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Volumn 30, Issue 4, 2012, Pages 612-622

High prevalence of evolutionarily conserved and species-specific genomic aberrations in mouse pluripotent stem cells

Author keywords

Chromosomal aberrations; Embryonic stem cells; Genomic instability; Induced pluripotent stem cells; Pluripotent stem cells

Indexed keywords

SURVIVIN;

EID: 84859503582     PISSN: 10665099     EISSN: None     Source Type: Journal    
DOI: 10.1002/stem.1057     Document Type: Article
Times cited : (44)

References (49)
  • 1
    • 33747195353 scopus 로고    scopus 로고
    • Induction of Pluripotent Stem Cells from Mouse Embryonic and Adult Fibroblast Cultures by Defined Factors
    • DOI 10.1016/j.cell.2006.07.024, PII S0092867406009767
    • Takahashi K, Yamanaka S. Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors. Cell 2006;126:663-676. (Pubitemid 44233629)
    • (2006) Cell , vol.126 , Issue.4 , pp. 663-676
    • Takahashi, K.1    Yamanaka, S.2
  • 3
    • 33646482721 scopus 로고    scopus 로고
    • Current status of chromosomal abnormalities in mouse embryonic stem cell lines used in Japan
    • Sugawara A, Goto K, Sotomaru Y et al. Current status of chromosomal abnormalities in mouse embryonic stem cell lines used in Japan. Comp Med 2006;56:31-34.
    • (2006) Comp Med , vol.56 , pp. 31-34
    • Sugawara, A.1    Goto, K.2    Sotomaru, Y.3
  • 4
    • 83255189758 scopus 로고    scopus 로고
    • Screening ethnically diverse human embryonic stem cells identifies a chromosome 20 minimal amplicon conferring growth advantage
    • Amps K, Andrews PW, Anyfantis G et al. Screening ethnically diverse human embryonic stem cells identifies a chromosome 20 minimal amplicon conferring growth advantage. Nat Biotechnol 2011;29: 1132-1144.
    • (2011) Nat Biotechnol , vol.29 , pp. 1132-1144
    • Amps, K.1    Andrews, P.W.2    Anyfantis, G.3
  • 5
    • 44949093525 scopus 로고    scopus 로고
    • Karyotype analysis of the euploid cell population of a mouse embryonic stem cell line revealed a high incidence of chromosome abnormalities that varied during culture
    • DOI 10.1159/000124377
    • Rebuzzini P, Neri T, Mazzini G et al. Karyotype analysis of the euploid cell population of a mouse embryonic stem cell line revealed a high incidence of chromosome abnormalities that varied during culture. Cytogenet Genome Res 2008;121:18-24. (Pubitemid 351820626)
    • (2008) Cytogenetic and Genome Research , vol.121 , Issue.1 , pp. 18-24
    • Rebuzzini, P.1    Neri, T.2    Mazzini, G.3    Zuccotti, M.4    Redi, C.A.5    Garagna, S.6
  • 7
    • 77957334627 scopus 로고    scopus 로고
    • Identification and classification of chromosomal aberrations in human induced pluripotent stem cells
    • Mayshar Y, Ben-David U, Lavon N et al. Identification and classification of chromosomal aberrations in human induced pluripotent stem cells. Cell Stem Cell 2010;7:521-531.
    • (2010) Cell Stem Cell , vol.7 , pp. 521-531
    • Mayshar, Y.1    Ben-David, U.2    Lavon, N.3
  • 8
    • 78650971216 scopus 로고    scopus 로고
    • Dynamic changes in the copy number of pluripotency and cell proliferation genes in human ESCs and iPSCs during reprogramming and time in culture
    • Laurent LC, Ulitsky I, Slavin I et al. Dynamic changes in the copy number of pluripotency and cell proliferation genes in human ESCs and iPSCs during reprogramming and time in culture. Cell Stem Cell 2011;8:106-118.
    • (2011) Cell Stem Cell , vol.8 , pp. 106-118
    • Laurent, L.C.1    Ulitsky, I.2    Slavin, I.3
  • 9
    • 79952126043 scopus 로고    scopus 로고
    • Copy number variation and selection during reprogramming to pluripotency
    • Hussein SM, Batada NN, Vuoristo S et al. Copy number variation and selection during reprogramming to pluripotency. Nature 2011;471: 58-62.
