entry site (IRES) element: A picornavirus with a pestivirus-like IRES
-
Willcocks M. M., Locker N., Gomwalk Z., Structural features of the Seneca valley virus internal ribosome entry site (IRES) element: a picornavirus with a pestivirus-like IRES Journal of Virology 2011 85 4452 4461
-
(2011)
Journal of Virology
, vol.85
, pp. 4452-4461
-
-
Willcocks, M.M.1
Locker, N.2
Gomwalk, Z.3
-
21
-
-
0030219426
-
Structural requirements for initiation of translation by internal ribosome entry within genome-length hepatitis C virus RNA
-
DOI 10.1006/viro.1996.0395
-
Honda M., Ping L. H., Rijnbrand R. C. A., Amphlett E., Clarke B., Rowlands D., Lemon S. M., Structural requirements for initiation of translation by internal ribosome entry within genome-length hepatitis C virus RNA Virology 1996 222 1 31 42 (Pubitemid 26281356)
-
(1996)
Virology
, vol.222
, Issue.1
, pp. 31-42
-
-
Honda, M.1
Ping, L.-H.2
Rijnbrand, R.C.A.3
Amphlett, E.4
Clarke, B.5
Rowlands, D.6
Lemon, S.M.7
-
22
-
-
0031060497
-
Internal entry of ribosomes is directed by the 5′ noncoding region of classical swine fever virus and is dependent on the presence of an RNA pseudoknot upstream of the initiation codon
-
Rijnbrand R., van der Straaten T., van Rijn P. A., Spaan W. J. M., Bredenbeek P. J., Internal entry of ribosomes is directed by the 5′ noncoding region of classical swine fever virus and is dependent on the presence of an RNA pseudoknot upstream of the initiation codon Journal of Virology 1997 71 1 451 457
-
(1997)
Journal of Virology
, vol.71
, Issue.1
, pp. 451-457
-
-
Rijnbrand, R.1
Van Der Straaten, T.2
Van Rijn, P.A.3
Spaan, W.J.M.4
Bredenbeek, P.J.5
-
23
-
-
79953700874
-
A conserved structure within the HIV gag open reading frame that controls translation initiation directly recruits the 40S subunit and eIF3
-
Locker N., Chamond N., Sargueil B., A conserved structure within the HIV gag open reading frame that controls translation initiation directly recruits the 40S subunit and eIF3 Nucleic Acids Research 2011 39 6 2367 2377
-
(2011)
Nucleic Acids Research
, vol.39
, Issue.6
, pp. 2367-2377
-
-
Locker, N.1
Chamond, N.2
Sargueil, B.3
-
24
-
-
80051778062
-
Activity of the human immunodeficiency virus type 1 cell cycle-dependent internal ribosomal entry site is modulated by IRES trans-acting factors
-
Vallejos M., Deforges J., Plank T. D., Activity of the human immunodeficiency virus type 1 cell cycle-dependent internal ribosomal entry site is modulated by IRES trans-acting factors Nucleic Acids Research 2011 39 6186 6200
-
(2011)
Nucleic Acids Research
, vol.39
, pp. 6186-6200
-
-
Vallejos, M.1
Deforges, J.2
Plank, T.D.3
-
25
-
-
0029102253
-
Alternative translation initiation of the Moloney murine leukemia virus mRNA controlled by internal ribosome entry involving the p57/PTB splicing factor
-
Vagner S., Waysbort A., Marenda M., Gensac M. C., Amalric F., Prats A. C., Alternative translation initiation of the Moloney murine leukemia virus mRNA controlled by internal ribosome entry involving the p57/PTB splicing factor The Journal of Biological Chemistry 1995 270 35 20376 20383
-
(1995)
The Journal of Biological Chemistry
, vol.270
, Issue.35
, pp. 20376-20383
-
-
Vagner, S.1
Waysbort, A.2
Marenda, M.3
Gensac, M.C.4
Amalric, F.5
Prats, A.C.6
-
26
-
-
41149153280
-
A dormant internal ribosome entry site controls translation of feline immunodeficiency virus
-
DOI 10.1128/JVI.02038-07
-
Camerini V., Decimo D., Balvay L., Pistello M., Bendinelli M., Darlix J. L., Ohlmann T., A dormant internal ribosome entry site controls translation of feline immunodeficiency virus Journal of Virology 2008 82 7 3574 3583 (Pubitemid 351429933)
-
(2008)
Journal of Virology
, vol.82
, Issue.7
, pp. 3574-3583
-
-
Camerini, V.1
Decimo, D.2
Balvay, L.3
Pistello, M.4
Bendinelli, M.5
Darlix, J.-L.6
Ohlmann, T.7
-
27
-
-
77449087237
-
The 5′-untranslated region of the mouse mammary tumor virus mRNA exhibits cap-independent translation initiation
-
Vallejos M., Ramdohr P., Valiente-Echeverra F., Tapia K., Rodriguez F. E., Lowy F., Huidobro-Toro J. P., Dangerfield J. A., Lpez-Lastra M., The 5′-untranslated region of the mouse mammary tumor virus mRNA exhibits cap-independent translation initiation Nucleic Acids Research 2009 38 2 618 632
-
(2009)
Nucleic Acids Research
, vol.38
, Issue.2
, pp. 618-632
-
-
Vallejos, M.1
Ramdohr, P.2
Valiente-Echeverra, F.3
Tapia, K.4
Rodriguez, F.E.5
Lowy, F.6
Huidobro-Toro, J.P.7
Dangerfield, J.A.8
Lpez-Lastra, M.9
-
28
-
-
0034740797
-
The 5′ untranslated region of Rhopalosiphum padi virus contains an internal ribosome entry site which functions efficiently in mammalian, plant, and insect translation systems
-
DOI 10.1128/JVI.75.21.10244-10249.2001
-
Woolaway K. E., Lazaridis K., Belsham G. J., Carter M. J., Roberts L. O., The 5′ untranslated region of Rhopalosiphum padi virus contains an internal ribosome entry site which functions efficiently in mammalian, plant, and insect translation systems Journal of Virology 2001 75 21 10244 10249 (Pubitemid 32948054)
-
(2001)
Journal of Virology
, vol.75
, Issue.21
, pp. 10244-10249
-
-
Woolaway, K.E.1
Lazaridis, K.2
Belsham, G.J.3
Carter, M.J.4
Roberts, L.O.5
-
29
-
-
0034682720
-
Initiation of protein synthesis from the A site of the ribosome
-
Wilson J. E., Pestova T. V., Hellen C. U. T., Sarnow P., Initiation of protein synthesis from the A site of the ribosome Cell 2000 102 4 511 520
-
(2000)
Cell
, vol.102
, Issue.4
, pp. 511-520
-
-
Wilson, J.E.1
Pestova, T.V.2
Hellen, C.U.T.3
Sarnow, P.4
-
30
-
-
72849123025
-
Bioinformatic evidence for a stem-loop structure 5′-adjacent to the IGR-IRES and for an overlapping gene in the bee paralysis dicistroviruses
-
Firth A. E., Wang Q. S., Jan E., Atkins J. F., Bioinformatic evidence for a stem-loop structure 5′-adjacent to the IGR-IRES and for an overlapping gene in the bee paralysis dicistroviruses Virology Journal 2009 6, article 193
-
(2009)
Virology Journal
, vol.6193
-
-
Firth, A.E.1
Wang, Q.S.2
Jan, E.3
Atkins, J.F.4
-
31
-
-
35048867791
-
Ectropis obliqua picorna-like virus IRES-driven internal initiation of translation in cell systems derived from different origins
-
DOI 10.1099/vir.0.83201-0
-
Lu J., Hu Y., Hu L., Zong S., Cai D., Wang J., Yu H., Zhang J., Ectropis obliqua picorna-like virus IRES-driven internal initiation of translation in cell systems derived from different origins Journal of General Virology 2007 88 10 2834 2838 (Pubitemid 47555038)
-
(2007)
Journal of General Virology
, vol.88
, Issue.10
, pp. 2834-2838
-
-
Lu, J.1
Hu, Y.2
Hu, L.3
Zong, S.4
Cai, D.5
Wang, J.6
Yu, H.7
Zhang, J.8
-
32
-
-
33751403907
-
Characterization of the 5′ internal ribosome entry site of Plautia stali intestine virus
-
DOI 10.1099/vir.0.82193-0
-
Shibuya N., Nakashima N., Characterization of the 5′ internal ribosome entry site of Plautia stali intestine virus Journal of General Virology 2006 87 12 3679 3686 (Pubitemid 44817002)
-
(2006)
Journal of General Virology
, vol.87
, Issue.12
, pp. 3679-3686
-
-
Shibuya, N.1
Nakashima, N.2
-
33
-
-
23044504423
-
Characterization of internal ribosomal entry sites of Triatoma virus
-
DOI 10.1099/vir.0.80842-0
-
Czibener C., Alvarez D., Scodeller E., Gamarnik A. V., Characterization of internal ribosomal entry sites of Triatoma virus Journal of General Virology 2005 86 8 2275 2280 (Pubitemid 41057532)
-
(2005)
Journal of General Virology
, vol.86
, Issue.8
, pp. 2275-2280
-
-
Czibener, C.1
Alvarez, D.2
Scodeller, E.3
Gamarnik, A.V.4
-
34
-
-
33846142850
-
The RNA2 5′ leader of Blackcurrant reversion virus mediates effecient in vivo translation through an internal ribosomal entry site mechanism
-
DOI 10.1099/vir.0.82307-0
-
Karetnikov A., Lehto K., The RNA2 5′ leader of Blackcurrant reversion virus mediates efficient in vivo translation through an internal ribosomal entry site mechanism Journal of General Virology 2007 88 286 297 (Pubitemid 46085140)
-
(2007)
Journal of General Virology
, vol.88
, Issue.1
, pp. 286-297
-
-
Karentnikov, A.1
Lehto, K.2
-
35
-
-
79960781283
-
An internal ribosome entry site directs translation of the 3′-gene from pelargonium flower break virus genomic RNA: Implications for infectivity
-
article e22617
-
Fernandez-Miragall O., Hernandez C., An internal ribosome entry site directs translation of the 3′-gene from pelargonium flower break virus genomic RNA: implications for infectivity PLoS ONE 2011 6, article e22617
-
(2011)
PLoS ONE
, vol.6
-
-
Fernandez-Miragall, O.1
Hernandez, C.2
-
36
-
-
33747346414
-
