Spectral fingerprinting of soil organic matter composition

Organic Geochemistry

Volumn 46, Issue , 2012, Pages 127-136

  Cécillon, Lauric ^a   Certini, Giacomo ^b   Lange, Holger ^c   Forte, Claudia ^d   Strand, Line Tau ^a  

^a NORWEGIAN UNIVERSITY OF LIFE SCIENCES   (Norway)

^b UNIVERSITY OF FLORENCE   (Italy)

^c NORWEGIAN INSTITUTE OF BIOECONOMY RESEARCH   (Norway)

^d CNR   (Italy)

Author keywords

[No Author keywords available]

Indexed keywords

BIOCHEMICAL COMPONENTS; BLACK CARBON; CHEMOMETRICS; COST-EFFECTIVE SOLUTIONS; DIRECT PREDICTION; ENVIRONMENTAL MONITORING; INFRARED DATA; INFRARED FINGERPRINT; INITIAL ASSESSMENT; MID-INFRARED SPECTROSCOPY; MOLECULAR MIXING MODELS; MULTIVARIATE CALIBRATION; NUCLEAR MAGNETIC RESONANCE TECHNIQUES; NUMBER OF SAMPLES; ORGANIC CARBON CONTENTS; PREDICTIVE ABILITIES; SOIL ORGANIC MATTERS; SOIL SAMPLE; SPECTRAL FINGERPRINTING; WAVEBANDS;

BIOGEOCHEMISTRY; BIOLOGICAL MATERIALS; CARBOHYDRATES; INFRARED SPECTROSCOPY; NUCLEAR MAGNETIC RESONANCE; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; SOIL SURVEYS;

SOILS;

BIOCHEMICAL COMPOSITION; INFRARED SPECTROSCOPY; MULTIVARIATE ANALYSIS; NUCLEAR MAGNETIC RESONANCE; ORGANIC CARBON; SOIL ORGANIC MATTER;

EID: 84859781096     PISSN: 01466380     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.orggeochem.2012.02.006     Document Type: Article

References (50)

