Molecular cloning and characterization of the genes encoding an auxin efflux carrier and the auxin influx carriers associated with the adventitious root formation in mango (Mangifera indica L.) cotyledon segments

Plant Physiology and Biochemistry

Volumn 55, Issue , 2012, Pages 33-42

  Li, Yun He ^a   Zou, Ming Hong ^a   Feng, Bi Hong ^b   Huang, Xia ^c   Zhang, Zhi ^a   Sun, Guang Ming ^a  

^a INSTITUTE OF TROPICAL BIOSCIENCE AND BIOTECHNOLOGY   (China)

^b GUANGXI UNIVERSITY   (China)

^c SUN YAT SEN UNIVERSITY   (China)

Author keywords

Adventitious root; Auxin efflux carrier; Auxin influx carrier; Cotyledon segment; Mangifera indica L.; Polar auxin transport

Indexed keywords

COMPLEMENTARY DNA; INDOLEACETIC ACID DERIVATIVE; VEGETABLE PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; CHEMISTRY; CLASSIFICATION; COTYLEDON; DNA SEQUENCE; GENE EXPRESSION REGULATION; GENETICS; GROWTH, DEVELOPMENT AND AGING; MANGIFERA; METABOLISM; MOLECULAR CLONING; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; PLANT ROOT; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEQUENCE HOMOLOGY; TRANSPORT AT THE CELLULAR LEVEL;

AMINO ACID SEQUENCE; BASE SEQUENCE; BIOLOGICAL TRANSPORT; CLONING, MOLECULAR; COTYLEDON; DNA, COMPLEMENTARY; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENE EXPRESSION REGULATION, PLANT; INDOLEACETIC ACIDS; MANGIFERA; MOLECULAR SEQUENCE DATA; PHYLOGENY; PLANT PROTEINS; PLANT ROOTS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID;

MANGIFERA INDICA;

EID: 84859791517     PISSN: 09819428     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.plaphy.2012.03.012     Document Type: Article

References (36)

