메뉴 건너뛰기




Volumn 84, Issue 6, 2012, Pages 890-896

Improved quantitative PCR protocols for adenovirus and CMV with an internal inhibition control system and automated nucleic acid isolation

Author keywords

Broncho alveolar lavage fluid; Quantitation; Stool; TaqMan; Viral load

Indexed keywords

ADENOVIRUS; ARTICLE; AUTOMATION; CYTOMEGALOVIRUS; DNA EXTRACTION; LUNG LAVAGE; NUCLEIC ACID ANALYSIS; PNEUMONIA; POLYMERASE CHAIN REACTION; VIRUS LOAD;

EID: 84859759048     PISSN: 01466615     EISSN: 10969071     Source Type: Journal    
DOI: 10.1002/jmv.23285     Document Type: Article
Times cited : (30)

References (30)
  • 1
    • 0035126283 scopus 로고    scopus 로고
    • Purification and characterization of PCR-inhibitory components in blood cells
    • Al Soud WA, Radstrom P. 2001. Purification and characterization of PCR-inhibitory components in blood cells. J Clin Microbiol 39: 485- 493.
    • (2001) J Clin Microbiol , vol.39 , pp. 485-493
    • Al Soud, W.A.1    Radstrom, P.2
  • 2
    • 0034459011 scopus 로고    scopus 로고
    • Effects of amplification facilitators on diagnostic PCR in the presence of blood, feces, and meat
    • Al-Soud W, Radstrom P. 2000. Effects of amplification facilitators on diagnostic PCR in the presence of blood, feces, and meat. J Clin Microbiol 38: 4463- 4470.
    • (2000) J Clin Microbiol , vol.38 , pp. 4463-4470
    • Al-Soud, W.1    Radstrom, P.2
  • 3
    • 33847023002 scopus 로고    scopus 로고
    • Relationship between cytomegalovirus DNA load in epithelial lining fluid and plasma of lung transplant recipients and analysis of coinfection with Epstein-Barr virus and human herpesvirus 6 in the lung compartment
    • Bauer CC, Jaksch P, Aberle SW, Haber H, Lang G, Klepetko W, Hofmann H, Puchhammer-Stöckl E. 2006. Relationship between cytomegalovirus DNA load in epithelial lining fluid and plasma of lung transplant recipients and analysis of coinfection with Epstein-Barr virus and human herpesvirus 6 in the lung compartment. J Clin Microbiol 45: 324- 328.
    • (2006) J Clin Microbiol , vol.45 , pp. 324-328
    • Bauer, C.C.1    Jaksch, P.2    Aberle, S.W.3    Haber, H.4    Lang, G.5    Klepetko, W.6    Hofmann, H.7    Puchhammer-Stöckl, E.8
  • 5
    • 0034046010 scopus 로고    scopus 로고
    • Comparison of quantitative cytomegalovirus (CMV) PCR in plasma and CMV antigenemia assay: Clinical utility of the prototype AMPLICOR CMV MONITOR test in transplant recipients
    • Caliendo AM, St George K, Kao SY, Allega J, Tan BH, LaFontaine R, Bui L, Rinaldo CR. 2000. Comparison of quantitative cytomegalovirus (CMV) PCR in plasma and CMV antigenemia assay: Clinical utility of the prototype AMPLICOR CMV MONITOR test in transplant recipients. J Clin Microbiol 38: 2122- 2127.
    • (2000) J Clin Microbiol , vol.38 , pp. 2122-2127
    • Caliendo, A.M.1    St George, K.2    Kao, S.Y.3    Allega, J.4    Tan, B.H.5    LaFontaine, R.6    Bui, L.7    Rinaldo, C.R.8
  • 6
    • 2442422123 scopus 로고    scopus 로고
    • Correlation between viral loads of cytomegalovirus in blood and bronchoalveolar lavage specimens from lung transplant recipients determined by histology and immunohistochemistry
    • Chemaly RF, Yen-Lieberman B, Castilla EA, Reilly A, Arrigain S, Farver C, Avery RK, Gordon SM, Procop GW. 2004. Correlation between viral loads of cytomegalovirus in blood and bronchoalveolar lavage specimens from lung transplant recipients determined by histology and immunohistochemistry. J Clin Microbiol 42: 2168- 2172.
    • (2004) J Clin Microbiol , vol.42 , pp. 2168-2172
    • Chemaly, R.F.1    Yen-Lieberman, B.2    Castilla, E.A.3    Reilly, A.4    Arrigain, S.5    Farver, C.6    Avery, R.K.7    Gordon, S.M.8    Procop, G.W.9
  • 8
    • 38849187249 scopus 로고    scopus 로고
    • Rapid quantitative PCR assays for the simultaneous detection of herpes simplex virus, varicella zoster virus, cytomegalovirus, Epstein-Barr virus, and human herpesvirus 6 DNA in blood and other clinical specimens
    • Engelmann I, Petzold DR, Kosinska A, Hepkema BG, Schulz TF, Heim A. 2008. Rapid quantitative PCR assays for the simultaneous detection of herpes simplex virus, varicella zoster virus, cytomegalovirus, Epstein-Barr virus, and human herpesvirus 6 DNA in blood and other clinical specimens. J Med Virol 80: 467- 477.
