-
1
-
-
3242739284
-
Reconstitution of a minimal mtDNA replisome in vitro
-
DOI 10.1038/sj.emboj.7600257
-
Korhonen, J. A., Pham, X. H., Pellegrini, M., and Falkenberg, M. (2004) Reconstitution of a minimal mtDNA replisome in vitro. EMBO J. 23, 2423-2429 (Pubitemid 38954849)
-
(2004)
EMBO Journal
, vol.23
, Issue.12
, pp. 2423-2429
-
-
Korhonen, J.A.1
Pham, X.H.2
Pellegrini, M.3
Falkenberg, M.4
-
2
-
-
0034938364
-
Human mitochondrial DNA deletions associated with mutations in the gene encoding Twinkle, a phage T7 gene 4-like protein localized in mitochondria
-
DOI 10.1038/90058
-
Spelbrink, J. N., Li, F. Y., Tiranti, V., Nikali, K., Yuan, Q. P., Tariq, M., Wanrooij, S., Garrido, N., Comi, G., Morandi, L., Santoro, L., Toscano, A., Fabrizi, G. M., Somer, H., Croxen, R., Beeson, D., Poulton, J., Suomalainen, A., Jacobs, H. T., Zeviani, M., and Larsson, C. (2001) Human mitochondrial DNA deletions associated with mutations in the gene encoding Twinkle, a phage T7 gene 4-like protein localized in mitochondria. Nat. Genet. 28, 223-231 (Pubitemid 32626024)
-
(2001)
Nature Genetics
, vol.28
, Issue.3
, pp. 223-231
-
-
Spelbrink, J.N.1
Li, F.-Y.2
Tiranti, V.3
Nikali, K.4
Yuan, Q.-P.5
Tariq, M.6
Wanrooij, S.7
Garrido, N.8
Comi, G.9
Morandi, L.10
Santoro, L.11
Toscano, A.12
Fabrizi, G.-M.13
Somer, H.14
Croxen, R.15
Beeson, D.16
Poulton, J.17
Suomalainen, A.18
Jacobs, H.T.19
Zeviani, M.20
Larsson, C.21
more..
-
3
-
-
40849097478
-
Structure-function defects of the TWINKLE linker region in progressive external ophthalmoplegia
-
Korhonen, J. A., Pande, V., Holmlund, T., Farge, G., Pham, X. H., Nilsson, L., and Falkenberg, M. (2008) Structure-function defects of the TWINKLE linker region in progressive external ophthalmoplegia. J. Mol. Biol. 377, 691-705
-
(2008)
J. Mol. Biol.
, vol.377
, pp. 691-705
-
-
Korhonen, J.A.1
Pande, V.2
Holmlund, T.3
Farge, G.4
Pham, X.H.5
Nilsson, L.6
Falkenberg, M.7
-
4
-
-
0033786801
-
Structure and function of hexameric helicases
-
Patel, S. S., and Picha, K. M. (2000) Structure and function of hexameric helicases. Annu. Rev. Biochem. 69, 651-697
-
(2000)
Annu. Rev. Biochem.