An internal ribosome entry site located upstream of the crucifer-infecting tobamovirus coat protein (CP) gene can be used for CP synthesis in vivo
-
Dorokhov Y. L., Ivanov P. A., Komarova T. V., Skulachev M. V., Atabekov J. G., An internal ribosome entry site located upstream of the crucifer-infecting tobamovirus coat protein (CP) gene can be used for CP synthesis in vivo Journal of General Virology 2006 87 9 2693 2697
-
(2006)
Journal of General Virology
, vol.87
, Issue.9
, pp. 2693-2697
-
-
Dorokhov, Y.L.1
Ivanov, P.A.2
Komarova, T.V.3
Skulachev, M.V.4
Atabekov, J.G.5
-
37
-
-
0042808486
-
An unusual internal ribosomal entry site of inverted symmetry directs expression of a potato leafroll polerovirus replication-associated protein
-
DOI 10.1073/pnas.1332697100
-
Jaag H. M., Kawchuk L., Rohde W., Fischer R., Emans N., Prfer D., An unusual internal ribosomal entry site of inverted symmetry directs expression of a potato leafroll polerovirus replication-associated protein Proceedings of the National Academy of Sciences of the United States of America 2003 100 15 8939 8944 (Pubitemid 36899202)
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, Issue.15
, pp. 8939-8944
-
-
Jaag, H.M.1
Kawchuk, L.2
Rohde, W.3
Fischer, R.4
Emans, N.5
Prufer, D.6
-
38
-
-
0038757759
-
Synergism of the 3′-untranslated region and an internal ribosome entry site differentially enhances the translation of a plant virus coat protein
-
DOI 10.1074/jbc.M210212200
-
Koh D. C. Y., Wong S. M., Liu D. X., Synergism of the 3′-untranslated region and an internal ribosome entry site differentially enhances the translation of a plant virus coat protein The Journal of Biological Chemistry 2003 278 23 20565 20573 (Pubitemid 36806354)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.23
, pp. 20565-20573
-
-
Koh, D.C.-Y.1
Wong, S.-M.2
Liu, D.X.3
-
39
-
-
22844438327
-
Cap-independent translation of tobacco etch virus is conferred by an RNA pseudoknot in the 5′-leader
-
DOI 10.1074/jbc.M503576200
-
Zeenko V., Gallie D. R., Cap-independent translation of tobacco etch virus is conferred by an RNA pseudoknot in the 5′-leader The Journal of Biological Chemistry 2005 280 29 26813 26824 (Pubitemid 41040715)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.29
, pp. 26813-26824
-
-
Zeenko, V.1
Gallie, D.R.2
-
40
-
-
18044367338
-
Structural elements in the 5′-untranslated region of giardiavirus transcript essential for internal ribosome entry site-mediated translation initiation
-
DOI 10.1128/EC.4.4.742-754.2005
-
Garlapati S., Wang C. C., Structural elements in the 5′- untranslated region of giardiavirus transcript essential for internal ribosome entry site-mediated translation initiation Eukaryotic Cell 2005 4 4 742 754 (Pubitemid 40600428)
-
(2005)
Eukaryotic Cell
, vol.4
, Issue.4
, pp. 742-754
-
-
Garlapati, S.1
Wang, C.C.2
-
42
-
-
77956044600
-
Stress-inducible alternative translation initiation of human cytomegalovirus latency protein pUL138
-
Grainger L., Cicchini L., Rak M., Petrucelli A., Fitzgerald K. D., Semler B. L., Goodrum F., Stress-inducible alternative translation initiation of human cytomegalovirus latency protein pUL138 Journal of Virology 2010 84 18 9472 9486
-
(2010)
Journal of Virology
, vol.84
, Issue.18
, pp. 9472-9486
-
-
Grainger, L.1
Cicchini, L.2
Rak, M.3
Petrucelli, A.4
Fitzgerald, K.D.5
Semler, B.L.6
Goodrum, F.7
-
43
-
-
33745260977
-
19S late mRNAs of simian virus 40 have an internal ribosome entry site upstream of the virion structural protein 3 coding sequence
-
DOI 10.1128/JVI.00517-06
-
Yu Y., Alwine J. C., 19S late mRNAs of simian virus 40 have an internal ribosome entry site upstream of the virion structural protein 3 coding sequence Journal of Virology 2006 80 13 6553 6558 (Pubitemid 43927456)
-
(2006)
Journal of Virology
, vol.80
, Issue.13
, pp. 6553-6558
-
-
Yu, Y.1
Alwine, J.C.2
-
44
-
-
34147095918
-
Cell specific internal translation efficiency of Epstein-Barr virus present in solid organ transplant patients
-
DOI 10.1002/jmv.20854
-
Isaksson A., Berggren M., Ekeland-Sjoberg K., Samuelsson T., Ricksten A., Cell specific internal translation efficiency of Epstein-Barr virus present in solid organ transplant patients Journal of Medical Virology 2007 79 5 573 581 (Pubitemid 46564356)
-
(2007)
Journal of Medical Virology
, vol.79
, Issue.5
, pp. 573-581
-
-
Isaksson, A.1
Berggren, M.2
Ekeland-Sjoberg, K.3
Samuelsson, T.4
Ricksten, A.5
-
45
-
-
66149137293
-
Identification of an intercistronic internal ribosome entry site in a Marek's disease virus immediate-early gene
-
Tahiri-Alaoui A., Smith L. P., Baigent S., Kgosana L., Petherbridge L. J., Lambeth L. S., James W., Nair V., Identification of an intercistronic internal ribosome entry site in a Marek's disease virus immediate-early gene Journal of Virology 2009 83 11 5846 5853
-
(2009)
Journal of Virology
, vol.83
, Issue.11
, pp. 5846-5853
-
-
Tahiri-Alaoui, A.1
Smith, L.P.2
Baigent, S.3
Kgosana, L.4
Petherbridge, L.J.5
Lambeth, L.S.6
James, W.7
Nair, V.8
-
46
-
-
19944433283
-
Ribosome stalling regulates ires-mediated translation in eukaryotes, a parallel to prokaryotic attenuation
-
DOI 10.1016/j.molcel.2004.12.024, PII S1097276505010117
-
Fernandez J., Yaman I., Huang C., Liu H., Lopez A. B., Komar A. A., Caprara M. G., Merrick W. C., Snider M. D., Kaufman R. J., Lamers W. H., Hatzoglou M., Ribosome stalling regulates ires-mediated translation in eukaryotes, a parallel to prokaryotic attenuation Molecular Cell 2005 17 3 405 416 (Pubitemid 40193311)
-
(2005)
Molecular Cell
, vol.17
, Issue.3
, pp. 405-416
-
-
Fernandez, J.1
Yaman, I.2
Huang, C.3
Liu, H.4
Lopez, A.B.5
Komar, A.A.6
Caprara, M.G.7
Merrick, W.C.8
Snider, M.D.9
Kaufman, R.J.10
Lamers, W.H.11
Hatzoglou, M.12
-
47
-
-
33746855405
-
The identification of an internal ribosomal entry site in the 5′-untranslated region of p53 mRNA provides a novel mechanism for the regulation of its translation following DNA damage
-
DOI 10.1038/sj.onc.1209483, PII 1209483
-
Yang D. Q., Halaby M. J., Zhang Y., The identification of an internal ribosomal entry site in the 5′-untranslated region of p53 mRNA provides a novel mechanism for the regulation of its translation following DNA damage Oncogene 2006 25 33 4613 4619 (Pubitemid 44175120)
-
(2006)
Oncogene
, vol.25
, Issue.33
, pp. 4613-4619
-
-
Yang, D.-Q.1
Halaby, M.-J.2
Zhang, Y.3
-
48
-
-
66449098776
-
Cold-inducible RNA binding protein (CIRP) expression is modulated by alternative mRNAs
-
Al-Fageeh M. B., Smales C. M., Cold-inducible RNA binding protein (CIRP) expression is modulated by alternative mRNAs RNA 2009 15 6 1165 1176
-
(2009)
RNA
, vol.15
, Issue.6
, pp. 1165-1176
-
-
Al-Fageeh, M.B.1
Smales, C.M.2
-
49
-
-
2942628000
-
Bag-1 internal ribosome entry segment activity is promoted by structural changes mediated by poly(rC) binding protein 1 and recruitment of polypyrimidine tract binding protein 1
-
DOI 10.1128/MCB.24.12.5595-5605.2004
-
Pickering B. M., Mitchell S. A., Spriggs K. A., Stoneley M., Willis A. E., Bag-1 internal ribosome entry segment activity is promoted by structural changes mediated by poly(rC) binding protein 1 and recruitment of polypyrimidine tract binding protein 1 Molecular and Cellular Biology 2004 24 12 5595 5605 (Pubitemid 38738189)
-
(2004)
Molecular and Cellular Biology
, vol.24
, Issue.12
, pp. 5595-5605
-
-
Pickering, B.M.1
Mitchell, S.A.2
Spriggs, K.A.3
Stoneley, M.4
Willis, A.E.5
-
50
-
-
29244458635
-
The polypyrimidine tract-binding protein stimulates HIF-1α IRES-mediated translation during hypoxia
-
DOI 10.1093/nar/gki1000
-
Schepens B., Tinton S. A., Bruynooghe Y., Beyaert R., Cornelis S., The polypyrimidine tract-binding protein stimulates HIF-1 IRES-mediated translation during hypoxia Nucleic Acids Research 2005 33 21 6884 6894 (Pubitemid 41830492)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.21
, pp. 6884-6894
-
-
Schepens, B.1
Tinton, S.A.2
Bruynooghe, Y.3
Beyaert, R.4
Cornelis, S.5
-
51
-
-
0025883162
-
Internal initiation of translation mediated by the 5′ leader of a cellular mRNA
-
Macejak D. G., Sarnow P., Internal initiation of translation mediated by the 5′ leader of a cellular mRNA Nature 1991 353 6339 90 94 (Pubitemid 21912465)
-
(1991)
Nature
, vol.353
, Issue.6339
, pp. 90-94
-
-
Macejak, D.G.1
Sarnow, P.2
-
52
-
-
0034141958
-
Analysis of the c-myc IRES; A potential role for cell-type specific trans-acting factors and the nuclear compartment
-
Stoneley M., Subkhankulova T., Le Quesne J. P. C., Coldwell M. J., Jopling C. L., Belsham G. J., Willis A. E., Analysis of the c-myc IRES; A potential role for cell-type specific trans-acting factors and the nuclear compartment Nucleic Acids Research 2000 28 3 687 694 (Pubitemid 30068251)
