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Volumn 14, Issue 2, 2012, Pages 206-212

Clinical impact of the use of 16S rRNA sequencing method for the identification of "difficult-to-identify" bacteria in immunocompromised hosts

Author keywords

16S rRNA; Immunocompromised hosts

Indexed keywords

ANTIBIOTIC AGENT; RNA 16S;

EID: 84859828858     PISSN: 13982273     EISSN: 13993062     Source Type: Journal    
DOI: 10.1111/j.1399-3062.2011.00687.x     Document Type: Article
Times cited : (17)

References (22)
  • 1
    • 5644227319 scopus 로고    scopus 로고
    • Impact of 16S rRNA gene sequence analysis for identification of bacteria on clinical microbiology and infectious diseases
    • Clarridge JE. Impact of 16S rRNA gene sequence analysis for identification of bacteria on clinical microbiology and infectious diseases. Clin Microbiol Rev 2004; 17: 840-862.
    • (2004) Clin Microbiol Rev , vol.17 , pp. 840-862
    • Clarridge, J.E.1
  • 2
    • 77955910361 scopus 로고    scopus 로고
    • Use of quantitative broad-based polymerase chain reaction for detection and identification of common bacterial pathogens in cerebrospinal fluid
    • Rothman R, Ramachandran P, Yang S, et al. Use of quantitative broad-based polymerase chain reaction for detection and identification of common bacterial pathogens in cerebrospinal fluid. Acad Emerg Med 2010; 17: 741-747.
    • (2010) Acad Emerg Med , vol.17 , pp. 741-747
    • Rothman, R.1    Ramachandran, P.2    Yang, S.3
  • 3
    • 33749820645 scopus 로고    scopus 로고
    • Broad-range bacterial and fungal DNA amplification on vitreous humor from suspected endophthalmitis patients
    • Varghese B, Rodrigues C, Deshmukh M, Natarajan S, Kamdar P, Mehta A. Broad-range bacterial and fungal DNA amplification on vitreous humor from suspected endophthalmitis patients. Mol Diagn Ther 2006; 10: 319-326.
    • (2006) Mol Diagn Ther , vol.10 , pp. 319-326
    • Varghese, B.1    Rodrigues, C.2    Deshmukh, M.3    Natarajan, S.4    Kamdar, P.5    Mehta, A.6
  • 4
    • 0025300402 scopus 로고
    • Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya
    • Woese CR, Kandler O, Wheelis WL. Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya. Proc Natl Acad Sci USA 1990; 87: 4576-4579.
    • (1990) Proc Natl Acad Sci USA , vol.87 , pp. 4576-4579
    • Woese, C.R.1    Kandler, O.2    Wheelis, W.L.3
  • 5
    • 0037952695 scopus 로고    scopus 로고
    • Usefulness of the MicroSeq 500 16S ribosomal DNA-based bacterial identification system for identification of clinically significant bacterial isolates with ambiguous biochemical profiles
    • Woo PC, Ng KH, Lau SK, et al. Usefulness of the MicroSeq 500 16S ribosomal DNA-based bacterial identification system for identification of clinically significant bacterial isolates with ambiguous biochemical profiles. J Clin Microbiol 2003; 41: 1996-2001.
    • (2003) J Clin Microbiol , vol.41 , pp. 1996-2001
    • Woo, P.C.1    Ng, K.H.2    Lau, S.K.3
  • 6
    • 0033775331 scopus 로고    scopus 로고
    • 16S ribosomal DNA sequence analysis of a large collection of environmental and clinical unidentifiable bacterial isolates
    • Drancourt M, Bollet C, Carlioz A, Martelin R, Gayral JP, Raoult D. 16S ribosomal DNA sequence analysis of a large collection of environmental and clinical unidentifiable bacterial isolates. J Clin Microbiol 2000; 38: 3623-3630.
    • (2000) J Clin Microbiol , vol.38 , pp. 3623-3630
    • Drancourt, M.1    Bollet, C.2    Carlioz, A.3    Martelin, R.4    Gayral, J.P.5    Raoult, D.6
  • 7
    • 70449529534 scopus 로고    scopus 로고
    • Comparison of the Biolog OmniLog identification system and 16S ribosomal RNA gene sequencing for accuracy in identification of atypical bacteria of clinical origin
    • Morgan MC, Boyette M, Goforth C, Sperry KV, Greene SR. Comparison of the Biolog OmniLog identification system and 16S ribosomal RNA gene sequencing for accuracy in identification of atypical bacteria of clinical origin. J Microbiol Methods 2009; 79: 336-343.