    • (2011) Nature , vol.471 , pp. 58-62
    • Hussein, S.M.1    Batada, N.N.2    Vuoristo, S.3
  • 10
    • 79952258224 scopus 로고    scopus 로고
    • Somatic coding mutations in human induced pluripotent stem cells
    • Gore A, Fung HL, Young J et al. Somatic coding mutations in human induced pluripotent stem cells. Nature 2011;471:63-67.
    • (2011) Nature , vol.471 , pp. 63-67
    • Gore, A.1    Fung, H.L.2    Young, J.3
  • 11
    • 79961138790 scopus 로고    scopus 로고
    • Large-scale analysis reveals acquisition of lineage-specific chromosomal aberrations in human adult stem cells
    • Ben-David U, Mayshar Y, Benvenisty N. Large-scale analysis reveals acquisition of lineage-specific chromosomal aberrations in human adult stem cells. Cell Stem Cell 2011;9:97-102.
    • (2011) Cell Stem Cell , vol.9 , pp. 97-102
    • Ben-David, U.1    Mayshar, Y.2    Benvenisty, N.3
  • 13
    • 75349095926 scopus 로고    scopus 로고
    • Excision of reprogramming transgenes improves the differentiation potential of iPS cells generated with a single excisable vector
    • Sommer CA, Sommer AG, Longmire TA et al. Excision of reprogramming transgenes improves the differentiation potential of iPS cells generated with a single excisable vector. Stem Cells 2010;28: 64-74.
    • (2010) Stem Cells , vol.28 , pp. 64-74
    • Sommer, C.A.1    Sommer, A.G.2    Longmire, T.A.3
  • 14
    • 80054963501 scopus 로고    scopus 로고
    • Transcriptomic analysis of pluripotent stem cells: Insights into health and disease
    • Yeo JC, Ng HH. Transcriptomic analysis of pluripotent stem cells: Insights into health and disease. Genome Med 2011;3:68.
    • (2011) Genome Med , vol.3 , pp. 68
    • Yeo, J.C.1    Ng, H.H.2
  • 15
    • 77951688715 scopus 로고    scopus 로고
    • Differences between karyotypically normal and abnormal human embryonic stem cells
    • Yang S, Lin G, Tan YQ et al. Differences between karyotypically normal and abnormal human embryonic stem cells. Cell Prolif 2010;43: 195-206.
    • (2010) Cell Prolif , vol.43 , pp. 195-206
    • Yang, S.1    Lin, G.2    Tan, Y.Q.3
  • 16
    • 78649519470 scopus 로고    scopus 로고
    • Effect of chromosome instability on the maintenance and differentiation of human embryonic stem cells in vitro and in vivo
    • Moon SH, Kim JS, Park SJ et al. Effect of chromosome instability on the maintenance and differentiation of human embryonic stem cells in vitro and in vivo. Stem Cell Res 2011;6:50-59.
    • (2011) Stem Cell Res , vol.6 , pp. 50-59
    • Moon, S.H.1    Kim, J.S.2    Park, S.J.3
  • 17
    • 79953058250 scopus 로고    scopus 로고
    • The tumorigenicity of human embryonic and induced pluripotent stem cells
    • Ben-David U, Benvenisty N. The tumorigenicity of human embryonic and induced pluripotent stem cells. Nat Rev Cancer 2011;11: 268-277.
    • (2011) Nat Rev Cancer , vol.11 , pp. 268-277
    • Ben-David, U.1    Benvenisty, N.2
  • 18
    • 77249123407 scopus 로고    scopus 로고
    • Signatures of mutation and selection in the cancer genome
    • Bignell GR, Greenman CD, Davies H et al. Signatures of mutation and selection in the cancer genome. Nature 2010;463:893-898.
