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Volumn 90, Issue 4, 2012, Pages 327-335

Cortinarius parkeri, a new species from the Pacific Northwest of North America

Author keywords

Agaricales; Heterozygous; Leprocybe; Phylogeny; Vernal

Indexed keywords

GENETIC VARIATION; GENOME; HETEROZYGOSITY; INTRASPECIFIC VARIATION; MOLECULAR ANALYSIS; MORPHOLOGY; MUSHROOM; NEW SPECIES; PHYLOGENY; POLYMORPHISM; TAXONOMY;

EID: 84860154349     PISSN: 19162804     EISSN: None     Source Type: Journal    
DOI: 10.1139/B2012-003     Document Type: Article
Times cited : (7)

References (34)
  • 1
    • 38149106566 scopus 로고    scopus 로고
    • New Cortinarius species associated with Quercus and Comarostaphylis in Costa Rica
    • doi:10.1139/B07-067
    • Ammirati, J., Garnica, S., Halling, R.E., Mata, M., Mueller, G.M., and Carranza, J. 2007. New Cortinarius species associated with Quercus and Comarostaphylis in Costa Rica. Can. J. Bot. 85(9): 794-812. doi:10.1139/B07-067.
    • (2007) Can. J. Bot , vol.85 , Issue.9 , pp. 794-812
    • Ammirati, J.1    Garnica, S.2    Halling, R.E.3    Mata, M.4    Mueller, G.M.5    Carranza, J.6
  • 3
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • Edgar, R.C. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32: 1792-1797.http://www.ebi.ac.uk/Tools/msa/muscle/
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 4
    • 0003437302 scopus 로고    scopus 로고
    • Distributed by the author. Department of Genome Sciences, University of Washington, Seattle
    • Felsenstein, J. 2005. PHYLIP (Consense) version 3.6. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle.
    • (2005) PHYLIP (Consense) Version 3.6
    • Felsenstein, J.1
  • 5
    • 34249670666 scopus 로고    scopus 로고
    • Molecular phylogenetics and delimitation of species in Cortinarius, section Calochroi (Basidiomycota, Agaricales) in Europe
    • doi:10.1016/j.ympev.2006.11.013. PMID:17197201
    • Frøslev, T.G., Jeppesen, T.S., Læssoe, T., and Kjøller, R. 2007. Molecular phylogenetics and delimitation of species in Cortinarius, section Calochroi (Basidiomycota, Agaricales) in Europe. Mol. Phylogenet. Evol. 44(1): 217-227. doi:10.1016/j.ympev.2006.11.013. PMID:17197201.
    • (2007) Mol. Phylogenet. Evol , vol.44 , Issue.1 , pp. 217-227
    • Frøslev, T.G.1    Jeppesen, T.S.2    Læssoe, T.3    Kjøller, R.4
  • 6
    • 0027580147 scopus 로고
    • ITS primers with enhanced specificity for basidiomycetes-application to the identification of mycorrhizae and rusts
    • doi:10.1111/j.1365-294X.1993.tb0000,.x. PMID:8180733
    • Gardes, M., and Bruns, T.D. 1993. ITS primers with enhanced specificity for basidiomycetes-application to the identification of mycorrhizae and rusts. Mol. Ecol. 2(2): 113-118. doi:10.1111/j.1365-294X.1993.tb00005.x. PMID:8180733.
    • (1993) Mol. Ecol , vol.2 , Issue.2 , pp. 113-118
    • Gardes, M.1    Bruns, T.D.2
  • 7
    • 1342332060 scopus 로고    scopus 로고
    • Phylogenetic relationships of European Phlegmacium species (Cortinarius, Agaricales)
    • doi:10.2307/3761917. PMID:21149018
    • Garnica, S., Weiß, M., Oertel, B., and Oberwinkler, F. 2003. Phylogenetic relationships of European Phlegmacium species (Cortinarius, Agaricales). Mycologia, 95(6): 1155-1170. doi:10.2307/3761917. PMID:21149018.
