Near-equilibrium measurements of nonequilibrium free energy

Physical Review Letters

Volumn 108, Issue 15, 2012, Pages

  Sivak, David A ^a   Crooks, Gavin E ^a  

^a LAWRENCE BERKELEY NATIONAL LABORATORY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DRIVEN SYSTEM; ENSEMBLE AVERAGES; FREE ENERGY CHANGE; NON EQUILIBRIUM; NONEQUILIBRIUM FREE ENERGY; REAL SYSTEMS; THERMODYNAMIC EQUILIBRIA; TIME-REVERSED;

COMPUTER SIMULATION; PROBABILITY DISTRIBUTIONS; REAL TIME SYSTEMS; THERMODYNAMICS;

FREE ENERGY;

EID: 84859588316     PISSN: 00319007     EISSN: 10797114     Source Type: Journal    
DOI: 10.1103/PhysRevLett.108.150601     Document Type: Article

References (22)

1. E.H. Feng and G.E. Crooks, Phys. Rev. Lett. 101, 090602 (2008). PRLTAO 0031-9007 10.1103/PhysRevLett.101.090602
2. B. Gaveau and L.S. Schulman, Phys. Lett. A 229, 347 (1997). PYLAAG 0375-9601 10.1016/S0375-9601(97)00185-0
3. B. Gaveau, K. Martinás, M. Moreau, and J. Toth, Physica (Amsterdam) 305A, 445 (2002). PHYADX 0378-4371 10.1016/S0378-4371(01)00502-7 (Pubitemid 34232281)
4. R.B. Bernstein and R.D. Levine, J. Chem. Phys. 57, 434 (1972). JCPSA6 0021-9606 10.1063/1.1677983
5. J. Honerkamp, Statistical Physics: An Advanced Approach with Applications (Springer, New York, 2002), 2nd ed.
6. B. Gaveau, M. Moreau, and L.S. Schulman, Phys. Lett. A 372, 3415 (2008). PYLAAG 0375-9601 10.1016/j.physleta.2008.01.081
7. G.E. Crooks, Phys. Rev. E PLEEE8 1063-651X 61, 2361 (2000). 10.1103/PhysRevE.61.2361
8. D.J. Evans and D.J. Searles, Phys. Rev. E PLEEE8 1063-651X 52, 5839 (1995). 10.1103/PhysRevE.52.5839
9. C. Jarzynski, Phys. Rev. E PLEEE8 1539-3755 73, 046105 (2006). 10.1103/PhysRevE.73.046105
10. R.S. Ingarden, Int. J. Eng. Sci. 19, 1609 (1981). IJESAN 0020-7225 10.1016/0020-7225(81)90153-1 (Pubitemid 12468697)
11. S. Kullback and R.A. Leibler, Ann. Math. Stat. AASTAD 0003-4851 22, 79 (1951). 10.1214/aoms/1177729694
12. R. Zwanzig, Nonequilibrium Statistical Mechanics (Oxford University Press, New York, 2001).
13. G.M. Wang, E.M. Sevick, E. Mittag, D.J. Searles, and D.J. Evans, Phys. Rev. Lett. 89, 050601 (2002). PRLTAO 0031-9007 10.1103/PhysRevLett.89.050601
14. E.H. Trepagnier, C. Jarzynski, F. Ritort, G.E. Crooks, C.J. Bustamante, and J. Liphardt, Proc. Natl. Acad. Sci. U.S.A. PNASA6 0027-8424 101, 15038 (2004). 10.1073/pnas.0406405101 (Pubitemid 39391714)
15. O. Mazonka and C. Jarzynski, arXiv:cond-mat/9912121.
16. J. Horowitz and C. Jarzynski, Phys. Rev. E PLEEE8 1539-3755 79, 021106 (2009). 10.1103/PhysRevE.79.021106
17. N. Metropolis, A.W. Rosenbluth, M.N. Rosenbluth, A.H. Teller, and E. Teller, J. Chem. Phys. 21, 1087 (1953). JCPSA6 0021-9606 10.1063/1.1699114
18. T.H. Cormen, C.E. Leiserson, R.L. Rivest, and C. Stein, Introduction to Algorithms (MIT Press, Cambridge, 2001), 2nd ed.
19. G.E. Crooks, Phys. Rev. E PLEEE8 1063-651X 60, 2721 (1999). 10.1103/PhysRevE.60.2721
20. H. Clausen-Schaumann, M. Rief, C. Tolksdorf, and H.E. Gaub, Biophys. J. 78, 1997 (2000). BIOJAU 0006-3495 10.1016/S0006-3495(00)76747-6
21. C. Jarzynski and D.K. Wójcik, Phys. Rev. Lett. 92, 230602 (2004). PRLTAO 0031-9007 10.1103/PhysRevLett.92.230602
22. A. Baranyai and D.J. Evans, Phys. Rev. A 40, 3817 (1989). PLRAAN 0556-2791 10.1103/PhysRevA.40.3817