    • (2010) Nature , vol.463 , pp. 893-898
    • Bignell, G.R.1    Greenman, C.D.2    Davies, H.3
  • 19
    • 78650752402 scopus 로고    scopus 로고
    • Cell type of origin influences the molecular and functional properties of mouse induced pluripotent stem cells
    • Polo JM, Liu S, Figueroa ME et al. Cell type of origin influences the molecular and functional properties of mouse induced pluripotent stem cells. Nat Biotechnol 2010;28:848-855.
    • (2010) Nat Biotechnol , vol.28 , pp. 848-855
    • Polo, J.M.1    Liu, S.2    Figueroa, M.E.3
  • 20
    • 77953532417 scopus 로고    scopus 로고
    • Activation of the imprinted Dlk1-Dio3 region correlates with pluripotency levels of mouse stem cells
    • Liu L, Luo GZ, Yang W et al. Activation of the imprinted Dlk1-Dio3 region correlates with pluripotency levels of mouse stem cells. J Biol Chem 2010;285:19483-19490.
    • (2010) J Biol Chem , vol.285 , pp. 19483-19490
    • Liu, L.1    Luo, G.Z.2    Yang, W.3
  • 21
    • 77952425747 scopus 로고    scopus 로고
    • Aberrant silencing of imprinted genes on chromosome 12qF1 in mouse induced pluripotent stem cells
    • Stadtfeld M, Apostolou E, Akutsu H et al. Aberrant silencing of imprinted genes on chromosome 12qF1 in mouse induced pluripotent stem cells. Nature 2010;465:175-181.
    • (2010) Nature , vol.465 , pp. 175-181
    • Stadtfeld, M.1    Apostolou, E.2    Akutsu, H.3
  • 22
    • 79958240566 scopus 로고    scopus 로고
    • Different developmental potential of pluripotent stem cells generated by different reprogramming strategies
    • Jiang J, Ding G, Lin J et al. Different developmental potential of pluripotent stem cells generated by different reprogramming strategies. J Mol Cell Biol 2011;3:197-199.
    • (2011) J Mol Cell Biol , vol.3 , pp. 197-199
    • Jiang, J.1    Ding, G.2    Lin, J.3
  • 23
    • 80455174608 scopus 로고    scopus 로고
    • Derivation of haploid embryonic stem cells from mouse embryos
    • Leeb M, Wutz A. Derivation of haploid embryonic stem cells from mouse embryos. Nature 2011;479:131-134.
    • (2011) Nature , vol.479 , pp. 131-134
    • Leeb, M.1    Wutz, A.2
  • 24
    • 33646184682 scopus 로고    scopus 로고
    • DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage
    • Zody MC, Garber M, Adams DJ et al. DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage. Nature 2006;440:1045-1049.
    • (2006) Nature , vol.440 , pp. 1045-1049
    • Zody, M.C.1    Garber, M.2    Adams, D.J.3
  • 25
    • 62149096747 scopus 로고    scopus 로고
    • The anti-apoptotic gene survivin contributes to teratoma formation by human embryonic stem cells
    • Blum B, Bar-Nur O, Golan-Lev T et al. The anti-apoptotic gene survivin contributes to teratoma formation by human embryonic stem cells. Nat Biotechnol 2009;27:281-287.
    • (2009) Nat Biotechnol , vol.27 , pp. 281-287
    • Blum, B.1    Bar-Nur, O.2    Golan-Lev, T.3
  • 26
    • 74849135201 scopus 로고    scopus 로고
    • The tumorigenicity of diploid and aneuploid human pluripotent stem cells
    • Blum B, Benvenisty N. The tumorigenicity of diploid and aneuploid human pluripotent stem cells. Cell Cycle 2009;8:3822-3830.
    • (2009) Cell Cycle , vol.8 , pp. 3822-3830
    • Blum, B.1    Benvenisty, N.2
  • 27
    • 78349313687 scopus 로고    scopus 로고
    • Solution structure of the catalytic domain of the mitochondrial protein ICT1 that is essential for cell vitality
    • Handa Y, Hikawa Y, Tochio N et al. Solution structure of the catalytic domain of the mitochondrial protein ICT1 that is essential for cell vitality. J Mol Biol 2010;404:260-273.