-
(2000)
Nucleic Acids Research
, vol.28
, Issue.3
, pp. 687-694
-
-
Stoneley, M.1
Subkhankulova, T.2
Le Quesne, J.P.C.3
Coldwell, M.J.4
Jopling, C.L.5
Belsham, G.J.6
Willis, A.E.7
-
53
-
-
0141925805
-
A single internal ribosome entry site containing a G quartet RNA structure drives fibroblast growth factor 2 gene expression at four alternative translation initiation codons
-
DOI 10.1074/jbc.M305580200
-
Bonnal S., Schaeffer C., Créancier L., Clamens S., Moine H., Prats A. C., Vagner S., A single internal ribosome entry site containing a G quartet RNA structure drives fibroblast growth factor 2 gene expression at four alternative translation initiation codons The Journal of Biological Chemistry 2003 278 41 39330 39336 (Pubitemid 37248488)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.41
, pp. 39330-39336
-
-
Bonnal, S.1
Schaeffer, C.2
Creancier, L.3
Clamens, S.4
Moine, H.5
Prats, A.-C.6
Vagner, S.7
-
54
-
-
71449099399
-
A UV-responsive internal ribosome entry site enhances serine hydroxymethyltransferase 1 expression for DNA damage repair
-
Fox J. T., Shin W. K., Caudill M. A., Stover P. J., A UV-responsive internal ribosome entry site enhances serine hydroxymethyltransferase 1 expression for DNA damage repair The Journal of Biological Chemistry 2009 284 45 31097 31108
-
(2009)
The Journal of Biological Chemistry
, vol.284
, Issue.45
, pp. 31097-31108
-
-
Fox, J.T.1
Shin, W.K.2
Caudill, M.A.3
Stover, P.J.4
-
55
-
-
78650271083
-
An RNA G-quadruplex is essential for cap-independent translation initiation in human VEGF IRES
-
Morris M. J., Negishi Y., Pazsint C., Schonhoft J. D., Basu S., An RNA G-quadruplex is essential for cap-independent translation initiation in human VEGF IRES Journal of the American Chemical Society 2010 132 50 17831 17839
-
(2010)
Journal of the American Chemical Society
, vol.132
, Issue.50
, pp. 17831-17839
-
-
Morris, M.J.1
Negishi, Y.2
Pazsint, C.3
Schonhoft, J.D.4
Basu, S.5
-
56
-
-
77955834410
-
Distinct 5′ UTRs regulate XIAP expression under normal growth conditions and during cellular stress
-
Riley A., Jordan L. E., Holcik M., Distinct 5′ UTRs regulate XIAP expression under normal growth conditions and during cellular stress Nucleic Acids Research 2010 38 14 4665 4674
-
(2010)
Nucleic Acids Research
, vol.38
, Issue.14
, pp. 4665-4674
-
-
Riley, A.1
Jordan, L.E.2
Holcik, M.3
-
57
-
-
77949540575
-
NF45 functions as an IRES transacting factor that is required for translation of cIAP1 during the unfolded protein response
-
Graber T. E., Baird S. D., Kao P. N., Mathews M. B., Holcik M., NF45 functions as an IRES transacting factor that is required for translation of cIAP1 during the unfolded protein response Cell Death and Differentiation 2010 17 4 719 729
-
(2010)
Cell Death and Differentiation
, vol.17
, Issue.4
, pp. 719-729
-
-
Graber, T.E.1
Baird, S.D.2
Kao, P.N.3
Mathews, M.B.4
Holcik, M.5
-
58
-
-
0037117540
-
The caspase-cleaved DAP5 protein supports internal ribosome entry site-mediated translation of death proteins
-
DOI 10.1073/pnas.082102499
-
Henis-Korenblit S., Shani G., Sines T., Marash L., Shohat G., Kimchi A., The caspase-cleaved DAP5 protein supports internal ribosome entry site-mediated translation of death proteins Proceedings of the National Academy of Sciences of the United States of America 2002 99 8 5400 5405 (Pubitemid 34411560)
-
(2002)
Proceedings of the National Academy of Sciences of the United States of America
, vol.99
, Issue.8
, pp. 5400-5405
-
-
Henis-Korenblit, S.1
Shani, G.2
Sines, T.3
Marash, L.4
Shohat, G.5
Kimchi, A.6
-
59
-
-
73149097237
-
The human insulin receptor mRNA contains a functional internal ribosome entry segment
-
Spriggs K. A., Cobbold L. C., Ridley S. H., Coldwell M., Bottley A., Bushell M., Willis A. E., Siddle K., The human insulin receptor mRNA contains a functional internal ribosome entry segment Nucleic Acids Research 2009 37 17 5881 5893
-
(2009)
Nucleic Acids Research
, vol.37
, Issue.17
, pp. 5881-5893
-
-
Spriggs, K.A.1
Cobbold, L.C.2
Ridley, S.H.3
Coldwell, M.4
Bottley, A.5
Bushell, M.6
Willis, A.E.7
Siddle, K.8
-
60
-
-
0037349339
-
The Apaf-1 internal ribosome entry segment attains the correct structural conformation for function via interactions with PTB and unr
-
DOI 10.1016/S1097-2765(03)00093-5
-
Mitchell S. A., Spriggs K. A., Coldwell M. J., Jackson R. J., Willis A. E., The Apaf-1 internal ribosome entry segment attains the correct structural conformation for function via interactions with PTB and unr Molecular Cell 2003 11 3 757 771 (Pubitemid 36385128)
-
(2003)
Molecular Cell
, vol.11
, Issue.3
, pp. 757-771
-
-
Mitchell, S.A.1
Spriggs, K.A.2
Coldwell, M.J.3
Jackson, R.J.4
Willis, A.E.5
-
61
-
-
43449105311
-
DAP5 promotes cap-independent translation of Bcl-2 and CDK1 to facilitate cell survival during mitosis
-
Marash L., Liberman N., Henis-Korenblit S., Sivan G., Reem E., Elroy-Stein O., Kimchi A., DAP5 promotes cap-independent translation of Bcl-2 and CDK1 to facilitate cell survival during mitosis Molecular Cell 2008 30 4 447 459
-
(2008)
Molecular Cell
, vol.30
, Issue.4
, pp. 447-459
-
-
Marash, L.1
Liberman, N.2
Henis-Korenblit, S.3
Sivan, G.4
Reem, E.5
Elroy-Stein, O.6
Kimchi, A.7
-
62
-
-
7044249198
-
Internal ribosome entry site drives cap-independent translation of reaper and heat shock protein 70 mRNAs in Drosophila embryos
-
DOI 10.1261/rna.7154104
-
Hernndez G., Vzquez-Pianzola P., Sierra J. M., Rivera-Pomar R., Internal ribosome entry site drives cap-independent translation of reaper and heat shock protein 70 mRNAs in Drosophila embryos RNA 2004 10 11 1783 1797 (Pubitemid 39426378)
-
(2004)
RNA
, vol.10
, Issue.11
, pp. 1783-1797
-
-
Hernandez, G.1
Vazquez-Pianzola, P.2
Sierra, J.M.3
Rivera-Pomar, R.4
-
63
-
-
33846248288
-
Different modes of translation for hid, grim and sickle mRNAs in Drosophila
-
DOI 10.1038/sj.cdd.4401990, PII 4401990
-
Vazquez-Pianzola P., Hernndez G., Suter B., Rivera-Pomar R., Different modes of translation for hid, grim and sickle mRNAs in Drosophila Cell Death and Differentiation 2007 14 2 286 295 (Pubitemid 46092231)
-
(2007)
Cell Death and Differentiation
, vol.14
, Issue.2
, pp. 286-295
-
-
Vazquez-Pianzola, P.1
Hernandez, G.2
Suter, B.3
Rivera-Pomar, R.4
-
64
-
-
0026784990
-
Homeotic gene Antennapedia mRNA contains 5′-noncoding sequences that confer translational initiation by internal ribosome binding
-
Oh S. K., Scott M. P., Sarnow P., Homeotic gene Antennapedia mRNA contains 5′-noncoding sequences that confer translational initiation by internal ribosome binding Genes and Development 1992 6 9 1643 1653
-
(1992)
Genes and Development
, vol.6
, Issue.9
, pp. 1643-1653
-
-
Oh, S.K.1
Scott, M.P.2
Sarnow, P.3
-
65
-
-
79953321612
-
Quantitative profiling of in vivo-assembled RNA-protein complexes using a novel integrated proteomic approach
-
ARTICLE M110 007385
-
Tsai B. P., Wang X., Huang L., Waterman M. L., Quantitative profiling of in vivo-assembled RNA-protein complexes using a novel integrated proteomic approach Molecular Cellular Proteomics 2011 10 4, article M110 007385
-
(2011)
Molecular Cellular Proteomics
, vol.10
, Issue.4
-
-
Tsai, B.P.1
Wang, X.2
Huang, L.3
Waterman, M.L.4
-
66
-
-
0032798596
-
Differentiation-induced internal translation of c-sis mRNA: Analysis of the cis elements and their differentiation-linked binding to the hnRNP C protein
-
Sella O., Gerlitz G., Le S. Y., Elroy-Stein O., Differentiation-induced internal translation of c-sis mRNA: analysis of the cis elements and their differentiation-linked binding to the hnRNP C protein Molecular and Cellular Biology 1999 19 8 5429 5440 (Pubitemid 29339901)
-
(1999)
Molecular and Cellular Biology
, vol.19
, Issue.8
, pp. 5429-5440
-
-
Sella, O.1
Gerlitz, G.2
Le, S.-Y.3
Elroy-Stein, O.4
-
67
-
-
77955351670
-
A role for drosophila dFoxO and dFoxO 5′UTR internal ribosomal entry sites during fasting
-
ARTICLE E11521
-
Villa-Cuesta E., Sage B. T., Tatar M., A role for drosophila dFoxO and dFoxO 5′UTR internal ribosomal entry sites during fasting PLoS ONE 2010 5 7, article e11521
-
(2010)
PLoS ONE
, vol.5
, Issue.7
-
-
Villa-Cuesta, E.1
Sage, B.T.2
Tatar, M.3
-
68
-
-
33846522325
-
IRES-mediated functional coupling of transcription and translation amplifies insulin receptor feedback
-
DOI 10.1101/gad.1506407
-
Marr M. T., D'Alessio J. A., Puig O., Tjian R., IRES-mediated functional coupling of transcription and translation amplifies insulin receptor feedback Genes and Development 2007 21 2 175 183 (Pubitemid 46155811)