    • (2008) J Med Virol , vol.80 , pp. 467-477
    • Engelmann, I.1    Petzold, D.R.2    Kosinska, A.3    Hepkema, B.G.4    Schulz, T.F.5    Heim, A.6
  • 9
    • 79961127379 scopus 로고    scopus 로고
    • High lethality of human adenovirus disease in adult allogeneic stem cell transplant recipients with high adenoviral blood load
    • Ganzenmueller T, Buchholz S, Harste G, Dammann E, Trenschel R, Heim A. 2011. High lethality of human adenovirus disease in adult allogeneic stem cell transplant recipients with high adenoviral blood load. J Clin Virol 52: 55- 59.
    • (2011) J Clin Virol , vol.52 , pp. 55-59
    • Ganzenmueller, T.1    Buchholz, S.2    Harste, G.3    Dammann, E.4    Trenschel, R.5    Heim, A.6
  • 10
    • 84859742565 scopus 로고    scopus 로고
    • Adenoviral load diagnostics by quantitative polymerase chain reaction: Techniques and application
    • DOI: 10.1002/rmv.724. [Epub ahead of print].
    • Ganzenmueller T, Heim A. 2011. Adenoviral load diagnostics by quantitative polymerase chain reaction: Techniques and application. Rev Med Virol DOI: 10.1002/rmv.724. [Epub ahead of print].
    • (2011) Rev Med Virol
    • Ganzenmueller, T.1    Heim, A.2
  • 12
    • 79960088767 scopus 로고    scopus 로고
    • Validation of internal controls for extraction and amplification of nucleic acids from enteric viruses in water samples
    • Hata A, Katayama H, Kitajima M, Visvanathan C, Nol C, Furumai H. 2011. Validation of internal controls for extraction and amplification of nucleic acids from enteric viruses in water samples. Appl Environ Microbiol 77: 4336- 4343.
    • (2011) Appl Environ Microbiol , vol.77 , pp. 4336-4343
    • Hata, A.1    Katayama, H.2    Kitajima, M.3    Visvanathan, C.4    Nol, C.5    Furumai, H.6
  • 13
    • 0037410402 scopus 로고    scopus 로고
    • Rapid and quantitative detection of human adenovirus DNA by real-time PCR
    • Heim A, Ebnet C, Harste G, Pring-Akerblom P. 2003. Rapid and quantitative detection of human adenovirus DNA by real-time PCR. J Med Virol 70: 228- 239.
    • (2003) J Med Virol , vol.70 , pp. 228-239
    • Heim, A.1    Ebnet, C.2    Harste, G.3    Pring-Akerblom, P.4
  • 14
    • 2442562584 scopus 로고    scopus 로고
    • Practical considerations in design of internal amplification controls for diagnostic PCR assays
    • Hoorfar J, Malorny B, Abdulmawjood A, Cook N, Wagner M, Fach P. 2004a. Practical considerations in design of internal amplification controls for diagnostic PCR assays. J Clin Microbiol 42: 1863- 1868.
    • (2004) J Clin Microbiol , vol.42 , pp. 1863-1868
    • Hoorfar, J.1    Malorny, B.2    Abdulmawjood, A.3    Cook, N.4    Wagner, M.5    Fach, P.6
  • 15
    • 12744272142 scopus 로고    scopus 로고
    • Diagnostic PCR: Validation and sample preparation are two sides of the same coin
    • Hoorfar J, Wolffs P, Radstrom P. 2004b. Diagnostic PCR: Validation and sample preparation are two sides of the same coin. APMIS 112: 808- 814.
    • (2004) APMIS , vol.112 , pp. 808-814
    • Hoorfar, J.1    Wolffs, P.2    Radstrom, P.3
  • 16
    • 77956835993 scopus 로고    scopus 로고
    • Comparison of in-house real-time quantitative PCR to the Adenovirus R-Gene kit for determination of adenovirus load in clinical samples
    • Jeulin H, Salmon A, Bordigoni P, Venard V. 2010. Comparison of in-house real-time quantitative PCR to the Adenovirus R-Gene kit for determination of adenovirus load in clinical samples. J Clin Microbiol 48: 3132- 3137.
    • (2010) J Clin Microbiol , vol.48 , pp. 3132-3137
    • Jeulin, H.1    Salmon, A.2    Bordigoni, P.3    Venard, V.4
  • 17
    • 80054070909 scopus 로고    scopus 로고
    • Diagnostic value of quantitative PCR for adenovirus detection in stool samples as compared with antigen detection and cell culture in haematopoietic stem cell transplant recipients
    • Jeulin H, Salmon A, Bordigoni P, Venard V. 2011. Diagnostic value of quantitative PCR for adenovirus detection in stool samples as compared with antigen detection and cell culture in haematopoietic stem cell transplant recipients. Clin Microbiol Infect 17: 1674- 1680.