    • (2009) J Microbiol Methods , vol.79 , pp. 336-343
    • Morgan, M.C.1    Boyette, M.2    Goforth, C.3    Sperry, K.V.4    Greene, S.R.5
  • 8
    • 0033997366 scopus 로고    scopus 로고
    • Identification of coryneform bacterial isolates by ribosomal DNA sequencing analysis
    • Tang YW, Von Graevenitz A, Waddington MG, et al. Identification of coryneform bacterial isolates by ribosomal DNA sequencing analysis. J Clin Microbiol 2000; 38: 1676-1678.
    • (2000) J Clin Microbiol , vol.38 , pp. 1676-1678
    • Tang, Y.W.1    Von Graevenitz, A.2    Waddington, M.G.3
  • 9
    • 0031784307 scopus 로고    scopus 로고
    • Comparison of phenotypic and genotypic technique for identification of unusual aerobic pathogenic gram-negative bacilli
    • Tang YW, Ellis NM, Hopkins MK, Smith DH, Dodge DE, Persing DH. Comparison of phenotypic and genotypic technique for identification of unusual aerobic pathogenic gram-negative bacilli. J Clin Microbiol 1998; 36: 3674-3679.
    • (1998) J Clin Microbiol , vol.36 , pp. 3674-3679
    • Tang, Y.W.1    Ellis, N.M.2    Hopkins, M.K.3    Smith, D.H.4    Dodge, D.E.5    Persing, D.H.6
  • 10
    • 33750344695 scopus 로고    scopus 로고
    • 16S rRNA sequencing in routine bacterial identification: a 30-month experiment
    • Mignard S, Flandrois JP. 16S rRNA sequencing in routine bacterial identification: a 30-month experiment. J Microbiol Methods 2006; 67: 574-581.
    • (2006) J Microbiol Methods , vol.67 , pp. 574-581
    • Mignard, S.1    Flandrois, J.P.2
  • 11
    • 0041919471 scopus 로고    scopus 로고
    • Ribosomal DNA sequencing for identification of aerobic gram-positive rods in the clinical laboratory (an 18-month evaluation)
    • Bosshard PP, Abels S, Zbinden R, Bottger EC, Altwegg M. Ribosomal DNA sequencing for identification of aerobic gram-positive rods in the clinical laboratory (an 18-month evaluation). J Clin Microbiol 2003; 41: 4134-4140.
    • (2003) J Clin Microbiol , vol.41 , pp. 4134-4140
    • Bosshard, P.P.1    Abels, S.2    Zbinden, R.3    Bottger, E.C.4    Altwegg, M.5
  • 12
    • 0242361101 scopus 로고    scopus 로고
    • Identification of bacteria recovered from clinical specimens by 16S rRNA gene sequencing
    • Kiratisin P, Li L, Murray PR, Fischer SH. Identification of bacteria recovered from clinical specimens by 16S rRNA gene sequencing. Eur J Clin Microbiol Infect Dis 2003; 22: 628-631.
    • (2003) Eur J Clin Microbiol Infect Dis , vol.22 , pp. 628-631
    • Kiratisin, P.1    Li, L.2    Murray, P.R.3    Fischer, S.H.4
  • 13
    • 77349106918 scopus 로고    scopus 로고
    • The conundrum of the gram-positive rod: are we missing important pathogens in complicated skin and soft-tissue infections? A case report and review of the literature
    • Clarke TM, Citron DM, Towfigh S. The conundrum of the gram-positive rod: are we missing important pathogens in complicated skin and soft-tissue infections? A case report and review of the literature. Surg Infect 2010; 11: 65-72.
    • (2010) Surg Infect , vol.11 , pp. 65-72
    • Clarke, T.M.1    Citron, D.M.2    Towfigh, S.3
  • 14
    • 79957994560 scopus 로고    scopus 로고
    • Weissella confusa: an unexpected cause of vancomycin-resistant, gram-positive bacteremia in immunocompromised hosts
    • Salimnia H, Alangaden GJ, Bharadwaj R, Painter TM, Chandrasekar PH, Fairfax MR. Weissella confusa: an unexpected cause of vancomycin-resistant, gram-positive bacteremia in immunocompromised hosts. Transpl Infect Dis 2011; 13 (3): 294-298.
    • (2011) Transpl Infect Dis , vol.13 , Issue.3 , pp. 294-298
    • Salimnia, H.1    Alangaden, G.J.2    Bharadwaj, R.3    Painter, T.M.4    Chandrasekar, P.H.5    Fairfax, M.R.6
  • 15
    • 78649638992 scopus 로고    scopus 로고