    • (2003) Mycologia , vol.95 , Issue.6 , pp. 1155-1170
    • Garnica, S.1    Weiß, M.2    Oertel, B.3    Oberwinkler, F.4
  • 8
    • 33744780465 scopus 로고    scopus 로고
    • A framework for a phylogenetic classification in the genus Cortinarius (Basidomycota, Agaricales) derived from morphological and molecular data
    • doi:10.1139/b05-107
    • Garnica, S., Weiß, M., Oertel, B., and Oberwinkler, F. 2005. A framework for a phylogenetic classification in the genus Cortinarius (Basidomycota, Agaricales) derived from morphological and molecular data. Can. J. Bot. 83(11): 1457-1477. doi:10.1139/b05-107.
    • (2005) Can. J. Bot , vol.83 , Issue.11 , pp. 1457-1477
    • Garnica, S.1    Weiß, M.2    Oertel, B.3    Oberwinkler, F.4
  • 9
    • 61849157460 scopus 로고    scopus 로고
    • Phylogenetic relationships in Cortinarius, section Calochroi, inferred from nuclear DNA sequences
    • doi:10.1186/1471-2148-9-1. PMID:19121213
    • Garnica, S., Weiß, M., Oertel, B., Ammirati, J., and Oberwinkler, F. 2009. Phylogenetic relationships in Cortinarius, section Calochroi, inferred from nuclear DNA sequences. BMC Evol. Biol. 9(1): 1-17. doi:10.1186/1471-2148-9-1. PMID:19121213.
    • (2009) BMC Evol. Biol , vol.9 , Issue.1 , pp. 1-17
    • Garnica, S.1    Weiß, M.2    Oertel, B.3    Ammirati, J.4    Oberwinkler, F.5
  • 10
    • 79960560230 scopus 로고    scopus 로고
    • Tracking the evolutionary history of Cortinarius species in section Calochroi, with transoceanic disjunct distributions
    • doi:10.1186/1471-2148-11-213.PMID:21771336
    • Garnica, S., Spahn, P., Oertel, B., Ammirati, J., and Oberwinkler, F. 2011. Tracking the evolutionary history of Cortinarius species in section Calochroi, with transoceanic disjunct distributions. BMC Evol. Biol. 11(1): 213-231. doi:10.1186/1471-2148-11-213.PMID:21771336.
    • (2011) BMC Evol. Biol , vol.11 , Issue.1 , pp. 213-231
    • Garnica, S.1    Spahn, P.2    Oertel, B.3    Ammirati, J.4    Oberwinkler, F.5
  • 12
    • 0000630343 scopus 로고    scopus 로고
    • Cortinarius phylogeny and possible taxonomic implications of ITS rDNA sequences
    • doi:10.2307/3761427
    • Høiland, K., and Holst-Jensen, A. 2000. Cortinarius phylogeny and possible taxonomic implications of ITS rDNA sequences. Mycologia, 92(4): 694-710. doi:10.2307/3761427.
    • (2000) Mycologia , vol.92 , Issue.4 , pp. 694-710
    • Høiland, K.1    Holst-Jensen, A.2
  • 13
    • 20444415484 scopus 로고    scopus 로고
    • Bayesian analysis of molecular evolution using MrBayes
    • Edited by R. Nielsen. Springer-Verlag
    • Huelsenbeck, J.P., and Ronquist, R. 2005. Bayesian analysis of molecular evolution using MrBayes. In Statistical methods in molecular evolution. Edited by R. Nielsen. Springer-Verlag. pp. 183-232.
    • (2005) Statistical Methods In Molecular Evolution , pp. 183-232
    • Huelsenbeck, J.P.1    Ronquist, R.2
  • 14
    • 65549165942 scopus 로고    scopus 로고
    • Using heterozygosity to estimate a percentage DNA sequence similarity for environmental species' delimitation across basidiomycete fungi
    • doi:10.1111/j.1469-8137.2009.02802.x. PMID:19383108