-
(2007)
Genes and Development
, vol.21
, Issue.2
, pp. 175-183
-
-
Marr II, M.T.1
D'Alessio, J.A.2
Puig, O.3
Tjian, R.4
-
69
-
-
85011942133
-
The intergenic spacer of the Drosophila Adh-Adhr dicistronic mRNA stimulates internal translation initiation
-
Ramanathan P., Guo J., Whitehead R. N., Brogna S., The intergenic spacer of the Drosophila Adh-Adhr dicistronic mRNA stimulates internal translation initiation RNA Biology 2008 5 3 149 156
-
(2008)
RNA Biology
, vol.5
, Issue.3
, pp. 149-156
-
-
Ramanathan, P.1
Guo, J.2
Whitehead, R.N.3
Brogna, S.4
-
70
-
-
14844331043
-
Cap-independent translation of maize Hsp101
-
DOI 10.1111/j.1365-313X.2005.02333.x
-
Dinkova T. D., Zepeda H., Martinez-Salas E., Martinez L. M., Nieto-Sotelo J., de Jimenez S. E., Cap-independent translation of maize Hsp101 Plant Journal 2005 41 5 722 731 (Pubitemid 40336003)
-
(2005)
Plant Journal
, vol.41
, Issue.5
, pp. 722-731
-
-
Dinkova, T.D.1
Zepeda, H.2
Martinez-Salas, E.3
Martinez, L.M.4
Nieto-Sotelo, J.5
Sanchez De Jimenez, E.6
-
71
-
-
46149097141
-
The 5′ untranslated region of the maize alcohol dehydrogenase gene contains an internal ribosome entry site
-
Mardanova E. S., Zamchuk L. A., Skulachev M. V., Ravin N. V., The 5′ untranslated region of the maize alcohol dehydrogenase gene contains an internal ribosome entry site Gene 2008 420 1 11 16
-
(2008)
Gene
, vol.420
, Issue.1
, pp. 11-16
-
-
Mardanova, E.S.1
Zamchuk, L.A.2
Skulachev, M.V.3
Ravin, N.V.4
-
72
-
-
73249129769
-
Characterization of the functional role of nucleotides within the URE2 IRES element and the requirements for eIF2A-mediated repression
-
Reineke L. C., Merrick W. C., Characterization of the functional role of nucleotides within the URE2 IRES element and the requirements for eIF2A-mediated repression RNA 2009 15 12 2264 2277
-
(2009)
RNA
, vol.15
, Issue.12
, pp. 2264-2277
-
-
Reineke, L.C.1
Merrick, W.C.2
-
73
-
-
34548535363
-
Cap-independent translation is required for starvation-induced differentiation in yeast
-
Gilbert W. V., Zhou K., Butler T. K., Doudna J. A., Cap-independent translation is required for starvation-induced differentiation in yeast Science 2007 317 5842 1224 1227
-
(2007)
Science
, vol.317
, Issue.5842
, pp. 1224-1227
-
-
Gilbert, W.V.1
Zhou, K.2
Butler, T.K.3
Doudna, J.A.4
-
74
-
-
33644874187
-
IRESite: The database of experimentally verified IRES structures (http://www.iresite.org/)
-
Mokrejs M., Vopalensky V., Kolenaty O., IRESite: the database of experimentally verified IRES structures (http://www.iresite.org/) Nucleic Acids Research 2006 34 D125 D130
-
(2006)
Nucleic Acids Research
, vol.34
-
-
Mokrejs, M.1
Vopalensky, V.2
Kolenaty, O.3
-
75
-
-
67650898259
-
IRSS: A web-based tool for automatic layout and analysis of IRES secondary structure prediction and searching system in silico
-
article 160
-
Wu T. Y., Hsieh C. C., Hong J. J., Chen C. Y., Tsai Y. S., IRSS: a web-based tool for automatic layout and analysis of IRES secondary structure prediction and searching system in silico BMC Bioinformatics 2009 10, article 160
-
(2009)
BMC Bioinformatics
, vol.10
-
-
Wu, T.Y.1
Hsieh, C.C.2
Hong, J.J.3
Chen, C.Y.4
Tsai, Y.S.5
-
76
-
-
2542509984
-
Involvement of the aphthovirus RNA region located between the two functional AUGs in start codon selection
-
Lpez de Quinto S., Martnez-Salas E., Involvement of the aphthovirus RNA region located between the two functional AUGs in start codon selection Virology 1999 255 2 324 336
-
(1999)
Virology
, vol.255
, Issue.2
, pp. 324-336
-
-
Lpez De Quinto, S.1
Martnez-Salas, E.2
-
77
-
-
0035967927
-
Derivation of a structural model for the c-myc IRES
-
DOI 10.1006/jmbi.2001.4745
-
Le Quesne J. P. C., Stoneley M., Fraser G. A., Willis A. E., Derivation of a structural model for the c-myc IRES Journal of Molecular Biology 2001 310 1 111 126 (Pubitemid 32619956)
-
(2001)
Journal of Molecular Biology
, vol.310
, Issue.1
, pp. 111-126
-
-
Le Quesne, J.P.C.1
Stoneley, M.2
Fraser, G.A.3
Willis, A.E.4
-
78
-
-
75549083389
-
UTRdb and UTRsite (RELEASE 2010): A collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs
-
Grillo G., Turi A., Licciulli F., Mignone F., Liuni S., Banfi S., Gennarino V. A., Horner D. S., Pavesi G., Picardi E., Pesole G., UTRdb and UTRsite (RELEASE 2010): a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs Nucleic Acids Research 2009 38 1 D75 D80
-
(2009)
Nucleic Acids Research
, vol.38
, Issue.1
-
-
Grillo, G.1
Turi, A.2
Licciulli, F.3
Mignone, F.4
Liuni, S.5
Banfi, S.6
Gennarino, V.A.7
Horner, D.S.8
Pavesi, G.9
Picardi, E.10
Pesole, G.11
-
79
-
-
42449114149
-
New insights into internal ribosome entry site elements relevant for viral gene expression
-
Martnez-Salas E., Pacheco A., Serrano P., Fernandez N., New insights into internal ribosome entry site elements relevant for viral gene expression Journal of General Virology 2008 89 3 611 626
-
(2008)
Journal of General Virology
, vol.89
, Issue.3
, pp. 611-626
-
-
Martnez-Salas, E.1
Pacheco, A.2
Serrano, P.3
Fernandez, N.4
-
80
-
-
34249899152
-
Foot-and-mouth disease virus infection induces proteolytic cleavage of PTB, eIF3a,b, and PABP RNA-binding proteins
-
DOI 10.1016/j.virol.2007.03.013, PII S0042682207001699
-
Rodrguez Pulido M., Serrano P., Siz M., Martnez-Salas E., Foot-and-mouth disease virus infection induces proteolytic cleavage of PTB, eIF3a,b, and PABP RNA-binding proteins Virology 2007 364 2 466 474 (Pubitemid 46873708)
-
(2007)
Virology
, vol.364
, Issue.2
, pp. 466-474
-
-
Rodriguez Pulido, M.1
Serrano, P.2
Saiz, M.3
Martinez-Salas, E.4
-
81
-
-
79952038041
-
Translation and protein processing
-
Ehrenfeld E. Domingo E. Roos R. ASM Press
-
Martinez-Salas E., Ryan M., Ehrenfeld E., Domingo E., Roos R., Translation and protein processing Picornaviruses 2010 ASM Press 141 161
-
(2010)
Picornaviruses
, pp. 141-161
-
-
Martinez-Salas, E.1
Ryan, M.2
-
82
-
-
34447530523
-
Differential factor requirement to assemble translation initiation complexes at the alternative start codons of foot-and-mouth disease virus RNA
-
DOI 10.1261/rna.469707
-
Andreev D. E., Fernandez-Miragall O., Ramajo J., Dmitriev S. E., Terenin I. M., Martinez-Salas E., Shatsky I. N., Differential factor requirement to assemble translation initiation complexes at the alternative start codons of foot-and-mouth disease virus RNA RNA 2007 13 8 1366 1374 (Pubitemid 47080480)
-
(2007)
RNA
, vol.13
, Issue.8
, pp. 1366-1374
-
-
Andreev, D.E.1
Fernandez-Miragall, O.2
Ramajo, J.3
Dmitriev, S.E.4
Terenin, I.M.5
Martinez-Salas, E.6
Shatsky, I.N.7
-
83
-
-
67249129336
-
Direct functional interaction of initiation factor eIF4G with type 1 internal ribosomal entry sites
-
de Breyne S., Yu Y., Unbehaun A., Pestova T. V., Hellen C. U. T., Direct functional interaction of initiation factor eIF4G with type 1 internal ribosomal entry sites Proceedings of the National Academy of Sciences of the United States of America 2009 106 23 9197 9202
-
(2009)
Proceedings of the National Academy of Sciences of the United States of America
, vol.106
, Issue.23
, pp. 9197-9202
-
-
De Breyne, S.1
Yu, Y.2
Unbehaun, A.3
Pestova, T.V.4
Hellen, C.U.T.5
-
84
-
-
0034852292
-
IRES interaction with translation initiation factors: Functional characterization of novel RNA contacts with eIF3, eIF4B, and eIF4GII
-
DOI 10.1017/S1355838201010433
-
Lpez de Quinto S., Lafuente E., Martnez-Salas E., IRES interaction with translation initiation factors: functional characterization of novel RNA contacts with eIF3, eIF4B, and eIF4GII RNA 2001 7 9 1213 1226 (Pubitemid 32831351)
-
(2001)
RNA
, vol.7
, Issue.9
, pp. 1213-1226
-
-
Lopez De Quinto, S.1
Lafuente, E.2
Martinez-Salas, E.3
-
86
-
-
80054080846
-
Crystal structure of the HCV IRES central domain reveals strategy for start-codon positioning
-
Berry K. E., Waghray S., Mortimer S. A., Bai Y., Doudna J. A., Crystal structure of the HCV IRES central domain reveals strategy for start-codon positioning Structure 2011 19 1456 1466
-
(2011)
Structure
, vol.19
, pp. 1456-1466
-
-
Berry, K.E.1
Waghray, S.2
Mortimer, S.A.3
Bai, Y.4
Doudna, J.A.5
-
87
-
-
33846959081
-
HCV and CSFV IRES domain II mediate eIF2 release during 80S ribosome assembly
-
Locker N., Easton L. E., Lukavsky P. J., HCV and CSFV IRES domain II mediate eIF2 release during 80S ribosome assembly The EMBO Journal 2007 26 3 795 805
-
(2007)
The EMBO Journal
, vol.26
, Issue.3
, pp. 795-805
-
-
Locker, N.1
Easton, L.E.2
Lukavsky, P.J.3
-
88
-
-
0035831269
-
Hepatitis C virus IRES RNA-induced changes in the conformation of the 40S ribosomal subunit
