Accumulation of rare earth elements by siderophore-forming Arthrobacter luteolus isolated from rare earth environment of Chavara, India

Journal of Biosciences

Volumn 37, Issue 1, 2012, Pages 25-31

  Emmanuel, E S Challaraj ^a   Ananthi, T ^b   Anandkumar, B ^c   Maruthamuthu, S ^d  

^a Department of Microbiology   (India)

^b Sourashtra College   (India)

^c INDIRA GANDHI CENTRE FOR ATOMIC RESEARCH   (India)

^d CENTRAL ELECTROCHEMICAL RESEARCH INSTITUTE   (India)

Author keywords

Bioaccumulation; rare earth elements; siderophore

Indexed keywords

CARBOXYLIC ACID; CATECHOLATE; ELEMENT; SAMARIUM; SCANDIUM; SIDEROPHORE; UNCLASSIFIED DRUG;

BACTERIUM; BIOACCUMULATION; ORGANIC ACID; RARE EARTH ELEMENT; SAMARIUM; SCANDIUM; SIDEROPHORE;

ARTHROBACTER; ARTHROBACTER LUTEOLUS; ARTICLE; BACTERIAL STRAIN; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATE; INDIA; MOLECULAR WEIGHT; NONHUMAN; NUCLEOTIDE SEQUENCE; SOIL ANALYSIS;

ARTHROBACTER; BASE SEQUENCE; CATECHOLS; CLONING, MOLECULAR; ELECTROPHORESIS, POLYACRYLAMIDE GEL; ENVIRONMENT; INDIA; MASS SPECTROMETRY; METALS, RARE EARTH; MOLECULAR SEQUENCE DATA; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SIDEROPHORES; SOIL; SOIL MICROBIOLOGY; SPECTROSCOPY, FOURIER TRANSFORM INFRARED;

CHAVARA; INDIA; KERALA;

ARTHROBACTER LUTEOLUS; BACTERIA (MICROORGANISMS);

EID: 84859776357     PISSN: 02505991     EISSN: 09737138     Source Type: Journal    
DOI: 10.1007/s12038-011-9173-3     Document Type: Article

References (43)