    • Hughes, K.W., Petersen, R.H., and Lickey, E.B. 2009. Using heterozygosity to estimate a percentage DNA sequence similarity for environmental species' delimitation across basidiomycete fungi. New Phytol. 182(4): 795-798. doi:10.1111/j.1469-8137.2009.02802.x. PMID:19383108.
    • (2009) New Phytol , vol.182 , Issue.4 , pp. 795-798
    • Hughes, K.W.1    Petersen, R.H.2    Lickey, E.B.3
  • 15
    • 0038986244 scopus 로고
    • Cortinarius
    • Kauffman, C.H. 1932. Cortinarius. N. Am. Flora, 10(5): 282-348.
    • (1932) N. Am. Flora , vol.10 , Issue.5 , pp. 282-348
    • Kauffman, C.H.1
  • 17
    • 53849100757 scopus 로고    scopus 로고
    • Cortinarius lucorum (Fr.) Karst., a Populus associate from North America
    • doi:10.2509/pnwf.2006.001.004
    • Matheny, P.B., and Ammirati, J.F. 2006. Cortinarius lucorum (Fr.) Karst., a Populus associate from North America. Pacific Northwest Fungi, 1(4): 1-10. doi:10.2509/pnwf.2006.001.004.
    • (2006) Pacific Northwest Fungi , vol.1 , Issue.4 , pp. 1-10
    • Matheny, P.B.1    Ammirati, J.F.2
  • 19
    • 0004022938 scopus 로고
    • Roger Phillips, Gustav Fisher Verlag, Stuttgart
    • Moser, M. 1983. Keys to Agarics and Boleti. Roger Phillips, Gustav Fisher Verlag, Stuttgart.
    • (1983) Keys to Agarics and Boleti
    • Moser, M.1
  • 20
    • 0039924677 scopus 로고    scopus 로고
    • Studies in North American Cortinarii II. Interesting and new species collected in the North Cascade Mountains, Washington
    • Moser, M.M., and Ammirati, J.F. 1996. Studies in North American Cortinarii II. Interesting and new species collected in the North Cascade Mountains, Washington. Mycotaxon, 58: 387-412.
    • (1996) Mycotaxon , vol.58 , pp. 387-412
    • Moser, M.M.1    Ammirati, J.F.2
  • 21
    • 0031591554 scopus 로고    scopus 로고
    • Studies on North American Cortinarii IV. New and interesting Cortinarius species from oak forests in Northern California
    • Moser, M., and Ammirati, J. 1997. Studies on North American Cortinarii IV. New and interesting Cortinarius species from oak forests in Northern California. Sydowia, 49: 25-48.
    • (1997) Sydowia , vol.49 , pp. 25-48
    • Moser, M.1    Ammirati, J.2
  • 22
    • 59649105404 scopus 로고    scopus 로고
    • Cortinarius, sect. Brunnei (Basidiomycota, Agaricales) in North Europe
    • doi:10.1016/j.mycres.2008.10.006.PMID:19027854
    • Niskanen, T., Kytövuori, I., and Liimatainen, K. 2009. Cortinarius, sect. Brunnei (Basidiomycota, Agaricales) in North Europe. Mycol. Res. 113(2): 182-206. doi:10.1016/j.mycres.2008.10.006.PMID:19027854.
    • (2009) Mycol. Res , vol.113 , Issue.2 , pp. 182-206
    • Niskanen, T.1    Kytövuori, I.2    Liimatainen, K.3
  • 23
    • 6044244813 scopus 로고    scopus 로고
    • Towards a better understanding of the infrageneric relationships in Cortinarius(Agaricales, Basidiomycota)
    • doi:10.2307/3762088. PMID:21148925
    • Peintner, U., Moncalvo, J.-M., and Vilgalys, R. 2004. Towards a better understanding of the infrageneric relationships in Cortinarius(Agaricales, Basidiomycota). Mycologia, 96(5): 1042-1058.doi:10.2307/3762088. PMID:21148925.
    • (2004) Mycologia , vol.96 , Issue.5 , pp. 1042-1058
    • Peintner, U.1    Moncalvo, J.-M.2    Vilgalys, R.3
  • 24
    • 0031773680 scopus 로고    scopus 로고
    • Modeltest: Testing the model of DNA substitution
