A molecular view on signal transduction by the apoptosome

Cellular Signalling

Volumn 24, Issue 7, 2012, Pages 1420-1425

  Reubold, Thomas F ^a   Eschenburg, Susanne ^a  

^a HANNOVER MEDICAL SCHOOL   (Germany)

Author keywords

Apaf 1; Apoptosis; Apoptosome; Caspase activation

Indexed keywords

ADENOSINE TRIPHOSPHATE; APOPTOSOME; APOPTOTIC PROTEASE ACTIVATING FACTOR 1; CASPASE 9; CYTOCHROME C; DROSOPHILA INHIBITOR OF APOPTOSIS PROTEIN 1; DROSOPHILA PROTEIN; UNCLASSIFIED DRUG;

ENZYME ACTIVATION; ENZYME ACTIVITY; FLY; HUMAN; MOLECULAR DYNAMICS; NEMATODE; NONHUMAN; PRIORITY JOURNAL; PROTEIN EXPRESSION; PROTEIN FUNCTION; PROTEIN STRUCTURE; REVIEW; SIGNAL TRANSDUCTION;

ADENOSINE TRIPHOSPHATE; ANIMALS; APOPTOSIS; APOPTOSOMES; APOPTOTIC PROTEASE-ACTIVATING FACTOR 1; CASPASE 9; CYTOCHROMES C; MITOCHONDRIA; PROTEIN CONFORMATION; PROTEIN STRUCTURE, TERTIARY; SIGNAL TRANSDUCTION;

EID: 84859959656     PISSN: 08986568     EISSN: 18733913     Source Type: Journal    
DOI: 10.1016/j.cellsig.2012.03.007     Document Type: Review

References (98)