    • (2011) Clin Microbiol Infect , vol.17 , pp. 1674-1680
    • Jeulin, H.1    Salmon, A.2    Bordigoni, P.3    Venard, V.4
  • 18
    • 0025810836 scopus 로고
    • Inhibitory effects of urine on the polymerase chain reaction for cytomegalovirus DNA
    • Khan G, Kangro HO, Coates PJ, Heath RB. 1991. Inhibitory effects of urine on the polymerase chain reaction for cytomegalovirus DNA. J Clin Pathol 44: 360- 365.
    • (1991) J Clin Pathol , vol.44 , pp. 360-365
    • Khan, G.1    Kangro, H.O.2    Coates, P.J.3    Heath, R.B.4
  • 20
  • 21
    • 33746834486 scopus 로고    scopus 로고
    • Molecular identification of adenovirus sequences: A rapid scheme for early typing of human adenoviruses in diagnostic samples of immunocompetent and immunodeficient patients
    • Madisch I, Wolfel R, Harste G, Pommer H, Heim A. 2006. Molecular identification of adenovirus sequences: A rapid scheme for early typing of human adenoviruses in diagnostic samples of immunocompetent and immunodeficient patients. J Med Virol 78: 1210- 1217.
    • (2006) J Med Virol , vol.78 , pp. 1210-1217
    • Madisch, I.1    Wolfel, R.2    Harste, G.3    Pommer, H.4    Heim, A.5
  • 25
    • 7044249625 scopus 로고    scopus 로고
    • Internal control DNA for PCR assays introduced into lambda phage particles exhibits nuclease resistance
    • Stocher M, Berg J. 2004. Internal control DNA for PCR assays introduced into lambda phage particles exhibits nuclease resistance. Clin Chem 50: 2163- 2166.
    • (2004) Clin Chem , vol.50 , pp. 2163-2166
    • Stocher, M.1    Berg, J.2
  • 26
    • 0037357541 scopus 로고    scopus 로고
    • A convenient approach to the generation of multiple internal control DNA for a panel of real-time PCR assays
    • Stocher M, Leb V, Berg J. 2003. A convenient approach to the generation of multiple internal control DNA for a panel of real-time PCR assays. J Virol Methods 108: 1- 8.
    • (2003) J Virol Methods , vol.108 , pp. 1-8
    • Stocher, M.1    Leb, V.2    Berg, J.3
  • 27
    • 0033967124 scopus 로고    scopus 로고
    • Genotyping of adenoviruses isolated in an outbreak in a bone marrow transplant unit shows that diverse strains are involved
    • Venard V, Carret A, Corsaro D, Bordigoni P, Le Faou A. 2000. Genotyping of adenoviruses isolated in an outbreak in a bone marrow transplant unit shows that diverse strains are involved. J Hosp Infect 44: 71- 74.
    • (2000) J Hosp Infect , vol.44 , pp. 71-74
    • Venard, V.1    Carret, A.2    Corsaro, D.3    Bordigoni, P.4    Le Faou, A.5
  • 28
    • 4444322292 scopus 로고    scopus 로고
    • Human cytomegalovirus load in plasma and bronchoalveolar lavage fluid: A longitudinal study of lung transplant recipients
    • Westall GP, Michaelides A, Williams TJ, Snell GI, Kotsimbos TC. 2004. Human cytomegalovirus load in plasma and bronchoalveolar lavage fluid: A longitudinal study of lung transplant recipients. J Infect Dis 190: 1076- 1083.
    • (2004) J Infect Dis , vol.190 , pp. 1076-1083
    • Westall, G.P.1    Michaelides, A.2    Williams, T.J.3    Snell, G.I.4    Kotsimbos, T.C.5
  • 29
    • 0030748867 scopus 로고    scopus 로고
    • Inhibition and facilitation of nucleic acid amplification
    • Wilson IG. 1997. Inhibition and facilitation of nucleic acid amplification. Appl Environ Microbiol 63: 3741- 3751.
    • (1997) Appl Environ Microbiol , vol.63 , pp. 3741-3751
    • Wilson, I.G.1
  • 30
    • 43349103895 scopus 로고    scopus 로고
    • Genetic variations in the gB, UL144 and UL149 genes of human cytomegalovirus strains collected from congenitally and postnatally infected Japanese children
    • Yan H, Koyano S, Inami Y, Yamamoto Y, Suzutani T, Mizuguchi M, Ushijima H, Kurane I, Inoue N. 2008. Genetic variations in the gB, UL144 and UL149 genes of human cytomegalovirus strains collected from congenitally and postnatally infected Japanese children. Arch Virol 153: 667- 674.
    • (2008) Arch Virol , vol.153 , pp. 667-674
    • Yan, H.1    Koyano, S.2    Inami, Y.3    Yamamoto, Y.4    Suzutani, T.5    Mizuguchi, M.6    Ushijima, H.7    Kurane, I.8    Inoue, N.9


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.