    • Incidence of low-grade infection in aseptic loosening of total hip arthroplasty
    • Moojen DJF, van Hellemondt G, Vogely HC, et al. Incidence of low-grade infection in aseptic loosening of total hip arthroplasty. Acta Orthop 2010; 81: 667-673.
    • (2010) Acta Orthop , vol.81 , pp. 667-673
    • Moojen, D.J.F.1    van Hellemondt, G.2    Vogely, H.C.3
  • 16
    • 0036301638 scopus 로고    scopus 로고
    • Catheter-related Microbacterium bacteremia identified by 16S rRNA gene sequencing
    • Lau SKP, Woo PCY, Woo GKS, Yuen KY. Catheter-related Microbacterium bacteremia identified by 16S rRNA gene sequencing. J Clin Microbiol 2002; 40: 2681-2685.
    • (2002) J Clin Microbiol , vol.40 , pp. 2681-2685
    • Lau, S.K.P.1    Woo, P.C.Y.2    Woo, G.K.S.3    Yuen, K.Y.4
  • 17
    • 76049118984 scopus 로고    scopus 로고
    • Detection of Cardiobacterium valvarum in a patient with aortic valve infective endocarditis by broad-range PCR
    • Vanerkova M, Zaloudikova B, Nemcova E, et al. Detection of Cardiobacterium valvarum in a patient with aortic valve infective endocarditis by broad-range PCR. J Med Microbiol 2010; 59: 231-234.
    • (2010) J Med Microbiol , vol.59 , pp. 231-234
    • Vanerkova, M.1    Zaloudikova, B.2    Nemcova, E.3
  • 18
    • 0043030063 scopus 로고    scopus 로고
    • Development of broad-range 16S rDNA PCR for use in the routine diagnostic clinical microbiology service
    • Harris KA, Hartley JC. Development of broad-range 16S rDNA PCR for use in the routine diagnostic clinical microbiology service. J Med Microbiol 2003; 52: 685-691.
    • (2003) J Med Microbiol , vol.52 , pp. 685-691
    • Harris, K.A.1    Hartley, J.C.2
  • 19
    • 33746031053 scopus 로고    scopus 로고
    • Evaluating the near-term infant for early onset sepsis: progress and challenges to consider with 16S rDNA polymerase chain reaction testing
    • Jordan JA, Durso MB, Butchko AR, Jones JG, Brozanski BS. Evaluating the near-term infant for early onset sepsis: progress and challenges to consider with 16S rDNA polymerase chain reaction testing. J Mol Diagn 2006; 8: 357-363.
    • (2006) J Mol Diagn , vol.8 , pp. 357-363
    • Jordan, J.A.1    Durso, M.B.2    Butchko, A.R.3    Jones, J.G.4    Brozanski, B.S.5
  • 20
    • 77951911781 scopus 로고    scopus 로고
    • Evaluation of buffy coat 16S rRNA PCR, buffy coat culture and whole blood PCR for detection of bacteraemia
    • Valle DL, Andrade JI, Cabrera EC, Rivera WL. Evaluation of buffy coat 16S rRNA PCR, buffy coat culture and whole blood PCR for detection of bacteraemia. Mem Inst Oswaldo Cruz 2010; 105: 117-122.
    • (2010) Mem Inst Oswaldo Cruz , vol.105 , pp. 117-122
    • Valle, D.L.1    Andrade, J.I.2    Cabrera, E.C.3    Rivera, W.L.4
  • 21
    • 52449129099 scopus 로고    scopus 로고
    • Then and now: use of 16S rDNA gene sequencing for bacterial identification and discovery of novel bacteria in clinical microbiology laboratories
    • Woo PCY, Lau SKP, Tengs JLL, Tse H, Yuen KY. Then and now: use of 16S rDNA gene sequencing for bacterial identification and discovery of novel bacteria in clinical microbiology laboratories. Microbiol Infect 2008; 14: 908-934.
    • (2008) Microbiol Infect , vol.14 , pp. 908-934
    • Woo, P.C.Y.1    Lau, S.K.P.2    Tengs, J.L.L.3    Tse, H.4    Yuen, K.Y.5
  • 22
    • 79960965903 scopus 로고    scopus 로고
    • Utility of matrix-assisted laser desorption ionization time-of-flight mass spectrometry following introduction for routine laboratory bacterial identification
    • Neville SA, Lecordier A, Ziochos H, et al. Utility of matrix-assisted laser desorption ionization time-of-flight mass spectrometry following introduction for routine laboratory bacterial identification. J Clin Microbiol 2011; 49(8): 2980-2984.
    • (2011) J Clin Microbiol , vol.49 , Issue.8 , pp. 2980-2984
    • Neville, S.A.1    Lecordier, A.2    Ziochos, H.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.