Genotype imputation for the prediction of genomic breeding values in non-genotyped and low-density genotyped individuals

BMC Proceedings

Volumn 5, Issue SUPPL. 3, 2011, Pages

  Cleveland, Matthew A ^a   Hickey, John M ^b   Kinghorn, Brian P ^b  

^a GENUS PLC   (United States)

^b UNIVERSITY OF NEW ENGLAND   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

ACCURACY; ANALYTICAL PARAMETERS; CONFERENCE PAPER; GENOMIC BREEDING VALUE; GENOTYPE; PREDICTION; PRIORITY JOURNAL; SINGLE NUCLEOTIDE POLYMORPHISM;

EID: 84859762864     PISSN: None     EISSN: 17536561     Source Type: Journal    
DOI: 10.1186/1753-6561-5-S3-S6     Document Type: Conference Paper

References (9)

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3. Recursive long range phasing and long haplotype library imputation: building a global haplotype library for Holstein cattle. Hickey JM, Kinghorn BP, Cleveland MA, Tier B, van der Werf JHJ, Proc 9th World Congr Genet Appl Livestock Prod. 2010
4. An efficient algorithm for segregation analysis in large populations. Kerr RJ, Kinghorn BP, J Anim Breed Genet 1996 113 457 469 10.1111/j.1439-0388. 1996.tb00636.x (Pubitemid 126671574)
5. The use of family relationships and linkage disequilibrium to impute phase and missing genotypes in up to whole genome sequence density genotypic data. Meuwissen THE, Goddard ME, Genet 2010 185 1441 1449 10.1534/genetics.110. 113936
6. Phasing of SNP data by combined recursive long range phasing and long haplotype imputation. Hickey JM, Kinghorn BP, Tier B, van der Werf JHJ, Proc Assoc Advmt Anim Breed Genet 2010 18 72 75
7. An index of information content for genotype probabilities derived from segregation analysis. Kinghorn BP, Genet 1997 145 479 483 (Pubitemid 27068398)
8. QTLMAS 2010: simulated dataset. Szydlowski M, Paczynska P, BMC Proceedings 2011 5 Suppl 3 3 10.1186/1753-6561-5-S3-S3 21554761
9. Genomic breeding value prediction using three Bayesian methods and application to reduced density marker panels. Cleveland MA, Forni S, Deeb N, Maltecca C, BMC Proc 2010 4 Suppl 1 6 10.1186/1753-6561-4-S1-S6 20380760