-
DOI 10.1126/science.1058409
-
Spahn C. M. T., Kieft J. S., Grassucci R. A., Penczek P. A., Zhou K., Doudna J. A., Frank J., Hepatitis C virus IRES RNA-induced changes in the conformation of the 40S ribosomal subunit Science 2001 291 5510 1959 1962 (Pubitemid 32216995)
-
(2001)
Science
, vol.291
, Issue.5510
, pp. 1959-1962
-
-
Spahn, C.M.T.1
Kieft, J.S.2
Grassucci, R.A.3
Penczek, P.A.4
Zhou, K.5
Doudna, J.A.6
Frank, J.7
-
89
-
-
38649087926
-
Factor requirements for translation initiation on the Simian picornavirus internal ribosomal entry site
-
DOI 10.1261/rna.696508
-
de Breyne S., Yu Y., Pestova T. V., Hellen C. U. T., Factor requirements for translation initiation on the Simian picornavirus internal ribosomal entry site RNA 2008 14 2 367 380 (Pubitemid 351171596)
-
(2008)
RNA
, vol.14
, Issue.2
, pp. 367-380
-
-
De Breyne, S.1
Yu, Y.2
Pestova, T.V.3
Hellen, C.U.T.4
-
90
-
-
70449717470
-
Conserved functional domains and a novel tertiary interaction near the pseudoknot drive translational activity of hepatitis C virus and hepatitis C virus-like internal ribosome entry sites
-
Easton L. E., Locker N., Lukavsky P. J., Conserved functional domains and a novel tertiary interaction near the pseudoknot drive translational activity of hepatitis C virus and hepatitis C virus-like internal ribosome entry sites Nucleic Acids Research 2009 37 16 5537 5549
-
(2009)
Nucleic Acids Research
, vol.37
, Issue.16
, pp. 5537-5549
-
-
Easton, L.E.1
Locker, N.2
Lukavsky, P.J.3
-
91
-
-
37849021316
-
TRNA-mRNA mimicry drives translation initiation from a viral IRES
-
Costantino D. A., Pfingsten J. S., Rambo R. P., Kieft J. S., tRNA-mRNA mimicry drives translation initiation from a viral IRES Nature Structural and Molecular Biology 2008 15 1 57 64
-
(2008)
Nature Structural and Molecular Biology
, vol.15
, Issue.1
, pp. 57-64
-
-
Costantino, D.A.1
Pfingsten, J.S.2
Rambo, R.P.3
Kieft, J.S.4
-
92
-
-
0032927056
-
Translation initiation at the CUU codon is mediated by the internal ribosome entry site of an insect picorna-like virus in vitro
-
Sasaki J., Nakashima N., Translation initiation at the CUU codon is mediated by the internal ribosome entry site of an insect picorna-like virus in vitro Journal of Virology 1999 73 2 1219 1226 (Pubitemid 29036774)
-
(1999)
Journal of Virology
, vol.73
, Issue.2
, pp. 1219-1226
-
-
Sasaki, J.1
Nakashima, N.2
-
93
-
-
59749102174
-
Functional analysis of structural motifs in dicistroviruses
-
Nakashima N., Uchiumi T., Functional analysis of structural motifs in dicistroviruses Virus Research 2009 139 2 137 147
-
(2009)
Virus Research
, vol.139
, Issue.2
, pp. 137-147
-
-
Nakashima, N.1
Uchiumi, T.2
-
94
-
-
0033539681
-
Identification of eukaryotic mRNAs that are translated at reduced cap binding complex elF4F concentrations using a cDNA microarray
-
Johannes G., Carter M. S., Eisen M. B., Brown P. O., Sarnow P., Identification of eukaryotic mRNAs that are translated at reduced cap binding complex elF4F concentrations using a cDNA microarray Proceedings of the National Academy of Sciences of the United States of America 1999 96 23 13118 13123
-
(1999)
Proceedings of the National Academy of Sciences of the United States of America
, vol.96
, Issue.23
, pp. 13118-13123
-
-
Johannes, G.1
Carter, M.S.2
Eisen, M.B.3
Brown, P.O.4
Sarnow, P.5
-
95
-
-
4644247805
-
Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: The IRES functions as an RNA-based translation factor
-
DOI 10.1016/j.cell.2004.08.001, PII S0092867404007469
-
Spahn C. M. T., Jan E., Mulder A., Grassucci R. A., Sarnow P., Frank J., Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: the IRES functions as an RNA-based translation factor Cell 2004 118 4 465 475 (Pubitemid 39485666)
-
(2004)
Cell
, vol.118
, Issue.4
, pp. 465-475
-
-
Spahn, C.M.T.1
Jan, E.2
Mulder, A.3
Grassucci, R.A.4
Sarnow, P.5
Frank, J.6
-
96
-
-
0031905698
-
A prokaryotic-like mode of cytoplasmic eukaryotic ribosome binding to the initiation codon during internal translation initation of hepatitis C and classical swine fever virus RNAs
-
Pestova T. V., Shatsky I. N., Fletcher S. P., Jackson R. J., Hellen C. U. T., A prokaryotic-like mode of cytoplasmic eukaryotic ribosome binding to the initiation codon during internal translation initation of hepatitis C and classical swine fever virus RNAs Genes and Development 1998 12 1 67 83 (Pubitemid 28083659)
-
(1998)
Genes and Development
, vol.12
, Issue.1
, pp. 67-83
-
-
Pestova, T.V.1
Shatsky, I.N.2
Fletcher, S.P.3
Jackson, R.J.4
Hellen, C.U.T.5
-
97
-
-
0033623486
-
Interaction of the elF4G initiation factor with the aphthovirus IRES is essential for internal translation initiation in vivo
-
Lopez de Quinto S., Martinez-Salas E., Interaction of the elF4G initiation factor with the aphthovirus IRES is essential for internal translation initiation in vivo RNA 2000 6 10 1380 1392
-
(2000)
RNA
, vol.6
, Issue.10
, pp. 1380-1392
-
-
Lopez De Quinto, S.1
Martinez-Salas, E.2
-
98
-
-
0030061153
-
Identification of an essential region for internal initiation of translation in the aphthovirus internal ribosome entry site and implications for viral evolution
-
Martinez-Salas E., Regalado M. P., Domingo E., Identification of an essential region for internal initiation of translation in the aphthovirus internal ribosome entry site and implications for viral evolution Journal of Virology 1996 70 2 992 998 (Pubitemid 26029017)
-
(1996)
Journal of Virology
, vol.70
, Issue.2
, pp. 992-998
-
-
Martinez-Salas, E.1
Regalado, M.P.2
Domingo, E.3
-
99
-
-
6944246045
-
Picornavirus IRES: Structure function relationship
-
DOI 10.2174/1381612043382657
-
Martinez-Salas E., Fernandez-Miragall O., Picornavirus IRES: structure function relationship Current Pharmaceutical Design 2004 10 3757 3767 (Pubitemid 39409868)
-
(2004)
Current Pharmaceutical Design
, vol.10
, Issue.30
, pp. 3757-3767
-
-
Martinez-Salas, E.1
Fernandez-Miragall, O.2
-
100
-
-
0033032196
-
Natural variation in translational activities of the 5' nontranslated RNAs of hepatitis C virus genotypes 1a and 1b: Evidence for a long-range RNA- RNA interaction outside of the internal ribosomal entry site
-
Honda M., Rijnbrand R., Abell G., Kim D., Lemon S. M., Natural variation in translational activities of the 5′ nontranslated RNAs of hepatitis C virus genotypes 1a and 1b: evidence for a long-range RNA- RNA interaction outside of the internal ribosomal entry site Journal of Virology 1999 73 6 4941 4951 (Pubitemid 29246755)
-
(1999)
Journal of Virology
, vol.73
, Issue.6
, pp. 4941-4951
-
-
Honda, M.1
Rijnbrand, R.2
Abell, G.3
Kim, D.4
Lemon, S.M.5
-
101
-
-
0033058862
-
Internal initiation of translation efficiency in different hepatitis C genotypes isolated from interferon treated patients
-
DOI 10.1007/s007050050499
-
Saiz J. C., Lopez de Quinto S., Ibarrola N., Internal initiation of translation efficiency in different hepatitis C genotypes isolated from interferon treated patients Archives of Virology 1999 144 215 229 (Pubitemid 29100898)
-
(1999)
Archives of Virology
, vol.144
, Issue.2
, pp. 215-229
-
-
Saiz, J.C.1
Lopez De Quinto, S.2
Ibarrola, N.3
Lopez-Labrador, F.-X.4
Sanchez-Tapias, J.-M.5
Rodes, J.6
Martinez-Salas, E.7
-
102
-
-
63349086790
-
Analysis of natural variants of the hepatitis C virus internal ribosome entry site reveals that primary sequence plays a key role in cap-independent translation
-
Barria M. I., Gonzalez A., Vera-Otarola J., Analysis of natural variants of the hepatitis C virus internal ribosome entry site reveals that primary sequence plays a key role in cap-independent translation Nucleic Acids Research 2009 37 957 971
-
(2009)
Nucleic Acids Research
, vol.37
, pp. 957-971
-
-
Barria, M.I.1
Gonzalez, A.2
Vera-Otarola, J.3
-
103
-
-
67349196058
-
Rescue of internal initiation of translation by RNA complementation provides evidence for a distribution of functions between individual IRES domains
-
Serrano P., Ramajo J., Martnez-Salas E., Rescue of internal initiation of translation by RNA complementation provides evidence for a distribution of functions between individual IRES domains Virology 2009 388 1 221 229
-
(2009)
Virology
, vol.388
, Issue.1
, pp. 221-229
-
-
Serrano, P.1
Ramajo, J.2
Martnez-Salas, E.3
-
104
-
-
77952721758
-
Modular domains of the Dicistroviridae intergenic internal ribosome entry site
-
Jang C. J., Jan E., Modular domains of the Dicistroviridae intergenic internal ribosome entry site RNA 2010 16 6 1182 1195
-
(2010)
RNA
, vol.16
, Issue.6
, pp. 1182-1195
-
-
Jang, C.J.1