1. Taylor R.C., Cullen S.P., Martin S.J. Nature Reviews. Molecular Cell Biology 2008, 9(3):231-241.
2. Domingos P.M., Steller H. Current Opinion in Genetics & Development 2007, 17(4):294-299.
3. Twomey C., McCarthy J.V. Journal of Cellular and Molecular Medicine 2005, 9(2):345-359.
4. Opferman J.T. Cell Death and Differentiation 2008, 15(2):234-242.
5. Cotter T.G. Nature Reviews. Cancer 2009, 9(7):501-507.
6. Vermeulen K., Van Bockstaele D.R., Berneman Z.N. Annals of Hematology 2005, 84(10):627-639.
7. Ekshyyan O., Aw T.Y. Current Neurovascular Research 2004, 1(4):355-371.
8. Friedlander R.M. The New England Journal of Medicine 2003, 348(14):1365-1375.
9. de Almeida C.J., Linden R. Cellular and Molecular Life Sciences 2005, 62(14):1532-1546.
10. Mahmood Z., Shukla Y. Experimental Cell Research 2010, 316(6):887-899.
11. Roos W.P., Kaina B. Trends in Molecular Medicine 2006, 12(9):440-450.
12. Tait S.W., Green D.R. Nature Reviews. Molecular Cell Biology 2010, 11(9):621-632.
13. Kroemer G., Galluzzi L., Brenner C. Physiological Reviews 2007, 87(1):99-163.
14. Li P., Nijhawan D., Budihardjo I., Srinivasula S.M., Ahmad M., Alnemri E.S., Wang X. Cell 1997, 91(4):479-489.
15. Rodriguez J., Lazebnik Y. Genes & Development 1999, 13(24):3179-3184.
16. Tewari M., Quan L.T., O'Rourke K., Desnoyers S., Zeng Z., Beidler D.R., Poirier G.G., Salvesen G.S., Dixit V.M. Cell 1995, 81(5):801-809.
17. Nicholson D.W., Ali A., Thornberry N.A., Vaillancourt J.P., Ding C.K., Gallant M., Gareau Y., Griffin P.R., Labelle M., Lazebnik Y.A., et al. Nature 1995, 376(6535):37-43.
18. Duan H., Orth K., Chinnaiyan A.M., Poirier G.G., Froelich C.J., He W.W., Dixit V.M. The Journal of Biological Chemistry 1996, 271(28):16720-16724.
19. Liu X., Kim C.N., Yang J., Jemmerson R., Wang X. Cell 1996, 86(1):147-157.
20. Zou H., Henzel W.J., Liu X., Lutschg A., Wang X. Cell 1997, 90(3):405-413.
21. Yuan J., Horvitz H.R. Development 1992, 116(2):309-320.
22. Leipe D.D., Koonin E.V., Aravind L. Journal of Molecular Biology 2004, 343(1):1-28.
23. Erzberger J.P., Berger J.M. Annual Review of Biophysics and Biomolecular Structure 2006, 35:93-114.
24. Ammelburg M., Frickey T., Lupas A.N. Journal of Structural Biology 2006, 156(1):2-11.
25. Benedict M.A., Hu Y., Inohara N., Nunez G. The Journal of Biological Chemistry 2000, 275(12):8461-8468.
26. Park H.H., Lo Y.C., Lin S.C., Wang L., Yang J.K., Wu H. Annual Review of Immunology 2007, 25:561-586.
27. Qin H., Srinivasula S.M., Wu G., Fernandes-Alnemri T., Alnemri E.S., Shi Y. Nature 1999, 399(6736):549-557.
28. Riedl S.J., Li W., Chao Y., Schwarzenbacher R., Shi Y. Nature 2005, 434(7035):926-933.
29. Reubold T.F., Wohlgemuth S., Eschenburg S. Structure 2011, 19(8):1074-1083.
30. Yu X., Acehan D., Menetret J.F., Booth C.R., Ludtke S.J., Riedl S.J., Shi Y., Wang X., Akey C.W. Structure 2005, 13(11):1725-1735.
31. Yuan S., Yu X., Topf M., Ludtke S.J., Wang X., Akey C.W. Structure 2010, 18(5):571-583.
32. Saleh A., Srinivasula S.M., Acharya S., Fishel R., Alnemri E.S. The Journal of Biological Chemistry 1999, 274(25):17941-17945.
33. Purring-Koch C., McLendon G. Proceedings of the National Academy of Sciences of the United States of America 2000, 97(22):11928-11931.
34. Hu Y., Ding L., Spencer D.M., Nunez G. The Journal of Biological Chemistry 1998, 273(50):33489-33494.