, vol.69
, pp. 651-697
-
-
Patel, S.S.1
Picha, K.M.2
-
5
-
-
33947101328
-
Modular Architecture of the Hexameric Human Mitochondrial DNA Helicase
-
DOI 10.1016/j.jmb.2007.01.079, PII S0022283607001568
-
Ziebarth, T. D., Farr, C. L., and Kaguni, L. S. (2007) Modular architecture of the hexameric human mitochondrial DNA helicase. J. Mol. Biol. 367, 1382-1391 (Pubitemid 46413277)
-
(2007)
Journal of Molecular Biology
, vol.367
, Issue.5
, pp. 1382-1391
-
-
Ziebarth, T.D.1
Farr, C.L.2
Kaguni, L.S.3
-
6
-
-
58749095989
-
Structure-function defects of the TWINKLE N-terminal region in progressive external ophthalmoplegia
-
Holmlund, T., Farge, G., Pande, V., Korhonen, J., Nilsson, L., and Falkenberg, M. (2009) Structure-function defects of the TWINKLE N-terminal region in progressive external ophthalmoplegia. Biochim. Biophys. Acta 1792, 132-139
-
(2009)
Biochim. Biophys. Acta
, vol.1792
, pp. 132-139
-
-
Holmlund, T.1
Farge, G.2
Pande, V.3
Korhonen, J.4
Nilsson, L.5
Falkenberg, M.6
-
7
-
-
33847349331
-
The accessory subunit B of DNA polymerase γ is required for mitochondrial replisome function
-
DOI 10.1093/nar/gkl1116
-
Farge, G., Pham, X. H., Holmlund, T., Khorostov, I., and Falkenberg, M. (2007) The accessory subunit B of DNA polymerase γ is required for mitochondrial replisome function. Nucleic Acids Res. 35, 902-911 (Pubitemid 46344716)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.3
, pp. 902-911
-
-
Farge, G.1
Pham, X.H.2
Holmlund, T.3
Khorostov, I.4
Falkenberg, M.5
-
8
-
-
77951999476
-
Dynamic effects of cofactors and DNA on the oligomeric state of human mitochondrial DNA helicase
-
Ziebarth, T. D., Gonzalez-Soltero, R., Makowska-Grzyska, M. M., Núñez-Ramírez, R., Carazo, J. M., and Kaguni, L. S. (2010) Dynamic effects of cofactors and DNA on the oligomeric state of human mitochondrial DNA helicase. J. Biol. Chem. 285, 14639-14647
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 14639-14647
-
-
Ziebarth, T.D.1
Gonzalez-Soltero, R.2
Makowska-Grzyska, M.M.3
Núñez-Ramírez, R.4
Carazo, J.M.5
Kaguni, L.S.6
-
9
-
-
70349170314
-
Clinical and molecular aspects of diseases of mitochondrial DNA instability
-
Mao, C. C., and Holt, I. J. (2009) Clinical and molecular aspects of diseases of mitochondrial DNA instability. Chang Gung Med. J. 32, 354-369
-
(2009)
Chang Gung Med. J.
, vol.32
, pp. 354-369
-
-
Mao, C.C.1
Holt, I.J.2
-
10
-
-
77953811054
-
The human mitochondrial replication fork in health and disease
-
Wanrooij, S., and Falkenberg, M. (2010) The human mitochondrial replication fork in health and disease. Biochim. Biophys. Acta 1797, 1378-1388
-
(2010)
Biochim. Biophys. Acta
, vol.1797
, pp. 1378-1388
-
-
Wanrooij, S.1
Falkenberg, M.2
-
11
-
-
58149163606
-
Twinkle mutations associated with autosomal dominant progressive external ophthalmoplegia lead to impaired helicase function and in vivo mtDNA replication stalling
-
Goffart, S., Cooper, H. M., Tyynismaa, H., Wanrooij, S., Suomalainen, A., and Spelbrink, J. N. (2009) Twinkle mutations associated with autosomal dominant progressive external ophthalmoplegia lead to impaired helicase function and in vivo mtDNA replication stalling. Hum. Mol. Genet. 18, 328-340
-
(2009)
Hum. Mol. Genet.
