메뉴 건너뛰기




Volumn 90, Issue 4, 2012, Pages 648-660

Identification of IRF8, TMEM39A, and IKZF3-ZPBP2 as susceptibility loci for systemic lupus erythematosus in a large-scale multiracial replication study

(57)  Lessard, Christopher J a,b,g   Adrianto, Indra a   Ice, John A a   Wiley, Graham B a   Kelly, Jennifer A a   Glenn, Stuart B a   Adler, Adam J a   Li, He a,b   Rasmussen, Astrid a   Williams, Adrienne H c   Ziegler, Julie c   Comeau, Mary E c   Marion, Miranda c   Wakeland, Benjamin E d   Liang, Chaoying d   Ramos, Paula S e   Grundahl, Kiely M a   Gallant, Caroline J f   Alarcón, Graciela S h   Anaya, Juan Manuel i   more..


Author keywords

[No Author keywords available]

Indexed keywords

AUTOANTIGEN; IKAROS TRANSCRIPTION FACTOR; INTERFERON; INTERFERON CONSENSUS SEQUENCE BINDING PROTEIN; MEMBRANE PROTEIN; PROTEIN IKZF3; TRANSMEMBRANE PROTEIN 39A; UNCLASSIFIED DRUG; ZONA PELLUCIDA BINDING PROTEIN 2;

EID: 84859491100     PISSN: 00029297     EISSN: 15376605     Source Type: Journal    
DOI: 10.1016/j.ajhg.2012.02.023     Document Type: Article
Times cited : (158)