    • (2010) J Mol Biol , vol.404 , pp. 260-273
    • Handa, Y.1    Hikawa, Y.2    Tochio, N.3
  • 30
    • 76249090489 scopus 로고    scopus 로고
    • BioGPS: An extensible and customizable portal for querying and organizing gene annotation resources
    • Wu C, Orozco C, Boyer J et al. BioGPS: An extensible and customizable portal for querying and organizing gene annotation resources. Genome Biol 2009;10:R130.
    • (2009) Genome Biol , vol.10
    • Wu, C.1    Orozco, C.2    Boyer, J.3
  • 31
    • 77956269672 scopus 로고    scopus 로고
    • A data integration approach to mapping OCT4 gene regulatory networks operative in embryonic stem cells and embryonal carcinoma cells
    • Jung M, Peterson H, Chavez L et al. A data integration approach to mapping OCT4 gene regulatory networks operative in embryonic stem cells and embryonal carcinoma cells. PLoS One 2010;5: e10709.
    • (2010) PLoS One , vol.5
    • Jung, M.1    Peterson, H.2    Chavez, L.3
  • 32
    • 78149465975 scopus 로고    scopus 로고
    • A genome-wide RNAi screen reveals determinants of human embryonic stem cell identity
    • Chia NY, Chan YS, Feng B et al. A genome-wide RNAi screen reveals determinants of human embryonic stem cell identity. Nature 2010;468:316-320.
    • (2010) Nature , vol.468 , pp. 316-320
    • Chia, N.Y.1    Chan, Y.S.2    Feng, B.3
  • 33
    • 57449118907 scopus 로고    scopus 로고
    • Human embryonic stem cells reveal recurrent genomic instability at 20q11.21
    • Lefort N, Feyeux M, Bas C et al. Human embryonic stem cells reveal recurrent genomic instability at 20q11.21. Nat Biotechnol 2008;26: 1364-1366.
    • (2008) Nat Biotechnol , vol.26 , pp. 1364-1366
    • Lefort, N.1    Feyeux, M.2    Bas, C.3
  • 34
    • 57449090630 scopus 로고    scopus 로고
    • Recurrent chromosomal abnormalities in human embryonic stem cells
    • Spits C, Mateizel I, Geens M et al. Recurrent chromosomal abnormalities in human embryonic stem cells. Nat Biotechnol 2008;26: 1361-1363.
    • (2008) Nat Biotechnol , vol.26 , pp. 1361-1363
    • Spits, C.1    Mateizel, I.2    Geens, M.3
  • 35
    • 77952699848 scopus 로고    scopus 로고
    • Human embryonic stem cells with biological and epigenetic characteristics similar to those of mouse ESCs
    • Hanna J, Cheng AW, Saha K et al. Human embryonic stem cells with biological and epigenetic characteristics similar to those of mouse ESCs. Proc Natl Acad Sci USA 2010;107:9222-9227.
    • (2010) Proc Natl Acad Sci USA , vol.107 , pp. 9222-9227
    • Hanna, J.1    Cheng, A.W.2    Saha, K.3
  • 36
    • 78049505171 scopus 로고    scopus 로고
    • Different flavors of pluripotency, molecular mechanisms, and practical implications
    • Buecker C, Geijsen N. Different flavors of pluripotency, molecular mechanisms, and practical implications. Cell Stem Cell 2010;7: 559-564.
    • (2010) Cell Stem Cell , vol.7 , pp. 559-564
    • Buecker, C.1    Geijsen, N.2
  • 37
    • 34247352040 scopus 로고    scopus 로고
    • Evolutionary and biomedical insights from the rhesus macaque genome
    • Gibbs RA, Rogers J, Katze MG et al. Evolutionary and biomedical insights from the rhesus macaque genome. Science 2007;316: 222-234.
    • (2007) Science , vol.316 , pp. 222-234
    • Gibbs, R.A.1    Rogers, J.2    Katze, M.G.3
  • 38
    • 79953854769 scopus 로고    scopus 로고
    • Karotypic abnormalities in human induced pluripotent stem cells and embryonic stem cells
    • Taapken SM, Nisler BS, Newton MA et al. Karotypic abnormalities in human induced pluripotent stem cells and embryonic stem cells. Nat Biotechnol 2011;29:313-314.