, vol.18
, pp. 328-340
-
-
Goffart, S.1
Cooper, H.M.2
Tyynismaa, H.3
Wanrooij, S.4
Suomalainen, A.5
Spelbrink, J.N.6
-
12
-
-
53049089197
-
Physiological and biochemical defects in C-terminal mutants of mitochondrial DNA helicase
-
Matsushima, Y., Farr, C. L., Fan, L., and Kaguni, L. S. (2008) Physiological and biochemical defects in C-terminal mutants of mitochondrial DNA helicase. J. Biol. Chem. 283, 23964-23971
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 23964-23971
-
-
Matsushima, Y.1
Farr, C.L.2
Fan, L.3
Kaguni, L.S.4
-
13
-
-
34250868951
-
Expression of catalytic mutants of the mtDNA helicase Twinkle and polymerase POLG causes distinct replication stalling phenotypes
-
DOI 10.1093/nar/gkm215
-
Wanrooij, S., Goffart, S., Pohjoismäki, J. L., Yasukawa, T., and Spelbrink, J. N. (2007) Expression of catalytic mutants of the mtDNA helicase Twinkle and polymerase POLG causes distinct replication stalling phenotypes. Nucleic Acids Res. 35, 3238-3251 (Pubitemid 47073590)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.10
, pp. 3238-3251
-
-
Wanrooij, S.1
Goffart, S.2
Pohjoismaki, J.L.O.3
Yasukawa, T.4
Spelbrink, J.N.5
-
14
-
-
0026033193
-
Presteady-state kinetic analysis of processive DNA replication, including complete characterization of an exonuclease-deficient mutant
-
Patel, S. S., Wong, I., and Johnson, K. A. (1991) Presteady-state kinetic analysis of processive DNA replication, including complete characterization of an exonuclease-deficient mutant. Biochemistry 30, 511-525
-
(1991)
Biochemistry
, vol.30
, pp. 511-525
-
-
Patel, S.S.1
Wong, I.2
Johnson, K.A.3
-
15
-
-
0026651756
-
Large scale purification and biochemical characterization of T7 primase/ helicase proteins. Evidence for homodimer and heterodimer formation
-
Patel, S. S., Rosenberg, A. H., Studier, F. W., and Johnson, K. A. (1992) Large scale purification and biochemical characterization of T7 primase/ helicase proteins. Evidence for homodimer and heterodimer formation. J. Biol. Chem. 267, 15013-15021
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 15013-15021
-
-
Patel, S.S.1
Rosenberg, A.H.2
Studier, F.W.3
Johnson, K.A.4
-
16
-
-
33645910849
-
T7 RNA polymerase-induced bending of promoter DNA is coupled to DNA opening
-
Tang, G. Q., and Patel, S. S. (2006) T7 RNA polymerase-induced bending of promoter DNA is coupled to DNA opening. Biochemistry 45, 4936-4946
-
(2006)
Biochemistry
, vol.45
, pp. 4936-4946
-
-
Tang, G.Q.1
Patel, S.S.2
-
17
-
-
77956912166
-
Disease variants of the human mitochondrial DNA helicase encoded by C10orf2 differentially alter protein stability, nucleotide hydrolysis, and helicase activity
-
Longley, M. J., Humble, M. M., Sharief, F. S., and Copeland, W. C. (2010) Disease variants of the human mitochondrial DNA helicase encoded by C10orf2 differentially alter protein stability, nucleotide hydrolysis, and helicase activity. J. Biol. Chem. 285, 29690-29702
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 29690-29702
-
-
Longley, M.J.1
Humble, M.M.2
Sharief, F.S.3
Copeland, W.C.4
-
18
-
-
0016207811
-
Cell envelope and shape of Escherichia coli K12. Cross-linking with dimethyl imidoesters of the whole cell wall
-
Haller, I., and Henning, U. (1974) Cell envelope and shape of Escherichia coli K12. Cross-linking with dimethyl imidoesters of the whole cell wall. Proc. Natl. Acad. Sci. U.S.A. 71, 2018-2021
-
(1974)
Proc. Natl. Acad. Sci. U.S.A.