1. Ahmed ZU, Shapiro S and Vining LC 1984 Excretion of α-keto acids by strains of Streptomyces venezuelae. Can. J. Microbiol. 30 1014-1021 (Pubitemid 14049060)
2. Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W and Lipman DJ 1997 Gapped BLAST and PSI-BLAST: a new generation of Protein database search programs. Nucleic Acids Res. 25 3389-3402 (Pubitemid 27359211)
3. Anandkumar B, Rajasekar A, Venkatachari G and Maruthamuthu S 2009 Effect of thermophilic sulphate-reducing bacteria (Desulfotomaculum geothermicum) isolated from Indian petroleum refinery on the corrosion of mild steel. Curr. Sci. 97 342-348
4. Andres Y, Texier AC and Cloirec PL 2003 Rare earth elements removal by microbial biosorption: A review. Environ. Technol. 23 1367-1375 (Pubitemid 38028954)
5. Andres Y, Thouand G, Boualam M and Mergeay M 2000 Factors influencing the biosorption of gadolinium by microorganism and its mobilization from sand. Appl. Microbiol. Biotechnol. 54 262-267 (Pubitemid 30662739)
6. Arnow E 1936 Colorimetric determination of the components of 3, 4-dihydroxyphenyl-alanine-tyrosine mixtures. J. Biol. Chem. 118 531-537
7. Atkin CL, Neilands JB and Phaff H 1970 Rhodotorulic acid from species of Rhodospirillum, Rhodotorula, Sporidiobolus and Sporobolomyces. J. Bacteriol. 103 722- 733
8. Bayer ME and Bayer MH 1991 Lanthanide accumulation in the periplasmic space of Escherichia coli B. J. Bacteriol. 173 141-149
9. Beveridge TJ and Fyfe WS 1985 Metal complexation by bacterial cell walls. Can. J. Earth Sci. 22 1893-1898
10. Brantley S L, Liermann L, Bau M and Wu S 2001 Uptake of trace metals and rare earth elements from hornblende by a soil bacterium. Geomicrobiol. J. 18 37-61 (Pubitemid 32333974)
11. Crosa JH and Walsh CT 2002 Genetics and assembly line enzymology of siderophore biosynthesis in bacteria. Microbiol. Molecular Biol. Rev. 66 223-249 (Pubitemid 34625709)
12. Date AR and Gray AL 1985 Determination of trace elements in geological samples by inductively coupled plasma source mass spectrometry. Spectrochim. Acta B 40 115-122
13. Emmanuel ESC, Vignesh V, Anandkumar B and S Maruthamuthu 2010 Bioaccumulation of cerium and neodymium by Bacillus cereus isolated from rare earth environments of Chavara and Manavalakurichi, India. Indian J. Microbiol. 51 488-495
14. Fessenden RJ and Fessenden JS 1986 Organic Chemistry 3rd edition (Monterey, CA: Brooks and Cole)
15. Guerinot ML 1994 Microbial iron transport. Ann. Rev. Microbiol. 48 743-772 (Pubitemid 24334115)
16. Henderson P 1984 General geochemical properties and abundances of the rare earth elements; in Rare earth element geochemistry (ed.) P Henderson (Amsterdam: Elsevier) pp. 1-32
17. Holt JG, Kreig NR, Sneath PHA, Staley JT and Williams ST 1994 Endospore forming Gram positive rods; in Bergey's manual of determinative bacteriology 9th edition (ed.) WR Hensyl (Baltimore, MD: Williams and Wilkins) pp. 559-570
18. Jeya R, Balasubramanian G and Thampi PK 2008 Determination of rare earth elements in Indian coastal monazite by ICP-AES and ICP-MS analysis and their geochemical significance. Curr. Sci. 94 1296-1302 (Pubitemid 351798658)
19. Kalinowski BE, Liermann LJ, Brantley SL, Barnes A and Pantano CG 2000 X-ray photoelectronspectroscopic evidence for bacteria-enhanced dissolution of hornblende. Geochim. Cosmochim. Acta 64 1331-1343 (Pubitemid 30309136)
20. Kamijo M, Suzuki T, Kawai K and Murase H 1998 Accumulation of yttrium by Variovorax paradoxus. J. Ferment. Bioeng. 86 564-568 (Pubitemid 29048952)
21. Kutzner HJ 1981 The family Streptomycetacae; in The Prokaryotes: A Handbook on habitats, isolation and identification of bacteria (eds.) MP Starr, H Stolp, HG Truper, A Balows and HG Schlegel (Berlin: Springer-Verlag) pp. 2028-2090
22. Laemmli UK 1970 Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227 680-685
23. Liermann LJ, Kalinowski BE, Barnes AS, Zhou X and Brantley SL 2000 Measurements of pH by microelectrodes in biofilms grown on silicate surfaces. Chem. Geol. 171 1-16 (Pubitemid 32170034)
24. Martinez JS, Franklin JNC, Mann EL, Martin JD, Haygood MG and Butler A 2003 Structure and membrane affinity of a suite of amphiphilic siderophores produced by a marine bacterium. Proc. Natl. Acad. Sci. U.S.A. 100 3754-3759 (Pubitemid 36418103)
25. Matzanke BF 1991 Structures, coordination chemistry and functions of microbial iron chelates; in CRC Handbook of microbial iron chelates (ed.) G Winkelmann (Boca Raton, FL: CRC Press) pp. 15-37
26. Merroun ML, Ben Chekroun K, Arias JM and Gonzalez-Munoz MT 2003 Lanthanum fixation by Myxococcus xanthus: Cellular location and extra cellular polysaccharide observation. Chemosphere 52 113-120 (Pubitemid 36566012)
27. Meyer JM and Abdullah MA 1978 The fluroscent pigment of Pseudomonas fluroscens biosynthesis, purification and physical-chemical properties. J. Gen. Microbiol. 107 319-328 (Pubitemid 8397930)
28. Morel FMM and Hering JG 1993 Principles and applications of aquatic chemistry (New York: Wiley)
29. Neilands JB 1981 Microbial iron compounds. Annu. Rev. Biochem. 50 715-731
30. Ozaki T, Suzuki Y, Nankawa T, Yoshida T, Ohmiki T, Kimura T, Arokiasamy and Francis J 2005 Interaction of rare earth elements with bacteria and organic ligands. J. Alloys Compounds 408 1334-1338
31. Reigh G and O'Connell M 1988 Siderophore production is strain specific in Rhizobium; in Nitrogen fixation: hundred years after (eds.) H Bothe, FJ DeBruijin and WE Newto (New York: Gustav Fischer) pp. 826- 839
32. Roane TM and Kellogg ST 1996 Characterization of bacterial communities in heavy metal contaminated soils. Can. J. Microbiol. 42 593-603
33. Roane TM, Reynolds KA, Maier RM and Pepper IL 2009 Microorganisms; in Environmental microbiology (eds.) RM Maier, IL Pepper and CP Gerba (New York: Academic Press) pp. 9-25
34. Rozycki H and Strzelczyk E 1986 Organic acids production by Streptomyces spp. isolated from soil, rhizospere and mycorrhizospere of pine (Pinus sylvestris L.). Plant Soil 96 337-345
35. Schwyn B and Neilands JB 1987 Universal chemical assay for the detection and determination of siderophores. Anal. Biochem. 160 47-56 (Pubitemid 17020596)
36. Stone AT 1997 Reactions of extracellular organic ligands with dissolved metal ions and mineral surfaces. Rev. Mineral. Soc. Am. 35 309-344
37. Suryakala D, UmaMaheswaridevi P and Vijaya Lakshmi K 2004 Chemical characterization and antibiosis of siderphores of rhizosphere fluroscent Pseudomonads. Indian J. Microbiol. 44 105-108
38. Teske A, Hinrichs KU, Edgcomb V, Gomez AV, Kysela D, Sylva SP, Sogin ML and Jannasch HW 2002 Microbial Diversity of hydrothermal sediments in the Guaymas Basin: evidence for anaerobic methanotrophic communities. Appl. Environ. Microbiol. 68 1994-2007 (Pubitemid 34280012)
39. Tsuruta T 2006 Selective accumulation of light or heavy rare earth elements using gram-positive bacteria. Colloids 52 117-22 (Pubitemid 44428159)
40. Tyler G 2004 Rare earth elements in soil and plant systems - A review. Plant Soil 267 191-206
41. Urrutia MM, Kemper M, Doyle R and Beveridge TJ 1992 The membrane-induced proton motive force influences the metal binding ability of Bacillus subtilis cell walls. Appl. Env. Microbiol. 58 3837-3844
42. Walsh JN, Barker J and Buckley F 1981 Simultaneous determination of the rare-earth elements in rocks using inductively coupled plasma source spectrometry. Chem. Geol. 33 141-153
43. Wawer C and Muyzer G 1995 Genetic diversity of Desulfovibrio spp. in Environmental samples analysed by denaturing gradient gel electrophoresis of (NiFe) hydrogenase gene fragments. Appl. Environ. Microbiol. 61 2203-2210