1. Blakesley D. Auxin Metabolism and Adventitious Root Initiation. Biology of Adventitious Root Formation 1994, 143-154. Plenum Press, New York. T.D. Davis, B.E. Haissig (Eds.).
2. Ljung K., Östin A., Lioussanne L., Sandberg G. Developmental regulation of indole-3-acetic acid turnover in Scots pine seedlings. Plant Physiol. 2001, 125:464-475.
3. Normanly J., Cohen J.D., Fink G.R. Arabidopsis thaliana auxotroph reveal a tryptophan-independent biosynthetic pathway for indole-3-acetic acid. Proc. Natl. Acad. Sci. U.S.A. 1993, 90:10355-10359.
4. Petrášek J., Friml J. Auxin transport routes in plant development. Development 2009, 136:2675-2688.
5. Friml J., Palme K. Polar auxin transport - old questions and new concepts?. Plant Mol. Biol. 2002, 49:273-284.
6. Geisler M., Blakeslee J.J., Bouchard R., Lee O.R., Vincenzetti V., Bandyopadhyay A., Titapiwatanakun B., Peer W.A., Bailly A., Richards E.L., et al. Cellular efflux of auxin catalyzed by the Arabidopsis MDR/PGP transporter AtPGP1. Plant J. 2005, 44:179-194.
7. Kerr I.D., Bennett M.J. New insight into the biochemical mechanisms regulating auxin transport in plants. Biochem. J. 2007, 401:613-622.
8. Wiśniewska J., Xu J., Seifertová D., Brewer P.B., Růžička K., Blilou I., Rouquié D., Benková E., Scheres B., Friml J. Polar PIN localization directs auxin flow in plants. Science 2006, 312:883.
9. Li Y.H., Chen Q.Z., Xiao J.N., Chen Y.F., Li X.J., Staehelin C., Huang X.L. Characteristics of adventitious root formation in cotyledon segments of mango (Mangifera indica L. cv. Zihua): two induction patterns, histological origins and the relationship with polar auxin transport. Plant Growth Regul. 2008, 54:165-177.
10. Liu J.H., Reid D.M. Adventitious rooting in hypocotyls of sunflower (Helianthus annuus) seedlings. IV. The role of changes in endogenous free and conjugated indole-3-acetic acid. Physiol. Plant 1992, 86:285-292.
11. López Nicolás J.L., Acosta M., Sánchez-Bravo J. Role of basipetal auxin transport and lateral auxin movement in rooting and growth of etiolated lupin hypocotyls. Physiol. Plant 2004, 121:294-304.
12. Benková E., Michniewicz M., Sauer M., Teichmann T., Seifertová D., Jürgens G., Friml J. Local, efflux-dependent auxin gradients as a common module for plant organ formation. Cell 2003, 115:591-602.
13. Bhalerao R.P., Eklöf J., Ljung K., Marchant A., Bennett M., Sandberg G. Shoot-derived auxin is essential for early lateral root emergence in Arabidopsis seedlings. Plant J. 2002, 29:325-332.
14. Marchant A., Bhalerao R., Casimiro I., Eklof J., Casero P.J., Bennett M., Sandberg G. AUX1 promotes lateral root formation by facilitating indole-3-acetic acid distribution between sink and source tissues in the Arabidopsis seedling. Plant Cell 2002, 14:589-597.
15. Brinker M., Van Zyl L., Liu W., Craig D., Sederoff R.R., Clapham D.H., Von Arnold S. Microarray analyses of gene expression during adventitious root development in Pinus contorta. Plant Physiol. 2004, 135:1526-1539.
16. Xu M., Zhu L., Shou H., Wu P. A PIN1 family gene, OsPIN1, involved in auxin-dependent adventitious root emergence and tillering in rice. Plant Cell Physiol. 2005, 46:1674-1681.
17. Oliveros-Valenzuela M., Reyes D., Sánchez-Bravo J., Acosta M., Nicolás C. Isolation and characterization of a cDNA clone encoding an auxin influx carrier in carnation cuttings. Expression in different organs and cultivars and its relationship with cold storage. Plant Physiol. Biochem. 2008, 46:1071-1076.
18. Ermel F.F., Vizoso S., Charpentier J.P., Jay-Allemand C., Catesson A.M., Couée I. Mechanisms of primordium formation during adventitious root development from walnut cotyledon explants. Planta 2000, 211:563-574.
19. Gutmann M., Charpentier J.P., Doumas P., Jay-Allemand C. Histological investigation of walnut cotyledon fragments for a better understanding of in vitro adventitious root initiation. Plant Cell Rep. 1996, 15:345-349.
20. Depta H., Eisle K.H., Hertel R. Specific inhibitors of auxin transport: action on tissue segments and in vitro binding to membranes from maize coleoptiles. Plant Sci. Lett. 1983, 31:181-192.
21. Martin H.V., Beffa R., Pilet P.E. A comparison between 3,5-diiodo-4-hydoxybenzoic acid and 2,3,5-triiodobenzoic acid. II. Effects on uptake and efflux of IAA in maize roots. Physiol. Plant 1987, 71:37-43.
22. Yang Y., Hammes U.Z., Taylor C.G., Schachtman D.P., Nielsen E. High-affinity auxin transport by the AUX1 influx carrier protein. Curr. Biol. 2006, 16:1123-1127.
23. Marchler-Bauer A., Lu S., Anderson J.B., Chitsaz F., Derbyshire M.K., et al. CDD: a Conserved Domain Database for the functional annotation of proteins. Nucleic Acids Res. 2011, 39:D225-D229.
24. Pii Y., Crimi M., Cremonese G., Spena A., Pandolfini T. Auxin and nitric oxide control indeterminate nodule formation. BMC Plant Biol. 2007, 7:21.
25. Wang J., Hu H., Wang G., Li J., Chen J., Wu P. Expression of PIN genes in rice (Oryza sativa L.): tissue specificity and regulation by hormones. Mol. Plant 2009, 2:823-831.
26. Mravec J., Skůpa P., Bailly A., Hoyerová K., Křeček P., Bielach A., Petrášek J., Zhang J., Gaykova V., Stierhof Y.D., Dobrev P.I., Schwarzerová K., Rolcík J., Seifertová D., Luschnig C., Benková E., Zazímalová E., Geisler M., Friml J. Subcellular homeostasis of phytohormone auxin is mediated by the ER-localized PIN5 transporter. Nature 2009, 459:1136-1140.
27. Miyashita Y., Takasugi T., Ito Y. Identification and expression analysis of PIN genes in rice. Plant Sci. 2010, 178:424-428.
28. Paponov I.A., Teale W.D., Trebar M., Blilou I., Palme K. The PIN auxin efflux facilitators: evolutionary and functional perspectives. Trends Plant Sci. 2005, 10:170-177.
29. Shen C.J., Bai Y.H., Wang S.K., Zhang S.N., Wu Y.R., Chen M., Jiang D.A., Qi Y.H. Expression profile of PIN, AUX/LAX and PGP auxin transporter gene families in Sorghum bicolor under phytohormone and abiotic stress. FEBS J. 2010, 277:2954-2969.
30. Muday G.K., DeLong A. Polar auxin transport: Controlling where and how much. Trends Plant Sci. 2001, 6:535-542.
31. Noh B., Murphy A.S., Spalding E.P. Multidrug resistance-like genes of Arabidopsis required for auxin transport and auxin-mediated development. Plant Cell 2001, 13:2441-2454.
32. Verrier P., Bird D., Buria B., Dassa E., Forestier C., Geisler M., Klein M., Kolukisaoglu U., Lee Y., Martinoia E., Murphy A., Rea P.A., Samuels L., Schulz B., Spalding E.J., Yazaki K., Theodoulou F.L. Plant ABC proteins - a unified nomenclature and updated inventory. Trends Plant Sci. 2008, 13:151-159.
33. Geisler M., Murphy A.S. The ABC of auxin transport: the role of P-glycoproteins in plant development. FEBS Lett. 2006, 580:1094-1102.
34. Blakeslee J.J., Bandyopadhyay A., Lee O.R., Mravec J., Titapiwatanakun B., Sauer M., Makam S.N., Cheng Y., Bouchard R., Adamec J., Geisler M., Nagashima A., Sakai T., Martinoia E., Friml J., Peer W.A., Murphy A.S. Interactions among PIN-FORMED and P-glycoprotein auxin transporters in Arabidopsis. Plant Cell 2007, 19:131-147.
35. Xiao J.N., Huang X.L., Zhang Y.S., Li Y., Li X.J. Cloning of cDNA fragments related to adventitious root formation from mango cotyledon section. J. Plant Physiol. Mol. Biol. 2004, 30:136-140.
36. Boyce R., Chilana P., Rose T.M. iCODEHOP: a new interactive program for designing Consensus-Degenerate Hybrid Oligonucleotide Primers from multiply aligned protein sequences. Nucleic Acids Res. 2009, 37:W222-W228.