    • doi:10.1093/bioinformatics/14.9.817. PMID:9918953
    • Posada, D., and Crandall, K.A. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics, 14(9): 817-818 ttp://darwin.uvigo.es/software/modeltest.html. doi:10.1093/bioinformatics/14.9.817. PMID:9918953.
    • (1998) Bioinformatics , vol.14 , Issue.9 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 27
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylo genetic inference under mixed models
    • doi:10.1093/bioinformatics/btg180. PMID:12912839
    • Ronquist, F., and Huelsenbeck, J.P. 2003. MrBayes 3: Bayesian phylo genetic inference under mixed models. Bioinformatics, 19 (12): 1572-1574. doi:10.1093/bioinformatics/btg180. PMID:12912839.
    • (2003) Bioinformatics , vol.19 , Issue.12 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 29
    • 0002538177 scopus 로고
    • Studies in the genus Cortinarius I
    • 12plt
    • Smith, A.H. 1939. Studies in the genus Cortinarius I. Contrib. Univ. Mich. Herb. 2: 4-42. [12plt.]
    • (1939) Contrib. Univ. Mich. Herb , vol.2 , pp. 4-42
    • Smith, A.H.1
  • 30
    • 0038986234 scopus 로고
    • New and interesting Cortinarii from North America
    • Smith, A.H. 1944. New and interesting Cortinarii from North America. Lloydia, 7: 163-235.
    • (1944) Lloydia , vol.7 , pp. 163-235
    • Smith, A.H.1
  • 31
    • 70350573945 scopus 로고    scopus 로고
    • Study on Cortinarius subgenus Telamonia section Hydrocybe in Europe, with especial emphasis on Mediterranean taxa
    • doi:10.1016/j.mycres.2009.07.006. PMID:19616624
    • Suárez-Santiago, V.N., Ortega, A., Peintner, U., and López-Flores, I. 2009. Study on Cortinarius subgenus Telamonia section Hydrocybe in Europe, with especial emphasis on Mediterranean taxa. Mycol. Res. 113(10): 1070-1090. doi:10.1016/j.mycres.2009.07.006. PMID:19616624.
    • (2009) Mycol. Res , vol.113 , Issue.10 , pp. 1070-1090
    • Suárez-Santiago, V.N.1    Ortega, A.2    Peintner, U.3    López-Flores, I.4
  • 32
    • 0033228136 scopus 로고    scopus 로고
    • Community structure of ectomycorrhizal fungi in a Pinus muricata forest: Minimal overlap between the mature forest and resistant propagule communities
    • doi:10.1046/j.1365-294x.1999.00773.x. PMID:10620228
    • Taylor, D.L., and Bruns, T.D. 1999. Community structure of ectomycorrhizal fungi in a Pinus muricata forest: minimal overlap between the mature forest and resistant propagule communities. Mol. Ecol. 8(11): 1837-1850. doi:10.1046/j.1365-294x.1999.00773.x. PMID:10620228.
    • (1999) Mol. Ecol , vol.8 , Issue.11 , pp. 1837-1850
    • Taylor, D.L.1    Bruns, T.D.2
  • 33
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
    • Edited by M.A. Innis, D.H. Gelfand, J.J. Sninsky, and T.J. White. Academic Press, Inc., New York
    • White, T.J., Bruns, T.D., Lee, S., and Taylor, J.W. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In PCR protocols: a guide to methods and applications. Edited by M.A. Innis, D.H. Gelfand, J.J. Sninsky, and T.J. White. Academic Press, Inc., New York. pp. 315-322.
    • (1990) PCR Protocols: A Guide to Methods and Applications , pp. 315-322
    • White, T.J.1    Bruns, T.D.2    Lee, S.3    Taylor, J.W.4


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