1. 13C NMR spectroscopy. Biogeochemistry 1992, 16:1-42.
2. Baldock J.A., Masiello C.A., Gélinas Y., Hedges J.I. Cycling and composition of organic matter in terrestrial and marine ecosystems. Marine Chemistry 2004, 92:39-64.
3. Barros A.S., Rutledge D.N. Principal components transform-partial least squares: a novel method to accelerate cross-validation in PLS regression. Chemometrics and Intelligent Laboratory Systems 2004, 73:245-255.
4. Barros A.S., Safar M., Devaux M.F., Robert P., Bertrand D., Rutledge D.N. Relations between mid-infrared and near-infrared spectra detected by analysis of variance of an intervariable data matrix. Applied Spectroscopy 1997, 51:1384-1393.
5. Barros A.S., Pinto R., Jouan-Rimbaud Bouveresse D., Rutledge D.N. Principal component transform - outer product analysis in the PCA context. Chemometrics and Intelligent Laboratory Systems 2008, 93:43-48.
6. Bellon-Maurel V., McBratney A. Near-infrared (NIR) and mid-infrared (MIR) spectroscopic techniques for assessing the amount of carbon stock in soils - critical review and research perspectives. Soil Biology & Biochemistry 2011, 43:1398-1410.
7. Bellon-Maurel V., Fernandez-Ahumada E., Palagos B., Roger J.M., McBratney A. Critical review of chemometric indicators commonly used for assessing the quality of the prediction of soil attributes by NIR spectroscopy. Trends in Analytical Chemistry 2010, 29:1073-1081.
8. Bornemann L., Welp G., Brodowski S., Rodionov A., Amelung W. Rapid assessment of black carbon in soil organic matter using mid-infrared spectroscopy. Organic Geochemistry 2008, 39:1537-1544.
9. Cécillon L., Cassagne N., Czarnes S., Gros R., Brun J.J. Variable selection in near infrared spectra for the biological characterization of soil and earthworm casts. Soil Biology & Biochemistry 2008, 40:1975-1979.
10. Cécillon L., Barthès B.G., Gomez C., Ertlen D., Genot V., Hedde M., Stevens A., Brun J.J. Assessment and monitoring of soil quality using near infrared reflectance spectroscopy (NIRS). European Journal of Soil Science 2009, 60:770-784.
11. Chang C.W., Laird D.A., Mausbach M.J., Hurburgh C.R. Near-infrared reflectance spectroscopy - principal components regression analyses of soil properties. Soil Science Society of America Journal 2001, 65:480-490.
12. Cheng C.H., Lehmann J., Engelhard M.H. Natural oxidation of black carbon in soils: changes in molecular form and surface charge along a climosequence. Geochimica et Cosmochimica Acta 2008, 72:1598-1610.
13. Chong I.G., Jun C.H. Performance of some variable selection methods when multicollinearity is present. Chemometrics and Intelligent Laboratory Systems 2005, 78:103-112.
14. 13C CP/MAS NMR analysis in Spodosols: chemical removal of magnetic materials. Geoderma 1999, 93:289-310.
15. 13C spectral editing and relative quantitation of a soil sample. Solid State Nuclear Magnetic Resonance 2006, 30:81-88.
16. Gleixner G., Czimczik C.J., Kramer C., Lühker B., Schmidt M.W.I. Plant compounds and their turnover and stabilization as soil organic matter. Global Biogeochemical Cycles in the Climate System 2001, 201-215. Academic Press, San Diego. E.D. Schulze, M. Heimann, S. Harrison, E. Holland, J.L. Lloyd, C. Prentice, D. Schimel (Eds.).
17. Grandy A.S., Neff J.C. Molecular C dynamics downstream: the biochemical decomposition sequence and its impact on soil organic matter structure and function. Science of the Total Environment 2008, 404:297-307.
18. Hedges J.I., Baldock J.A., Gélinas Y., Lee C., Peterson M., Wakeham S.G. Evidence for non-selective preservation of organic matter in sinking marine particles. Nature 2001, 409:801-804.
19. 13C nuclear magnetic resonance. Journal of Geophysical Research 2009, 114:G02014.
20. Jaillais B., Pinto R., Barros A.S., Rutledge D.N. Outer-product analysis (OPA) using PCA to study the influence of temperature on NIR spectra of water. Vibrational Spectroscopy 2005, 39:50-58.
21. 13C CPMAS NMR in conjunction with a molecular mixing model of the Penido Vello peat deposit, NW Spain. Organic Geochemistry 2007, 38:1097-1111.
22. Keiluweit M., Nico P.S., Johnson M.G., Kleber M. Dynamic molecular structure of plant biomass-derived black carbon (Biochar). Environmental Science and Technology 2010, 44:1247-1253.
23. Kelleher B.P., Simpson A.J. Humic substances in soils: are they really chemically distinct?. Environmental Science and Technology 2006, 40:4605-4611.
24. 15N NMR spectroscopy in organic geochemistry and how spin dynamics can either aggravate or improve spectra interpretation. Organic Geochemistry 2011, 42:867-890.