    • (2011) Nat Biotechnol , vol.29 , pp. 313-314
    • Taapken, S.M.1    Nisler, B.S.2    Newton, M.A.3
  • 39
    • 67849092746 scopus 로고    scopus 로고
    • The cell cycle and Myc intersect with mechanisms that regulate pluripotency and reprogramming
    • Singh AM, Dalton S. The cell cycle and Myc intersect with mechanisms that regulate pluripotency and reprogramming. Cell Stem Cell 2009;5:141-149.
    • (2009) Cell Stem Cell , vol.5 , pp. 141-149
    • Singh, A.M.1    Dalton, S.2
  • 40
    • 79951816916 scopus 로고    scopus 로고
    • Human embryonic stem cells suffer from centrosomal amplification
    • Holubcova Z, Matula P, Sedlackova M et al. Human embryonic stem cells suffer from centrosomal amplification. Stem Cells 2011;29: 46-56.
    • (2011) Stem Cells , vol.29 , pp. 46-56
    • Holubcova, Z.1    Matula, P.2    Sedlackova, M.3
  • 43
    • 30344444783 scopus 로고    scopus 로고
    • The molecular basis of common and rare fragile sites
    • DOI 10.1016/j.canlet.2005.07.039, PII S0304383505008268
    • Schwartz M, Zlotorynski E, Kerem B. The molecular basis of common and rare fragile sites. Cancer Lett 2006;232:13-26. (Pubitemid 43054977)
    • (2006) Cancer Letters , vol.232 , Issue.1 , pp. 13-26
    • Schwartz, M.1    Zlotorynski, E.2    Kerem, B.3
  • 45
    • 79955525482 scopus 로고    scopus 로고
    • Nucleotide deficiency promotes genomic instability in early stages of cancer development
    • Bester AC, Roniger M, Oren YS et al. Nucleotide deficiency promotes genomic instability in early stages of cancer development. Cell 2011; 145:435-446.
    • (2011) Cell , vol.145 , pp. 435-446
    • Bester, A.C.1    Roniger, M.2    Oren, Y.S.3
  • 46
    • 33749384368 scopus 로고    scopus 로고
    • Common fragile sites are conserved features of human and mouse chromosomes and relate to large active genes
    • DOI 10.1101/gr.5335506
    • Helmrich A, Stout-Weider K, Hermann K et al. Common fragile sites are conserved features of human and mouse chromosomes and relate to large active genes. Genome Res 2006;16:1222-1230. (Pubitemid 44506955)
    • (2006) Genome Research , vol.16 , Issue.10 , pp. 1222-1230
    • Helmrich, A.1    Stout-Weider, K.2    Hermann, K.3    Schrock, E.4    Heiden, T.5
  • 48
    • 0037126393 scopus 로고    scopus 로고
    • Cloning and characterization of the common fragile site FRA6F harboring a replicative senescence gene and frequently deleted in human tumors
    • DOI 10.1038/sj.onc.1205573
    • Morelli C, Karayianni E, Magnanini C et al. Cloning and characterization of the common fragile site FRA6F harboring a replicative senescence gene and frequently deleted in human tumors. Oncogene 2002;21:7266-7276. (Pubitemid 35305615)
    • (2002) Oncogene , vol.21 , Issue.47 , pp. 7266-7276
    • Morelli, C.1    Karayianni, E.2    Magnanini, C.3    Mungall, A.J.4    Thorland, E.5    Negrini, M.6    Smith, D.I.7    Barbanti-Brodano, G.8
  • 49
    • 77951060421 scopus 로고    scopus 로고
    • DNA breaks at fragile sites generate oncogenic RET/PTC rearrangements in human thyroid cells
    • Gandhi M, Dillon LW, Pramanik S et al. DNA breaks at fragile sites generate oncogenic RET/PTC rearrangements in human thyroid cells. Oncogene 2010;29:2272-2280.
    • (2010) Oncogene , vol.29 , pp. 2272-2280
    • Gandhi, M.1    Dillon, L.W.2    Pramanik, S.3


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