, vol.71
, pp. 2018-2021
-
-
Haller, I.1
Henning, U.2
-
19
-
-
0021990910
-
Nucleotide-dependent binding of the gene 4 protein of bacteriophage T7 to single-stranded DNA
-
Matson, S. W., and Richardson, C. C. (1985) Nucleotide-dependent binding of the gene 4 protein of bacteriophage T7 to single-stranded DNA. J. Biol. Chem. 260, 2281-2287 (Pubitemid 15105729)
-
(1985)
Journal of Biological Chemistry
, vol.260
, Issue.4
, pp. 2281-2287
-
-
Matson, S.W.1
Richardson, C.C.2
-
20
-
-
0027373139
-
Interactions of bacteriophage T7 DNA primase/helicase protein with single- stranded and double-stranded DNAs
-
DOI 10.1021/bi00097a028
-
Hingorani, M. M., and Patel, S. S. (1993) Interactions of bacteriophage T7 DNA primase/helicase protein with single-stranded and double-stranded DNAs. Biochemistry 32, 12478-12487 (Pubitemid 23357971)
-
(1993)
Biochemistry
, vol.32
, Issue.46
, pp. 12478-12487
-
-
Hingorani, M.M.1
Patel, S.S.2
-
21
-
-
39149116732
-
The N-terminal domain of TWINKLE contributes to single-stranded DNA binding and DNA helicase activities
-
DOI 10.1093/nar/gkm1025
-
Farge, G., Holmlund, T., Khvorostova, J., Rofougaran, R., Hofer, A., and Falkenberg, M. (2008) The N-terminal domain of TWINKLE contributes to single-stranded DNA binding and DNA helicase activities. Nucleic Acids Res. 36, 393-403 (Pubitemid 351250432)
-
(2008)
Nucleic Acids Research
, vol.36
, Issue.2
, pp. 393-403
-
-
Farge, G.1
Holmlund, T.2
Khvorostova, J.3
Rofougaran, R.4
Hofer, A.5
Falkenberg, M.6
-
22
-
-
82255185604
-
The mitochondrial DNA helicase TWINKLE can assemble on a closed circular template and support initiation of DNA synthesis
-
Jemt, E., Farge, G., Bäckström, S., Holmlund, T., Gustafsson, C. M., and Falkenberg, M. (2011) The mitochondrial DNA helicase TWINKLE can assemble on a closed circular template and support initiation of DNA synthesis. Nucleic Acids Res. 39, 9238-9249
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 9238-9249
-
-
Jemt, E.1
Farge, G.2
Bäckström, S.3
Holmlund, T.4
Gustafsson, C.M.5
Falkenberg, M.6
-
23
-
-
0021071027
-
The gene 4 protein of bacteriophage T7. Characterization of helicase activity
-
Matson, S. W., Tabor, S., and Richardson, C. C. (1983) The gene 4 protein of bacteriophage T7. Characterization of helicase activity. J. Biol. Chem. 258, 14017-14024 (Pubitemid 14203812)
-
(1983)
Journal of Biological Chemistry
, vol.258
, Issue.22
, pp. 14017-14024
-
-
Matson, S.W.1
Tabor, S.2
Richardson, C.C.3
-
24
-
-
78149459202
-
Functional roles of the N- and C-terminal regions of the human mitochondrial single-stranded DNA-binding protein
-
Oliveira, M. T., and Kaguni, L. S. (2010) Functional roles of the N- and C-terminal regions of the human mitochondrial single-stranded DNA-binding protein. PloS ONE 5, e15379
-
(2010)
PloS ONE
, vol.5
-
-
Oliveira, M.T.1
Kaguni, L.S.2
-
25
-
-
79851477029
-
Single-stranded DNA-binding proteins unwind the newly synthesized double-stranded DNA of model miniforks
-
Delagoutte, E., Heneman-Masurel, A., and Baldacci, G. (2011) Single-stranded DNA-binding proteins unwind the newly synthesized double-stranded DNA of model miniforks. Biochemistry 50, 932-944
-
(2011)
Biochemistry
, vol.50
, pp. 932-944
-
-
Delagoutte, E.1
Heneman-Masurel, A.2
Baldacci, G.3
-
26
-
-
32644434270
-
Base-stacking and base-pairing contributions into thermal stability of the DNA double helix
-
DOI 10.1093/nar/gkj454
-
Yakovchuk, P., Protozanova, E., and Frank-Kamenetskii, M. D. (2006) Base-stacking and base-pairing contributions into thermal stability of the DNA double helix. Nucleic Acids Res. 34, 564-574 (Pubitemid 43240244)
-
(2006)
Nucleic Acids Research
, vol.34
, Issue.2
, pp. 564-574
-
-
Yakovchuk, P.1
Protozanova, E.2
Frank-Kamenetskii, M.D.3
-
27
-
-
47049104346
-
Branch migration enzyme as a Brownian ratchet
-
Rasnik, I., Jeong, Y. J., McKinney, S. A., Rajagopal, V., Patel, S. S., and Ha, T. (2008) Branch migration enzyme as a Brownian ratchet. EMBO J. 27, 1727-1735
-
(2008)
EMBO J.