25. Koelmans A.A., Jonker M.T.O., Cornelissen G., Bucheli T.D., Van Noort P.C.M., Gustafsson ö. Black carbon: the reverse of its dark side. Chemosphere 2006, 63:365-377.
26. Kögel-Knabner I. Analytical approaches for characterizing soil organic matter. Organic Geochemistry 2000, 31:609-625.
27. Lehmann J., Solomon D., Kinyangi J., Dathe L., Wirick S., Jacobsen C. Spatial complexity of soil organic matter forms at nanometre scales. Nature Geoscience 2008, 1:238-242.
28. Leifeld J. Application of diffuse reflectance FT-IR spectroscopy and partial least squares regression to predict NMR properties of soil organic matter. European Journal of Soil Science 2006, 57:846-857.
29. Lützow M.v., Kögel-Knabner I., Ekschmitt K., Matzner E., Guggenberger G., Marschner B., Flessa H. Stabilization of organic matter in temperate soils: mechanisms and their relevance under different soil conditions - a review. European Journal of Soil Science 2006, 57:426-445.
30. Martens H.A., Dardenne P. Validation and verification of regression in small data sets. Chemometrics and Intelligent Laboratory Systems 1998, 44:99-121.
31. Mevik B.H., Wehrens R. The pls package: principal component and partial least squares regression in R. Journal of Statistical Software 2007, 18:1-24.
32. 13C NMR and elemental analyses. Biogeochemistry 2005, 72:1-34.
33. Olk D.C.A. A chemical fractionation for structure-function relations of soil organic matter in nutrient cycling. Soil Science Society of America Journal 2006, 70:1013-1022.
34. R Development Core Team R: A Language and Environment for Statistical Computing 2011, R Foundation for Statistical Computing, Vienna, Austria.
35. Reeves J.B. Near- versus mid-infrared diffuse reflectance spectroscopy for soil analysis emphasizing carbon and laboratory versus on-site analysis: where are we and what needs to be done?. Geoderma 2010, 158:3-14.
36. Rodríguez-Murillo J.C., Almendros G., Knicker H. Wetland soil organic matter composition in a Mediterranean semiarid wetland (Las Tablas de Daimiel, Central Spain): insight into different carbon sequestration pathways. Organic Geochemistry 2011, 42:762-773.
37. Rumpel C., Rabia N., Derenne S., Quenea K., Eusterhues K., Kögel-Knabner I., Mariotti A. Alteration of soil organic matter following treatment with hydrofluoric acid (HF). Organic Geochemistry 2006, 37:1437-1451.
38. Rumpel C., Chabbi A., Nunan N., Dignac M.F. Impact of land use change on the molecular composition of soil organic matter. Journal of Analytical Applied Pyrolysis 2009, 85:431-434.
39. Saiz-Jimenez C. Analytical pyrolysis of humic substances: pitfalls, limitations, and possible solutions. Environmental Science and Technology 1994, 28:1773-1780.
40. Schmidt M.W.I., Noack A.G. Black carbon in soils and sediments: analysis, distribution, implications and current challenges. Global Biogeochemical Cycles 2000, 14:777-793.
41. Schmidt M.W.I., Torn M.S., Abiven S., Dittmar T., Guggenberger G., Janssens I.A., Kleber M., Kögel-Knabner I., Lehmann J., Manning D.A.C., Nannipieri P., Rasse D.P., Weiner S., Trumbore S.E. Persistence of soil organic matter as an ecosystem property. Nature 2011, 477:49-56.
42. 13C CP/MAS n.m.r. study. Australian Journal of Soil Research 1994, 32:1215-1229.
43. 13C NMR spectra of natural organic matter 2. HF-treated soil fractions. Geoderma 2000, 96:159-171.
44. Smith, B., 1999. Infrared Spectral Interpretation: A Systematic Approach. CRC Press, Taylor & Francis Group, New York.
45. Strand L.T., Haaland S., Kaste Ø., Stuanes A.O. Natural variability in soil and runoff from small headwater catchments at Storgama, Norway. Ambio 2008, 37:18-28.
46. Tenenhaus M. La régression PLS 1998, Editions Technip, Paris.
47. Terhoeven-Urselmans T., Michel K., Helfrich M., Flessa H., Ludwig B. Near-infrared spectroscopy can predict the composition of organic matter in soil and litter. Journal of Plant Nutrition and Soil Science 2006, 169:168-174.
48. Veselá A., Barros A.S., Synytsya A., Delgadillo I., čopíková J., Coimbra M.A. Infrared spectroscopy and outer product analysis for quantification of fat, nitrogen, and moisture of cocoa powder. Analytica Chimica Acta 2007, 601:77-86.
49. Viscarra Rossel R.A., Walvoort D.J.J., McBratney A.B., Janik L.J., Skjemstad J.O. Visible, near infrared, mid infrared or combined diffuse reflectance spectroscopy for simultaneous assessment of various soil properties. Geoderma 2006, 131:59-75.
50. Workman J., Weyer L. Practical Guide to Interpretive Near-Infrared Spectroscopy 2007, CRC Press, Taylor & Francis Group, New York.