Identification of genomic aberrations by array comparative genomic hybridization in patients with aortic dissections

Korean Journal of Thoracic and Cardiovascular Surgery

Volumn 44, Issue 2, 2011, Pages 123-130

  Suh, Jong Hui ^a   Yoon, Jeong Seob ^a   Kwon, Jong Bum ^a   Kim, Hwan Wook ^a   Wang, Young Pil ^a  

^a The Catholic University of Korea College of Medicine   (South Korea)

Author keywords

Aorta; Aortic dissection; Genes; Polymerase chain reaction

Indexed keywords

EID: 84859858875     PISSN: 2233601X     EISSN: 20936516     Source Type: Journal    
DOI: 10.5090/kjtcs.2011.44.2.123     Document Type: Article

References (28)

1. Koullias GJ, Ravichandran P, Korkolis DP, Rimm DL, Elefteriades JA. Increased tissue microarray matrix metalloproteinase expression favors proteolysis in thoracic aortic aneurysms and dissections. Ann Thorac Surg 2004;78:2106-11.
2. Siegal EM. Acute aortic dissection. J Hosp Med 2006;1:94-105.
3. Gavazzi G, Deffert C, Trocme C, Schäppi M, Herrmann FR, Krause KH. NOX1 deficiency protects from aortic dissection in response to angiotensin II. Hypertension 2007;50:189-96.
4. Müller BT, Modlich O, Prisack HB, et al. Gene expression profiles in the acutely dissected human aorta. Eur J Vasc Endovasc Surg 2002;24:356-64.
5. Lee ST, Kim JA, Jang SY, Kim DK, Kim JW, Ki CS. A novel COL3A1 gene mutation in patient with aortic dissected aneurysm and cervical artery dissections. Heart Vessels 2008;23:144-8.
6. Weis-Müller BT, Modlich O, Drobinskaya I, et al. Gene expression in acute stanford type A dissection: a comparative microarray study. J Transl Med 2006;4:29.
7. Solinas-Toldo S, Lampel S, Stilgenbauer S, et al. Matrixbased comparative genomic hybridization: biochips to screen for genomic imbalances. Genes Chromosomes Cancer 1997;20:399-407.
8. Snijders AM, Nowak N, Segraves R, et al. Assembly of microarrays for genome-wide measurement of DNA copy number. Nat Genet 2001;29:263-4.
9. Shaw-Smith C, Redon R, Rickman L, et al. Microarray based comparative genomic hybridisation (array-CGH) detects submicroscopic chromosomal deletions and duplications in patients with learning disability/mental retardation and dysmorphic features. J Med Genet 2004;41:241-8.
10. Tyson C, McGillivray B, Chijiwa C, Rajcan-Separovic E. Elucidation of a cryptic interstitial 7q31.3 deletion in a patient with a language disorder and mild mental retardation by array-CGH. Am J Med Genet A 2004;129:254-60.
11. Bonaglia MC, Giorda R, Tenconi R, et al. A 2.3 Mb duplication of chromosome 8q24.3 associated with severe mental retardation and epilepsy detected by standard karyotype. Eur J Hum Genet 2005;13:586-91.
12. Moon HJ, Yim SV, Lee WK, et al. Identification of DNA copy-number aberrations by array-comparative genomic hybridization in patients with schizophrenia. Biochem Biophys Res Commun 2006;344:531-9.
13. Guo SW, Wu Y, Strawn E, et al. Genomic alterations in the endometrium may be a proximate cause for endometriosis. Eur J Obstet Gynecol Reprod Biol 2004;116:89-99.
14. Van Esch H, Bauters M, Ignatius J, et al. Duplication of the MECP2 region is a frequent cause of severe mental retardation and progressive neurological symptoms in males. Am J Hum Genet 2005;77:442-53.
15. Boehm D, Herold S, Kuechler A, Liehr T, Laccone F. Rapid detection of subtelomeric deletion/duplication by novel real-time quantitative PCR using SYBR-green dye. Hum Mutat 2004;23:368-78.
16. Guillaud-Bataille M, Valent A, Soularue P, et al. Detecting single DNA copy number variations in complex genomes using one nanogram of starting DNA and BAC-array CGH. Nucleic Acids Res 2004;32:112-20.
17. Wang G, Brennan C, Rook M, et al. Balanced-PCR amplification allows unbiased identification of genomic copy changes in minute cell and tissue samples. Nucleic Acids Res 2004;32:76-85.
18. Calvo R, West J, Franklin W, et al. Altered HOX and WNT7A expression in human lung cancer. Proc Natl Acad Sci USA 2000;97:12776-81.
19. Jo Y, Anzai T, Sugano Y, et al. Early use of beta-blockers attenuates systemic inflammatory response and lung oxygenation impairment after distal type acute aortic dissection. Heart Vessels 2008;23:334-40.
20. Sakuta A, Kimura F, Aoka Y, Aomi S, Hagiwara N, Kasanuki H. Delayed enhancement on computed tomography in abdominal aortic aneurysm wall. Heart Vessels 2007;22:79-87.
21. Lapuk A, Volik S, Vincent R, et al. Computational BAC clone contig assembly for comprehensive genome analysis. Genes Chromosomes Cancer 2004;40:66-71.
22. Choi YW, Choi JS, Zheng LT, et al. Comparative genomic hybridization array analysis and real time PCR reveals genomic alterations in squamous cell carcinomas of the lung. Lung Cancer 2007;55:43-51.
23. Nakao K, Mehta KR, Fridlyand J, et al. High-resolution analysis of DNA copy number alterations in colorectal cancer by array-based comparative genomic hybridization. Carcinogenesis 2004;25:1345-57.
24. Duff K, Williamson R, Richards SJ. Expression of genes encoding two chains of the collagen type VI molecule during fetal heart development. Int J Cardiol 1990;27:128-9.
25. Tsuji A, Yoshida S, Hasegawa S, et al. Human subtilisinlike proprotein convertase, PACE4 (SPC4) gene expression is highly regulated through E-box elements in HepG2 and GH4C1 cells. J Biochem (Tokyo) 1999;126:494-502.
26. Bourgeron T, Rustin P, Chretien D, et al. Mutation of a nuclear succinate dehydrogenase gene results in mitochondrial respiratory chain deficiency. Nat Genet 1995;11:144-9.
27. Shashi V, Keshavan MS, Howard TD, et al. Cognitive correlates of a functional COMT polymorphism in children with 22q11.2 deletion syndrome. Clin Genet 2006;69:234-8.
28. Gong W, Emanuel BS, Collins J, et al. A transcription map of the DiGeorge and velo-cardio-facial syndrome minimal critical region on 22q11. Hum Mol Genet 1996;5:789-800.