35. Srinivasula S.M., Ahmad M., Fernandes-Alnemri T., Alnemri E.S. Molecular Cell 1998, 1(7):949-957.
36. Purring C., Zou H., Wang X., McLendon G. Journal of the American Chemical Society 1999, 121(32):7435-7436.
37. Riedl S.J., Salvesen G.S. Nature Reviews. Molecular Cell Biology 2007, 8(5):405-413.
38. Kim H.E., Du F., Fang M., Wang X. Proceedings of the National Academy of Sciences of the United States of America 2005, 102(49):17545-17550.
39. Bao Q., Lu W., Rabinowitz J.D., Shi Y. Molecular Cell 2007, 25(2):181-192.
40. Reubold T.F., Wohlgemuth S., Eschenburg S. The Journal of Biological Chemistry 2009, 284(47):32717-32724.
41. Jiang X., Wang X. The Journal of Biological Chemistry 2000, 275(40):31199-31203.
42. Hu Y., Benedict M.A., Ding L., Nunez G. The EMBO Journal 1999, 18(13):3586-3595.
43. Zou H., Li Y., Liu X., Wang X. The Journal of Biological Chemistry 1999, 274(17):11549-11556.
44. Lupas A.N., Martin J. Current Opinion in Structural Biology 2002, 12(6):746-753.
45. Snider J., Thibault G., Houry W.A. Genome Biology 2008, 9(4):216.
46. Hattendorf D.A., Lindquist S.L. The EMBO Journal 2002, 21(1-2):12-21.
47. Karata K., Inagawa T., Wilkinson A.J., Tatsuta T., Ogura T. The Journal of Biological Chemistry 1999, 274(37):26225-26232.
48. Steel G.J., Harley C., Boyd A., Morgan A. Molecular Biology of the Cell 2000, 11(4):1345-1356.
49. Danot O., Marquenet E., Vidal-Ingigliardi D., Richet E. Structure 2009, 17(2):172-182.
50. Proell M., Riedl S.J., Fritz J.H., Rojas A.M., Schwarzenbacher R. PLoS One 2008, 3(4):e2119.
51. Yan N., Chai J., Lee E.S., Gu L., Liu Q., He J., Wu J.W., Kokel D., Li H., Hao Q., Xue D., Shi Y. Nature 2005, 437(7060):831-837.
52. Qi S., Pang Y., Hu Q., Liu Q., Li H., Zhou Y., He T., Liang Q., Liu Y., Yuan X., Luo G., Wang J., Yan N., Shi Y. Cell 2010, 141(3):446-457.
53. Marquenet E., Richet E. Journal of Bacteriology 2010, 192(19):5181-5191.
54. van Ooijen G., Mayr G., Kasiem M.M., Albrecht M., Cornelissen B.J., Takken F.L. Journal of Experimental Botany 2008, 59(6):1383-1397.
55. Acehan D., Jiang X., Morgan D.G., Heuser J.E., Wang X., Akey C.W. Molecular Cell 2002, 9(2):423-432.
56. Diemand A.V., Lupas A.N. Journal of Structural Biology 2006, 156(1):230-243.
57. Li J., Yuan J. Oncogene 2008, 27(48):6194-6206.
58. Ho P.K., Hawkins C.J. The FEBS Journal 2005, 272(21):5436-5453.
59. Pop C., Salvesen G.S. The Journal of Biological Chemistry 2009, 284(33):21777-21781.
60. Srinivasula S.M., Hegde R., Saleh A., Datta P., Shiozaki E., Chai J., Lee R.A., Robbins P.D., Fernandes-Alnemri T., Shi Y., Alnemri E.S. Nature 2001, 410(6824):112-116.
61. Stennicke H.R., Deveraux Q.L., Humke E.W., Reed J.C., Dixit V.M., Salvesen G.S. The Journal of Biological Chemistry 1999, 274(13):8359-8362.
62. Boatright K.M., Renatus M., Scott F.L., Sperandio S., Shin H., Pedersen I.M., Ricci J.E., Edris W.A., Sutherlin D.P., Green D.R., Salvesen G.S. Molecular Cell 2003, 11(2):529-541.
63. Pop C., Timmer J., Sperandio S., Salvesen G.S. Molecular Cell 2006, 22(2):269-275.
64. Bao Q., Shi Y. Cell Death and Differentiation 2007, 14(1):56-65.
65. Chao Y., Shiozaki E.N., Srinivasula S.M., Rigotti D.J., Fairman R., Shi Y. PLoS Biology 2005, 3(6):e183.
66. Shi Y. Cell 2004, 117(7):855-858.