Jan, E.2
-
105
-
-
1642499384
-
L-Myc protein synthesis is initiated by internal ribosome entry
-
DOI 10.1261/rna.5138804
-
Jopling C. L., Spriggs K. A., Mitchell S. A., Stoneley M., Willis A. E., L-Myc protein synthesis is initiated by internal ribosome entry RNA 2004 10 2 287 298 (Pubitemid 38129833)
-
(2004)
RNA
, vol.10
, Issue.2
, pp. 287-298
-
-
Jopling, C.L.1
Spriggs, K.A.2
Mitchell, S.A.3
Stoneley, M.4
Willis, A.E.5
-
106
-
-
80455168337
-
Structural basis for the biological relevance of the invariant apical stem in IRES-mediated translation
-
Fernandez N., Fernandez-Miragall O., Ramajo J., Structural basis for the biological relevance of the invariant apical stem in IRES-mediated translation Nucleic Acids Research 2011 39 8572 8585
-
(2011)
Nucleic Acids Research
, vol.39
, pp. 8572-8585
-
-
Fernandez, N.1
Fernandez-Miragall, O.2
Ramajo, J.3
-
107
-
-
79959452628
-
Common conformational changes induced in type 2 picornavirus IRESs by cognate trans-acting factors
-
Yu Y., Abaeva I. S., Marintchev A., Pestova T. V., Hellen C. U., Common conformational changes induced in type 2 picornavirus IRESs by cognate trans-acting factors Nucleic Acids Research 2011 39 4851 4865
-
(2011)
Nucleic Acids Research
, vol.39
, pp. 4851-4865
-
-
Yu, Y.1
Abaeva, I.S.2
Marintchev, A.3
Pestova, T.V.4
Hellen, C.U.5
-
108
-
-
78650261546
-
Structural analysis provides insights into the modular organization of picornavirus IRES
-
Fernandez N., Garcia-Sacristan A., Ramajo J., Briones C., Martinez-Salas E., Structural analysis provides insights into the modular organization of picornavirus IRES Virology 2011 409 251 261
-
(2011)
Virology
, vol.409
, pp. 251-261
-
-
Fernandez, N.1
Garcia-Sacristan, A.2
Ramajo, J.3
Briones, C.4
Martinez-Salas, E.5
-
109
-
-
0344980095
-
Long-range RNA interactions between structural domains of the aphthovirus internal ribosome entry site (IRES)
-
DOI 10.1017/S1355838299991240
-
Ramos R., Martnez-Salas E., Long-range RNA interactions between structural domains of the aphthovirus internal ribosome entry site (IRES) RNA 1999 5 10 1374 1383 (Pubitemid 29489819)
-
(1999)
RNA
, vol.5
, Issue.10
, pp. 1374-1383
-
-
Ramos, R.1
Martinez-Salas, E.2
-
110
-
-
31044449305
-
Evidence of reciprocal tertiary interactions between conserved motifs involved in organizing RNA structure essential for internal initiation of translation
-
DOI 10.1261/rna.2153206
-
Fernandez-Miragall O., Ramos R., Ramajo J., Martinez-Salas E., Evidence of reciprocal tertiary interactions between conserved motifs involved in organizing RNA structure essential for internal initiation of translation RNA 2006 12 223 234 (Pubitemid 43121927)
-
(2006)
RNA
, vol.12
, Issue.2
, pp. 223-234
-
-
Fernandez-Miragall, O.1
Ramos, R.2
Ramajo, J.3
Martinez-Salas, E.4
-
111
-
-
10744229009
-
Structural organization of a viral IRES depends on the integrity of the GNRA motif
-
DOI 10.1261/rna.5950603
-
Fernandez-Miragall O., Martinez-Salas E., Structural organization of a viral IRES depends on the integrity of the GNRA motif RNA 2003 9 1333 1344 (Pubitemid 37310864)
-
(2003)
RNA
, vol.9
, Issue.11
, pp. 1333-1344
-
-
Fernandez-Miragall, O.1
Martinez-Salas, E.2
-
112
-
-
4444253828
-
2+ binding properties of a conserved RNA motif of EMCV picornavirus IRES element
-
DOI 10.1093/nar/gkh805
-
Phelan M., Banks R. J., Conn G., Ramesh V., NMR studies of the structure and Mg 2+ binding properties of a conserved RNA motif of EMCV picornavirus IRES element Nucleic Acids Research 2004 32 16 4715 4724 (Pubitemid 39429675)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.16
, pp. 4715-4724
-
-
Phelan, M.1
Banks, R.J.2
Conn, G.3
Ramesh, V.4
-
113
-
-
2442457098
-
NMR Structures of Loop B RNAs from the Stem-Loop IV Domain of the Enterovirus Internal Ribosome Entry Site: A Single C to U Substitution Drastically Changes the Shape and Flexibility of RNA
-
DOI 10.1021/bi0363228
-
Du Z., Ulyanov N. B., Yu J., Andino R., James T. L., NMR structures of loop B RNAs from the stem-loop IV domain of the enterovirus internal ribosome entry site: a single C to U substitution drastically changes the shape and flexibility of RNA Biochemistry 2004 43 19 5757 5771 (Pubitemid 38623610)
-
(2004)
Biochemistry
, vol.43
, Issue.19
, pp. 5757-5771
-
-
Du, Z.1
Ulyanov, N.B.2
Yu, J.3
Andino, R.4
James, T.L.5
-
114
-
-
0030999946
-
Conserved structural motifs located in distal loops of aphthovirus internal ribosome entry site domain 3 are required for internal initiation of translation
-
Lopez de Quinto S., Martinez-Salas E., Conserved structural motifs located in distal loops of aphthovirus internal ribosome entry site domain 3 are required for internal initiation of translation Journal of Virology 1997 71 4171 4175 (Pubitemid 27172441)
-
(1997)
Journal of Virology
, vol.71
, Issue.5
, pp. 4171-4175
-
-
De Quinto, S.L.1
Martinez-Salas, E.2
-
115
-
-
0032863246
-
A selection system for functional internal ribosome entry site (IRES) elements: Analysis of the requirement for a conserved GNRA tetraloop in the encephalomyocarditis virus IRES
-
DOI 10.1017/S1355838299990301
-
Robertson M. E. M., Seamons R. A., Belsham G. J., A selection system for functional internal ribosome entry site (IRES) elements: analysis of the requirement for a conserved GNRA tetraloop in the encephalomyocarditis virus IRES RNA 1999 5 9 1167 1179 (Pubitemid 29422759)
-
(1999)
RNA
, vol.5
, Issue.9
, pp. 1167-1179
-
-
Robertson, M.E.M.1
Seamons, R.A.2
Belsham, G.J.3
-
116
-
-
72549101167
-
RPS25 is essential for translation initiation by the Dicistroviridae and hepatitis C viral IRESs
-
Landry D. M., Hertz M. I., Thompson S. R., RPS25 is essential for translation initiation by the Dicistroviridae and hepatitis C viral IRESs Genes and Development 2009 23 23 2753 2764
-
(2009)
Genes and Development
, vol.23
, Issue.23
, pp. 2753-2764
-
-
Landry, D.M.1
Hertz, M.I.2
Thompson, S.R.3
-
117
-
-
0037163132
-
Specific cleavage of hepatitis C virus RNA genome by human RNase P
-
DOI 10.1074/jbc.M203595200
-
Nadal A., Martell M., Lytle J. R., Lyons A. J., Robertson H. D., Cabot B., Esteban J. I., Esteban R., Guardia J., Gmez J., Specific cleavage of hepatitis C virus RNA genome by human RNase P The Journal of Biological Chemistry 2002 277 34 30606 30613 (Pubitemid 34970755)
-
(2002)
Journal of Biological Chemistry
, vol.277
, Issue.34
, pp. 30606-30613
-
-
Nadal, A.1
Martell, M.2
Robin Lytle, J.3
Lyons, A.J.4
Robertson, H.D.5
Cabot, B.6
Esteban, J.I.7
Esteban, R.8
Guardia, J.9
Gomez, J.10
-
118
-
-
0038373448
-
Detection of tRNA-like structure through RNase P cleavage of viral internal ribosome entry site RNAs near the AUG start triplet
-
DOI 10.1074/jbc.M304052200
-
Lyons A. J., Robertson H. D., Detection of tRNA-like structure through RNase P cleavage of viral internal ribosome entry site RNAs near the AUG start triplet The Journal of Biological Chemistry 2003 278 29 26844 26850 (Pubitemid 36876835)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.29
, pp. 26844-26850
-
-
Lyons, A.J.1
Robertson, H.D.2
-
119
-
-
34249103881
-
Characterization of a cyanobacterial RNase P ribozyme recognition motif in the IRES of foot-and-mouth disease virus reveals a unique structural element
-
DOI 10.1261/rna.506607
-
Serrano P., Gomez J., Martnez-Salas E., Characterization of a cyanobacterial RNase P ribozyme recognition motif in the IRES of foot-and-mouth disease virus reveals a unique structural element RNA 2007 13 6 849 859 (Pubitemid 46799819)
-
(2007)
RNA
, vol.13
, Issue.6
, pp. 849-859
-
-
Serrano, P.1
Gomez, J.2
Martinez-Salas, E.3
-
120
-
-
77950234365
-
Tailoring the switch from IRES-dependent to 5′-end-dependent translation with the RNase P ribozyme
-
Fernandez N., Martinez-Salas E., Tailoring the switch from IRES-dependent to 5′-end-dependent translation with the RNase P ribozyme RNA 16 852 862
-
RNA
, vol.16
, pp. 852-862
-
-
Fernandez, N.1
Martinez-Salas, E.2
-
121
-
-
14844339136
-
Characterizing the function and structural organization of the 5′ tRNA-like motif within the hepatitis C virus quasispecies
-
DOI 10.1093/nar/gki290
-
Piron M., Beguiristain N., Nadal A., Martinez-Salas E., Gomez J., Characterizing the function and structural organization of the 5′ tRNA-like motif within the hepatitis C virus quasispecies Nucleic Acids Research 2005 33 1487 1502 (Pubitemid 41418378)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.5
, pp. 1487-1502
-
-
Piron, M.1
Beguiristain, N.2
Nadal, A.3
Martinez-Salas, E.4
Gomez, J.5
-
122
-
-
38949196321
-
Was the initiation of translation in early eukaryotes IRES-driven?
