MetaMapp: mapping and visualizing metabolomic data by integrating information from biochemical pathways and chemical and mass spectral similarity

BMC Bioinformatics

Volumn 13, Issue 1, 2012, Pages

  Barupal, Dinesh K ^a   Haldiya, Pradeep K ^a   Wohlgemuth, Gert ^a   Kind, Tobias ^a   Kothari, Shanker L ^b   Pinkerton, Kent E ^a   Fiehn, Oliver ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF RAJASTHAN   (India)

Author keywords

Enzymatic pathways; Lung surfactants; Metabolic networks; Perinatal lung development

Indexed keywords

AIR CONTROL; BIOCHEMICAL CHANGES; BIOCHEMICAL PATHWAY; CELL DIVISIONS; CHEMICAL RELATIONSHIPS; ENERGY METABOLISM; ENVIRONMENTAL TOBACCO SMOKES; ENZYMATIC PATHWAYS; ENZYMATIC REACTION; EXPOSED TO; FETAL LUNGS; IN NETWORKS; INTEGRATING INFORMATION; LUNG DEVELOPMENT; LUNG SURFACTANTS; MASS SPECTRAL; MATERNAL BLOODS; METABOLIC NETWORK; METABOLIC PATHWAYS; METABOLOMICS; NETWORK GRAPH; NETWORK VISUALIZATION; NON-TARGETED; ON CURRENTS; PREGNANT RAT; STRUCTURAL PROTEINS; TIME OF FLIGHT MASS SPECTROMETRY;

ANIMALS; BIOLOGICAL ORGANS; BIOMOLECULES; CELL PROLIFERATION; DATA INTEGRATION; DATA PROCESSING; GAS CHROMATOGRAPHY; MASS SPECTROMETRY; METABOLITES; PHOTOMAPPING; PULMONARY DISEASES; RATS; VISUALIZATION;

METABOLISM;

ANIMALIA; NICOTIANA TABACUM; RATTUS;

ANIMAL; ARTICLE; CHEMICAL DATABASE; ENVIRONMENTAL EXPOSURE; FEMALE; GENOME; LUNG; MASS FRAGMENTOGRAPHY; METABOLISM; METABOLOME; METABOLOMICS; METHODOLOGY; PASSIVE SMOKING; PREGNANCY; PRENATAL DEVELOPMENT; RAT; SPRAGUE DAWLEY RAT;

ANIMALS; DATABASES, CHEMICAL; FEMALE; GAS CHROMATOGRAPHY-MASS SPECTROMETRY; GENOME; LUNG; MATERNAL EXPOSURE; METABOLIC NETWORKS AND PATHWAYS; METABOLOME; METABOLOMICS; PREGNANCY; RATS; RATS, SPRAGUE-DAWLEY; TOBACCO SMOKE POLLUTION;

EID: 84861002231     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-13-99     Document Type: Article

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