, vol.27
, pp. 1727-1735
-
-
Rasnik, I.1
Jeong, Y.J.2
McKinney, S.A.3
Rajagopal, V.4
Patel, S.S.5
Ha, T.6
-
28
-
-
33749266161
-
Structural studies of the archaeal MCM complex in different functional states
-
DOI 10.1016/j.jsb.2006.04.001, PII S1047847706001298, AAA + Proteins
-
Costa, A., Pape, T., van Heel, M., Brick, P., Patwardhan, A., and Onesti, S. (2006) Structural studies of the archaeal MCM complex in different functional states. J. Struct. Biol. 156, 210-219 (Pubitemid 44486066)
-
(2006)
Journal of Structural Biology
, vol.156
, Issue.1
, pp. 210-219
-
-
Costa, A.1
Pape, T.2
Van Heel, M.3
Brick, P.4
Patwardhan, A.5
Onesti, S.6
-
29
-
-
33745678945
-
Oligomeric States of Bacteriophage T7 Gene 4 Primase/Helicase
-
DOI 10.1016/j.jmb.2006.05.037, PII S002228360600619X
-
Crampton, D. J., Ohi, M., Qimron, U., Walz, T., and Richardson, C. C. (2006) Oligomeric states of bacteriophage T7 gene 4 primase/helicase. J. Mol. Biol. 360, 667-677 (Pubitemid 43975114)
-
(2006)
Journal of Molecular Biology
, vol.360
, Issue.3
, pp. 667-677
-
-
Crampton, D.J.1
Ohi, M.2
Qimron, U.3
Walz, T.4
Richardson, C.C.5
-
30
-
-
0034600838
-
A ring-opening mechanism for DNA binding in the central channel of the T7 helicase-primase protein
-
Ahnert, P., Picha, K. M., and Patel, S. S. (2000) A ring-opening mechanism for DNA binding in the central channel of the T7 helicase-primase protein. EMBO J. 19, 3418-3427 (Pubitemid 30428219)
-
(2000)
EMBO Journal
, vol.19
, Issue.13
, pp. 3418-3427
-
-
Ahnert, P.1
Picha, K.M.2
Patel, S.S.3
-
31
-
-
0034732885
-
DNA binding in the central channel of bacteriophage T7 helicase-primase is a multistep process. Nucleotide hydrolysis is not required
-
DOI 10.1021/bi992857i
-
Picha, K. M., Ahnert, P., and Patel, S. S. (2000) DNA binding in the central channel of bacteriophage T7 helicase-primase is a multistep process. Nucleotide hydrolysis is not required. Biochemistry 39, 6401-6409 (Pubitemid 30347145)
-
(2000)
Biochemistry
, vol.39
, Issue.21
, pp. 6401-6409
-
-
Picha, K.M.1
Ahnert, P.2
Patel, S.S.3
-
32
-
-
0032538625
-
2+. The presence of dTTP is sufficient for hexamer formation and DNA binding
-
2+. The presence of dTTP is sufficient for hexamer formation and DNA binding. J. Biol. Chem. 273, 27315-27319
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 27315-27319
-
-
Picha, K.M.1
Patel, S.S.2
-
33
-
-
70549085855
-
Eukaryotic DNA replication control: Lock and load, then fire
-
Remus, D., and Diffley, J. F. (2009) Eukaryotic DNA replication control: lock and load, then fire. Curr. Opin. Cell Biol. 21, 771-777
-
(2009)
Curr. Opin. Cell Biol.