-
Hernndez G., Was the initiation of translation in early eukaryotes IRES-driven? Trends in Biochemical Sciences 2008 33 2 58 64
-
(2008)
Trends in Biochemical Sciences
, vol.33
, Issue.2
, pp. 58-64
-
-
Hernndez, G.1
-
123
-
-
49649113339
-
Internal translation initiation on the foot-and-mouth disease virus IRES is affected by ribosomal stalk conformation
-
Martnez-Azorn F., Remacha M., Martnez-Salas E., Ballesta J. P. G., Internal translation initiation on the foot-and-mouth disease virus IRES is affected by ribosomal stalk conformation FEBS Letters 2008 582 20 3029 3032
-
(2008)
FEBS Letters
, vol.582
, Issue.20
, pp. 3029-3032
-
-
Martnez-Azorn, F.1
Remacha, M.2
Martnez-Salas, E.3
Ballesta, J.P.G.4
-
124
-
-
67649850379
-
Differential requirement of ribosomal protein S6 by plant RNA viruses with different translation initiation strategies
-
Yang C., Zhang C., Dittman J. D., Whitham S. A., Differential requirement of ribosomal protein S6 by plant RNA viruses with different translation initiation strategies Virology 2009 390 2 163 173
-
(2009)
Virology
, vol.390
, Issue.2
, pp. 163-173
-
-
Yang, C.1
Zhang, C.2
Dittman, J.D.3
Whitham, S.A.4
-
125
-
-
83255187900
-
Requirement of rRNA methylation for 80S ribosome assembly on a cohort of cellular Internal Ribosome Entry Sites
-
Basu A., Das P., Chaudhuri S., Requirement of rRNA methylation for 80S ribosome assembly on a cohort of cellular Internal Ribosome Entry Sites Molecular and Cellular Biology 2011 31 4482 4499
-
(2011)
Molecular and Cellular Biology
, vol.31
, pp. 4482-4499
-
-
Basu, A.1
Das, P.2
Chaudhuri, S.3
-
126
-
-
84855594206
-
Ribosomal deficiencies in Diamond-Blackfan anemia impair translation of transcripts essential for differentiation of murine and human erythroblasts
-
Horos R., Ijspeert H., Pospisilova D., Ribosomal deficiencies in Diamond-Blackfan anemia impair translation of transcripts essential for differentiation of murine and human erythroblasts Blood 2012 119 262 272
-
(2012)
Blood
, vol.119
, pp. 262-272
-
-
Horos, R.1
Ijspeert, H.2
Pospisilova, D.3
-
127
-
-
77953021773
-
The terminal loop of a 3′ proximal hairpin plays a critical role in replication and the structure of the 3′ region of Turnip crinkle virus
-
Yuan X., Shi K., Young M. Y. L., Simon A. E., The terminal loop of a 3′ proximal hairpin plays a critical role in replication and the structure of the 3′ region of Turnip crinkle virus Virology 2010 402 2 271 280
-
(2010)
Virology
, vol.402
, Issue.2
, pp. 271-280
-
-
Yuan, X.1
Shi, K.2
Young, M.Y.L.3
Simon, A.E.4
-
128
-
-
33749069918
-
The 3′ end of the foot-and-mouth disease virus genome establishes two distinct long-range RNA-RNA interactions with the 5′ and region
-
DOI 10.1099/vir.0.82059-0
-
Serrano P., Pulido M. R., Saiz M., Martinez-Salas E., The 3′ end of the foot-and-mouth disease virus genome establishes two distinct long-range RNA-RNA interactions with the 5′ end region Journal of General Virology 2006 87 3013 3022 (Pubitemid 44463910)
-
(2006)
Journal of General Virology
, vol.87
, Issue.10
, pp. 3013-3022
-
-
Serrano, P.1
Pulido Rodriguez, M.2
Saiz, M.3
Martinez-Salas, E.4
-
129
-
-
69049116216
-
A long-range RNA-RNA interaction between the 5′ and 3′ ends of the HCV genome
-
Romero-Lpez C., Berzal-Herranz A., A long-range RNA-RNA interaction between the 5′ and 3′ ends of the HCV genome RNA 2009 15 9 1740 1752
-
(2009)
RNA
, vol.15
, Issue.9
, pp. 1740-1752
-
-
Romero-Lpez, C.1
Berzal-Herranz, A.2
-
130
-
-
0037109209
-
IRES-driven translation is stimulated separately by the FMDV 3′-NCR and poly(A) sequences
-
Lopez de Quinto S., Saiz M., de la Morena D., Sobrino F., Martinez-Salas E., IRES-driven translation is stimulated separately by the FMDV 3′-NCR and poly(A) sequences Nucleic Acids Research 2002 30 4398 4405 (Pubitemid 35277250)
-
(2002)
Nucleic Acids Research
, vol.30
, Issue.20
, pp. 4398-4405
-
-
Lopez De Quinto, S.1
Saiz, M.2
De La Morena, D.3
Sobrino, F.4
Martinez-Salas, E.5
-
131
-
-
0344303621
-
Activity of a type 1 picornavirus internal ribosomal entry site is determined by sequences within the 3′ nontranslated region
-
DOI 10.1073/pnas.2436464100
-
Dobrikova E., Florez P., Bradrick S., Gromeier M., Activity of a type 1 picornavirus internal ribosomal entry site is determined by sequences within the 3′ nontranslated region Proceedings of the National Academy of Sciences of the United States of America 2003 100 25 15125 15130 (Pubitemid 37518027)
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, Issue.25
, pp. 15125-15130
-
-
Dobrikova, E.1
Florez, P.2
Bradrick, S.3
Gromeier, M.4
-
132
-
-
0035170571
-
Deletion or substitution of the aphthovirus 3′ NCR abrogates infectivity and virus replication
-
Saiz M., Gomez S., Martinez-Salas E., Sobrino F., Deletion or substitution of the aphthovirus 3′ NCR abrogates infectivity and virus replication Journal of General Virology 2001 82 93 101 (Pubitemid 32045799)
-
(2001)
Journal of General Virology
, vol.82
, Issue.1
, pp. 93-101
-
-
Saiz, M.1
Gomez, S.2
Martinez-Salas, E.3
Sobrino, F.4
-
133
-
-
67651002928
-
IGF2BP1 enhances HCV IRES-mediated translation initiation via the 3′UTR
-
Weinlich S., Httelmaier S., Schierhorn A., Behrens S. E., Ostareck-Lederer A., Ostareck D. H., IGF2BP1 enhances HCV IRES-mediated translation initiation via the 3′UTR RNA 2009 15 8 1528 1542
-
(2009)
RNA
, vol.15
, Issue.8
, pp. 1528-1542
-
-
Weinlich, S.1
Httelmaier, S.2
Schierhorn, A.3
Behrens, S.E.4
Ostareck-Lederer, A.5
Ostareck, D.H.6
-
135
-
-
55849150550
-
Riboproteomic analysis of polypeptides interacting with the internal ribosome-entry site element of foot-and-mouth disease viral RNA
-
Pacheco A., Reigadas S., Martnez-Salas E., Riboproteomic analysis of polypeptides interacting with the internal ribosome-entry site element of foot-and-mouth disease viral RNA Proteomics 2008 8 22 4782 4790
-
(2008)
Proteomics
, vol.8
, Issue.22
, pp. 4782-4790
-
-
Pacheco, A.1
Reigadas, S.2
Martnez-Salas, E.3
-
136
-
-
17844382455
-
Proteomic analysis of reaper 5′ untranslated region-interacting factors isolated by tobramycin affinity-selection reveals a role for La antigen in reaper mRNA translation
-
DOI 10.1002/pmic.200401045
-
Vazquez-Pianzola P., Urlaub H., Rivera-Pomar R., Proteomic analysis of reaper 5′ untranslated region-interacting factors isolated by tobramycin affinity-selection reveals a role for La antigen in reaper mRNA translation Proteomics 2005 5 6 1645 1655 (Pubitemid 40593271)
-
(2005)
Proteomics
, vol.5
, Issue.6
, pp. 1645-1655
-
-
Vazquez-Pianzola, P.1
Urlaub, H.2
Rivera-Pomar, R.3
-
137
-
-
0025146035
-
Cap-independent translation of encephalomyocarditis virus RNA: Structural elements of the internal ribosomal entry site and involvement of a cellular 57-kD RNA-binding protein
-
Jang S. K., Wimmer E., Cap-independent translation of encephalomyocarditis virus RNA: structural elements of the internal ribosomal entry site and involvement of a cellular 57-kD RNA-binding protein Genes and Development 1990 4 9 1560 1572
-
(1990)
Genes and Development
, vol.4
, Issue.9
, pp. 1560-1572
-
-
Jang, S.K.1
Wimmer, E.2
-
138
-
-
33846505055
-
A nucleo-cytoplasmic SR protein functions in viral IRES-mediated translation initiation
-
DOI 10.1038/sj.emboj.7601494, PII 7601494
-
Bedard K. M., Daijogo S., Semler B. L., A nucleo-cytoplasmic SR protein functions in viral IRES-mediated translation initiation The EMBO Journal 2007 26 2 459 467 (Pubitemid 46160946)
-
(2007)
EMBO Journal
, vol.26
, Issue.2
, pp. 459-467
-
-
Bedard, K.M.1
Daijogo, S.2
Semler, B.L.3
-
139
-
-
58549088736
-