67. MacCorkle R.A., Freeman K.W., Spencer D.M. Proceedings of the National Academy of Sciences of the United States of America 1998, 95(7):3655-3660.
68. Muzio M., Stockwell B.R., Stennicke H.R., Salvesen G.S., Dixit V.M. The Journal of Biological Chemistry 1998, 273(5):2926-2930.
69. Yang X., Chang H.Y., Baltimore D. Molecular Cell 1998, 1(2):319-325.
70. Renatus M., Stennicke H.R., Scott F.L., Liddington R.C., Salvesen G.S. Proceedings of the National Academy of Sciences of the United States of America 2001, 98(25):14250-14255.
71. Salvesen G.S., Riedl S.J. Advances in Experimental Medicine and Biology 2008, 615:13-23.
72. Yuan S., Yu X., Asara J.M., Heuser J.E., Ludtke S.J., Akey C.W. Structure 2011, 19(8):1084-1096.
73. Yin Q., Park H.H., Chung J.Y., Lin S.C., Lo Y.C., da Graca L.S., Jiang X., Wu H. Molecular Cell 2006, 22(2):259-268.
74. Allan L.A., Morrice N., Brady S., Magee G., Pathak S., Clarke P.R. Nature Cell Biology 2003, 5(7):647-654.
75. Allan L.A., Clarke P.R. Molecular Cell 2007, 26(2):301-310.
76. Seifert A., Allan L.A., Clarke P.R. The FEBS Journal 2008, 275(24):6268-6280.
77. Kanuka H., Sawamoto K., Inohara N., Matsuno K., Okano H., Miura M. Molecular Cell 1999, 4(5):757-769.
78. Rodriguez A., Oliver H., Zou H., Chen P., Wang X., Abrams J.M. Nature Cell Biology 1999, 1(5):272-279.
79. Zhou L., Song Z., Tittel J., Steller H. Molecular Cell 1999, 4(5):745-755.
80. Yuan S., Yu X., Topf M., Dorstyn L., Kumar S., Ludtke S.J., Akey C.W. Structure 2011, 19(1):128-140.
81. Oberst A., Bender C., Green D.R. Cell Death and Differentiation 2008, 15(7):1139-1146.
82. Krieser R.J., White K. Apoptosis 2009, 14(8):961-968.
83. Arama E., Agapite J., Steller H. Developmental Cell 2003, 4(5):687-697.
84. Arama E., Bader M., Srivastava M., Bergmann A., Steller H. The EMBO Journal 2006, 25(1):232-243.
85. Mendes C.S., Arama E., Brown S., Scherr H., Srivastava M., Bergmann A., Steller H., Mollereau B. EMBO Reports 2006, 7(9):933-939.
86. Abdelwahid E., Yokokura T., Krieser R.J., Balasundaram S., Fowle W.H., White K. Developmental Cell 2007, 12(5):793-806.
87. Dorstyn L., Mills K., Lazebnik Y., Kumar S. The Journal of Cell Biology 2004, 167(3):405-410.
88. Dorstyn L., Read S., Cakouros D., Huh J.R., Hay B.A., Kumar S. The Journal of Cell Biology 2002, 156(6):1089-1098.
89. Means J.C., Muro I., Clem R.J. Cell Death and Differentiation 2006, 13(7):1222-1234.
90. Varkey J., Chen P., Jemmerson R., Abrams J.M. The Journal of Cell Biology 1999, 144(4):701-710.
91. Zimmermann K.C., Ricci J.E., Droin N.M., Green D.R. The Journal of Cell Biology 2002, 156(6):1077-1087.
92. Dorstyn L., Kumar S. Cell Death and Differentiation 2008, 15(3):461-470.
93. Yu X., Wang L., Acehan D., Wang X., Akey C.W. Journal of Molecular Biology 2006, 355(3):577-589.
94. Yan N., Huh J.R., Schirf V., Demeler B., Hay B.A., Shi Y. The Journal of Biological Chemistry 2006, 281(13):8667-8674.
95. Wilson R., Goyal L., Ditzel M., Zachariou A., Baker D.A., Agapite J., Steller H., Meier P. Nature Cell Biology 2002, 4(6):445-450.
96. Ryoo H.D., Bergmann A., Gonen H., Ciechanover A., Steller H. Nature Cell Biology 2002, 4(6):432-438.
97. Spector M.S., Desnoyers S., Hoeppner D.J., Hengartner M.O. Nature 1997, 385(6617):653-656.
98. Yan N., Gu L., Kokel D., Chai J., Li W., Han A., Chen L., Xue D., Shi Y. Molecular Cell 2004, 15(6):999-1006.