, vol.21
, pp. 771-777
-
-
Remus, D.1
Diffley, J.F.2
-
34
-
-
3543007196
-
Human RECQ51β, a protein with DNA helicase and strand-annealing activities in a single polypeptide
-
DOI 10.1038/sj.emboj.7600301
-
Garcia, P. L., Liu, Y., Jiricny, J., West, S. C., and Janscak, P. (2004) Human RECQ5β, a protein with DNA helicase and strand annealing activities in a single polypeptide. EMBO J. 23, 2882-2891 (Pubitemid 39013560)
-
(2004)
EMBO Journal
, vol.23
, Issue.14
, pp. 2882-2891
-
-
Garcia, P.L.1
Liu, Y.2
Jiricny, J.3
West, S.C.4
Janscak, P.5
-
35
-
-
62049085034
-
Dual DNA unwinding activities of the Rothmund-Thomson syndrome protein, RECQ4
-
Xu, X., and Liu, Y. (2009) Dual DNA unwinding activities of the Rothmund-Thomson syndrome protein, RECQ4. EMBO J. 28, 568-577
-
(2009)
EMBO J.
, vol.28
, pp. 568-577
-
-
Xu, X.1
Liu, Y.2
-
36
-
-
22444447945
-
The Bloom's syndrome helicase promotes the annealing of complementary single-stranded DNA
-
DOI 10.1093/nar/gki712
-
Cheok, C. F., Wu, L., Garcia, P. L., Janscak, P., and Hickson, I. D. (2005) The Bloom's syndrome helicase promotes the annealing of complementary single-stranded DNA. Nucleic Acids Res. 33, 3932-3941 (Pubitemid 41418561)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.12
, pp. 3932-3941
-
-
Cheok, C.F.1
Wu, L.2
Garcia, P.L.3
Janscak, P.4
Hickson, I.D.5
-
37
-
-
20744437108
-
RecQ family members combine strand pairing and unwinding activities to catalyze strand exchange
-
DOI 10.1074/jbc.M414130200
-
Machwe, A., Xiao, L., Groden, J., Matson, S. W., and Orren, D. K. (2005) RecQ family members combine strand pairing and unwinding activities to catalyze strand exchange. J. Biol. Chem. 280, 23397-23407 (Pubitemid 40853254)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.24
, pp. 23397-23407
-
-
Machwe, A.1
Xiao, L.2
Groden, J.3
Matson, S.W.4
Orren, D.K.5
-
38
-
-
69249158083
-
Human heart mitochondrial DNA is organized in complex catenated networks containing abundant four-way junctions and replication forks
-
Pohjoismäki, J. L., Goffart, S., Tyynismaa, H., Willcox, S., Ide, T., Kang, D., Suomalainen, A., Karhunen, P. J., Griffith, J. D., Holt, I. J., and Jacobs, H. T. (2009) Human heart mitochondrial DNA is organized in complex catenated networks containing abundant four-way junctions and replication forks. J. Biol. Chem. 284, 21446-21457
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 21446-21457
-
-
Pohjoismäki, J.L.1
Goffart, S.2
Tyynismaa, H.3
Willcox, S.4
Ide, T.5
Kang, D.6
Suomalainen, A.7
Karhunen, P.J.8
Griffith, J.D.9
Holt, I.J.10
Jacobs, H.T.11
|