Far upstream element binding protein 2 interacts with enterovirus 71 internal ribosomal entry site and negatively regulates viral translation
-
Lin J. Y., Li M. L., Shih S. R., Far upstream element binding protein 2 interacts with enterovirus 71 internal ribosomal entry site and negatively regulates viral translation Nucleic Acids Research 2009 37 1 47 59
-
(2009)
Nucleic Acids Research
, vol.37
, Issue.1
, pp. 47-59
-
-
Lin, J.Y.1
Li, M.L.2
Shih, S.R.3
-
140
-
-
59649126267
-
A novel role for Gemin5 in mRNA translation
-
Pacheco A., Lopez de Quinto S., Ramajo J., Fernandez N., Martinez-Salas E., A novel role for Gemin5 in mRNA translation Nucleic Acids Research 2009 37 582 590
-
(2009)
Nucleic Acids Research
, vol.37
, pp. 582-590
-
-
Pacheco, A.1
Lopez De Quinto, S.2
Ramajo, J.3
Fernandez, N.4
Martinez-Salas, E.5
-
141
-
-
22444444478
-
Mass spectrometric analysis of the human 40S ribosomal subunit: Native and HCV IRES-bound complexes
-
DOI 10.1110/ps.041293005
-
Yu Y., Ji H., Doudna J. A., Leary J. A., Mass spectrometric analysis of the human 40S ribosomal subunit: native and HCV IRES-bound complexes Protein Science 2005 14 6 1438 1446 (Pubitemid 41007909)
-
(2005)
Protein Science
, vol.14
, Issue.6
, pp. 1438-1446
-
-
Yu, Y.1
Ji, H.2
Doudna, J.A.3
Leary, J.A.4
-
142
-
-
70349193390
-
Identification of gemin5 as a novel 7-methylguanosine cap-binding protein
-
ARTICLE E7030
-
Bradrick S. S., Gromeier M., Identification of gemin5 as a novel 7-methylguanosine cap-binding protein PLoS ONE 2009 4 9, article e7030
-
(2009)
PLoS ONE
, vol.4
, Issue.9
-
-
Bradrick, S.S.1
Gromeier, M.2
-
143
-
-
79957525576
-
Translational regulation of HIV-1 replication by HIV-1 Rev cellular
-
Liu J., Henao-Mejia J., Liu H., Zhao Y., He J. J., Translational regulation of HIV-1 replication by HIV-1 Rev cellular cofactors Sam68, eIF5A, hRIP, and DDX3 Journal of NeuroImmune Pharmacology 2011 6 308 321
-
(2011)
Journal of NeuroImmune Pharmacology
, vol.6
, pp. 308-321
-
-
Liu, J.1
Henao-Mejia, J.2
Liu, H.3
Zhao, Y.4
He, J.J.5
-
144
-
-
79961063578
-
Preference of IRES-mediated initiation of translation during hibernation in golden-mantled ground squirrels, Spermophilus lateralis
-
Pan P., van Breukelen F., Preference of IRES-mediated initiation of translation during hibernation in golden-mantled ground squirrels, Spermophilus lateralis American Journal of Physiology 2011 301 R370 R377
-
(2011)
American Journal of Physiology
, vol.301
-
-
Pan, P.1
Van Breukelen, F.2
-
145
-
-
33746461295
-
Polypyrimidine Tract Binding Protein Regulates IRES-Mediated Gene Expression during Apoptosis
-
DOI 10.1016/j.molcel.2006.06.012, PII S1097276506004278
-
Bushell M., Stoneley M., Kong Y. W., Hamilton T. L., Spriggs K. A., Dobbyn H. C., Qin X., Sarnow P., Willis A. E., Polypyrimidine tract binding protein regulates IRES-mediated gene expression during apoptosis Molecular Cell 2006 23 3 401 412 (Pubitemid 44128848)
-
(2006)
Molecular Cell
, vol.23
, Issue.3
, pp. 401-412
-
-
Bushell, M.1
Stoneley, M.2
Kong, Y.W.3
Hamilton, T.L.4
Spriggs, K.A.5
Dobbyn, H.C.6
Qin, X.7
Sarnow, P.8
Willis, A.E.9
-
146
-
-
76549116230
-
Strong eukaryotic IRESs have weak secondary structure
-
ARTICLE E4136
-
Xia X., Holcik M., Strong eukaryotic IRESs have weak secondary structure PLoS ONE 2009 4 1, article e4136
-
(2009)
PLoS ONE
, vol.4
, Issue.1
-
-
Xia, X.1
Holcik, M.2
-
147
-
-
39149090651
-
Regulation of BAG-1 IRES-mediated translation following chemotoxic stress
-
DOI 10.1038/sj.onc.1210723, PII 1210723
-
Dobbyn H. C., Hill K., Hamilton T. L., Spriggs K. A., Pickering B. M., Coldwell M. J., de Moor C. H., Bushell M., Willis A. E., Regulation of BAG-1 IRES-mediated translation following chemotoxic stress Oncogene 2008 27 8 1167 1174 (Pubitemid 351253186)
-
(2008)
Oncogene
, vol.27
, Issue.8
, pp. 1167-1174
-
-
Dobbyn, H.C.1
Hill, K.2
Hamilton, T.L.3
Spriggs, K.A.4
Pickering, B.M.5
Coldwell, M.J.6
De Moor, C.H.7
Bushell, M.8
Willis, A.E.9
-
148
-
-
33846213631
-
A role for hnRNP C1/C2 and Unr in internal initiation of translation during mitosis
-
DOI 10.1038/sj.emboj.7601468, PII 7601468
-
Schepens B., Tinton S. A., Bruynooghe Y., Parthoens E., Haegman M., Beyaert R., Cornelis S., A role for hnRNP C1/C2 and Unr in internal initiation of translation during mitosis The EMBO Journal 2007 26 1 158 169 (Pubitemid 46094708)
-
(2007)
EMBO Journal
, vol.26
, Issue.1
, pp. 158-169
-
-
Schepens, B.1
Tinton, S.A.2
Bruynooghe, Y.3
Parthoens, E.4
Haegman, M.5
Beyaert, R.6
Cornelis, S.7
-
149
-
-
84863012578
-
Rhythmic interaction between period1 mRNA and hnRNP Q leads to circadian time-dependent translation
-
Lee K. H., Woo K. C., Kim D. Y., Rhythmic interaction between period1 mRNA and hnRNP Q leads to circadian time-dependent translation Molecular and Cellular Biology 2012 32 717 728
-
(2012)
Molecular and Cellular Biology
, vol.32
, pp. 717-728
-
-
Lee, K.H.1
Woo, K.C.2
Kim, D.Y.3
-
150
-
-
33744955344
-
Internal ribosome entry site-mediated translation of Apaf-1, but not XIAP, is regulated during UV-induced cell death
-
DOI 10.1074/jbc.M511319200
-
Ungureanu N. H., Cloutier M., Lewis S. M., de Silva N., Blais J. D., Bell J. C., Holcik M., Internal ribosome entry site-mediated translation of Apaf-1, but not XIAP, is regulated during UV-induced cell death The Journal of Biological Chemistry 2006 281 22 15155 15163 (Pubitemid 43855105)
-
(2006)
Journal of Biological Chemistry
, vol.281
, Issue.22
, pp. 15155-15163
-
-
Ungureanu, N.H.1
Cloutier, M.2
Lewis, S.M.3
De Silva, N.4
Blais, J.D.5
Bell, J.C.6
Holcik, M.7
-
151
-
-
37049030005
-
Cytoplasmic relocalization of heterogeneous nuclear ribonucleoprotein A1 controls translation initiation of specific mRNAs
-
DOI 10.1091/mbc.E07-06-0603
-
Cammas A., Pileur F., Bonnal S., Lewis S. M., Lévque N., Holcik M., Vagner S., Cytoplasmic relocalization of heterogeneous nuclear ribonucleoprotein A1 controls translation initiation of specific mRNAs Molecular Biology of the Cell 2007 18 12 5048 5059 (Pubitemid 350246704)
-
(2007)
Molecular Biology of the Cell
, vol.18
, Issue.12
, pp. 5048-5059
-
-
Cammas, A.1
Pileur, F.2
Bonnal, S.3
Lewis, S.M.4
Leveque, N.5
Holcik, M.6
Vagner, S.7
-
152
-
-
38349167513
-
The eIF4G homolog DAP5/p97 supports the translation of select mRNAs during endoplasmic reticulum stress
-
Lewis S. M., Cerquozzi S., Graber T. E., Ungureanu N. H., Andrews M., Holcik M., The eIF4G homolog DAP5/p97 supports the translation of select mRNAs during endoplasmic reticulum stress Nucleic Acids Research 2008 36 1 168 178
-
(2008)
Nucleic Acids Research
, vol.36
, Issue.1
, pp. 168-178
-
-
Lewis, S.M.1
Cerquozzi, S.2
Graber, T.E.3
Ungureanu, N.H.4
Andrews, M.5
Holcik, M.6
-
153
-
-
77957322887
-
ZNF9 activation of IRES-mediated translation of the human ODC mRNA is decreased in myotonic dystrophy type 2
-
ARTICLE E9301
-
Sammons M. A., Antons A. K., Bendjennat M., Udd B., Krahe R., Link A. J., ZNF9 activation of IRES-mediated translation of the human ODC mRNA is decreased in myotonic dystrophy type 2 PLoS ONE 2010 5 2, article e9301
-
(2010)
PLoS ONE
, vol.5
, Issue.2
-
-
Sammons, M.A.1
Antons, A.K.2
Bendjennat, M.3
Udd, B.4
Krahe, R.5
Link, A.J.6
-
154
-
-
77953122619
-
Deregulation of oncogene-induced senescence and p53 translational control in X-linked dyskeratosis congenita
-
Bellodi C., Kopmar N., Ruggero D., Deregulation of oncogene-induced senescence and p53 translational control in X-linked dyskeratosis congenita The EMBO Journal 2010 29 11 1865 1876
-
(2010)
The EMBO Journal
, vol.29
, Issue.11
, pp. 1865-1876
-
-
Bellodi, C.1
Kopmar, N.2
Ruggero, D.3
|