References (66)
  • 1
    • 0036451486 scopus 로고    scopus 로고
    • Epidemiology of systemic lupus erythematosus
    • M. Petri Epidemiology of systemic lupus erythematosus Best Pract. Res. Clin. Rheumatol. 16 2002 847 858
    • (2002) Best Pract. Res. Clin. Rheumatol. , vol.16 , pp. 847-858
    • Petri, M.1
  • 2
    • 67849099131 scopus 로고    scopus 로고
    • Recent insights into the genetic basis of systemic lupus erythematosus
    • K.L. Moser, J.A. Kelly, C.J. Lessard, and J.B. Harley Recent insights into the genetic basis of systemic lupus erythematosus Genes Immun. 10 2009 373 379
    • (2009) Genes Immun. , vol.10 , pp. 373-379
    • Moser, K.L.1    Kelly, J.A.2    Lessard, C.J.3    Harley, J.B.4
  • 3
    • 17244373451 scopus 로고    scopus 로고
    • Familial aggregation of systemic lupus erythematosus, rheumatoid arthritis, and other autoimmune diseases in 1,177 lupus patients from the GLADEL cohort
    • Grupo Latinoamericano de Estudio del Lupus Eritematoso (GLADEL)
    • D. Alarcón-Segovia, M.E. Alarcón-Riquelme, M.H. Cardiel, F. Caeiro, L. Massardo, A.R. Villa, B.A. Pons-Estel Grupo Latinoamericano de Estudio del Lupus Eritematoso (GLADEL) Familial aggregation of systemic lupus erythematosus, rheumatoid arthritis, and other autoimmune diseases in 1,177 lupus patients from the GLADEL cohort Arthritis Rheum. 52 2005 1138 1147
    • (2005) Arthritis Rheum. , vol.52 , pp. 1138-1147
    • Alarcón-Segovia, D.1    Alarcón-Riquelme, M.E.2    Cardiel, M.H.3    Caeiro, F.4    Massardo, L.5    Villa, A.R.6    Pons-Estel, B.A.7
  • 4
    • 33750987918 scopus 로고    scopus 로고
    • Autoimmune disease aggregation in families with primary Sjögren's syndrome
    • J.M. Anaya, G.J. Tobon, P. Vega, and J. Castiblanco Autoimmune disease aggregation in families with primary Sjögren's syndrome J. Rheumatol. 33 2006 2227 2234
    • (2006) J. Rheumatol. , vol.33 , pp. 2227-2234
    • Anaya, J.M.1    Tobon, G.J.2    Vega, P.3    Castiblanco, J.4
  • 6
    • 0033021206 scopus 로고    scopus 로고
    • Familial aggregation of lupus and autoimmunity in an unusual multiplex pedigree
    • A.L. Sestak, T.S. Shaver, K.L. Moser, B.R. Neas, and J.B. Harley Familial aggregation of lupus and autoimmunity in an unusual multiplex pedigree J. Rheumatol. 26 1999 1495 1499
    • (1999) J. Rheumatol. , vol.26 , pp. 1495-1499
    • Sestak, A.L.1    Shaver, T.S.2    Moser, K.L.3    Neas, B.R.4    Harley, J.B.5
  • 7
    • 78649830454 scopus 로고    scopus 로고
    • Genetic susceptibility to systemic lupus erythematosus in the genomic era
    • Y. Deng, and B.P. Tsao Genetic susceptibility to systemic lupus erythematosus in the genomic era Nat. Rev. Rheumatol. 6 2010 683 692
    • (2010) Nat. Rev. Rheumatol. , vol.6 , pp. 683-692
    • Deng, Y.1    Tsao, B.P.2
  • 9
    • 0016209543 scopus 로고
    • Histocompatibility (HL-A) antigens and lymphocytotoxic antibodies in systemic lupus erythematosus (SLE)
    • K.M. Nies, J.C. Brown, E.L. Dubois, F.P. Quismorio, G.J. Friou, and P.I. Terasaki Histocompatibility (HL-A) antigens and lymphocytotoxic antibodies in systemic lupus erythematosus (SLE) Arthritis Rheum. 17 1974 397 402
    • (1974) Arthritis Rheum. , vol.17 , pp. 397-402
    • Nies, K.M.1    Brown, J.C.2    Dubois, E.L.3    Quismorio, F.P.4    Friou, G.J.5    Terasaki, P.I.6
  • 17
    • 38649125210 scopus 로고    scopus 로고
    • Genome-wide association scan in women with systemic lupus erythematosus identifies susceptibility variants in ITGAM, PXK, KIAA1542 and other loci
    • International Consortium for Systemic Lupus Erythematosus Genetics (SLEGEN)
    • J.B. Harley, M.E. Alarcón-Riquelme, L.A. Criswell, C.O. Jacob, R.P. Kimberly, K.L. Moser, B.P. Tsao, T.J. Vyse, C.D. Langefeld, S.K. Nath International Consortium for Systemic Lupus Erythematosus Genetics (SLEGEN) Genome-wide association scan in women with systemic lupus erythematosus identifies susceptibility variants in ITGAM, PXK, KIAA1542 and other loci Nat. Genet. 40 2008 204 210
    • (2008) Nat. Genet. , vol.40 , pp. 204-210
    • Harley, J.B.1    Alarcón-Riquelme, M.E.2    Criswell, L.A.3    Jacob, C.O.4    Kimberly, R.P.5    Moser, K.L.6    Tsao, B.P.7    Vyse, T.J.8    Langefeld, C.D.9    Nath, S.K.10
  • 18
    • 77649206245 scopus 로고    scopus 로고
    • Genome-wide association study in Asian populations identifies variants in ETS1 and WDFY4 associated with systemic lupus erythematosus
    • Asian Lupus Genetics Consortium
    • W. Yang, N. Shen, D.Q. Ye, Q. Liu, Y. Zhang, X.X. Qian, N. Hirankarn, D. Ying, H.F. Pan, C.C. Mok Asian Lupus Genetics Consortium Genome-wide association study in Asian populations identifies variants in ETS1 and WDFY4 associated with systemic lupus erythematosus PLoS Genet. 6 2010 e1000841
    • (2010) PLoS Genet. , vol.6 , pp. 1000841
    • Yang, W.1    Shen, N.2    Ye, D.Q.3    Liu, Q.4    Zhang, Y.5    Qian, X.X.6    Hirankarn, N.7    Ying, D.8    Pan, H.F.9    Mok, C.C.10
  • 21
    • 70350629871 scopus 로고    scopus 로고
    • Genome-wide association study in a Chinese Han population identifies nine new susceptibility loci for systemic lupus erythematosus
    • J.W. Han, H.F. Zheng, Y. Cui, L.D. Sun, D.Q. Ye, Z. Hu, J.H. Xu, Z.M. Cai, W. Huang, and G.P. Zhao Genome-wide association study in a Chinese Han population identifies nine new susceptibility loci for systemic lupus erythematosus Nat. Genet. 41 2009 1234 1237
    • (2009) Nat. Genet. , vol.41 , pp. 1234-1237
    • Han, J.W.1    Zheng, H.F.2    Cui, Y.3    Sun, L.D.4    Ye, D.Q.5    Hu, Z.6    Xu, J.H.7    Cai, Z.M.8    Huang, W.9    Zhao, G.P.10
  • 23
    • 78650862201 scopus 로고    scopus 로고
    • Identification of a systemic lupus erythematosus susceptibility locus at 11p13 between PDHX and CD44 in a multiethnic study
    • Marta E. Alarcón-Riquelme on behalf of the BIOLUPUS and GENLES Networks
    • C.J. Lessard, I. Adrianto, J.A. Kelly, K.M. Kaufman, K.M. Grundahl, A. Adler, A.H. Williams, C.J. Gallant, J.M. Anaya, S.C. Bae Marta E. Alarcón-Riquelme on behalf of the BIOLUPUS and GENLES Networks Identification of a systemic lupus erythematosus susceptibility locus at 11p13 between PDHX and CD44 in a multiethnic study Am. J. Hum. Genet. 88 2011 83 91
    • (2011) Am. J. Hum. Genet. , vol.88 , pp. 83-91
    • Lessard, C.J.1    Adrianto, I.2    Kelly, J.A.3    Kaufman, K.M.4    Grundahl, K.M.5    Adler, A.6    Williams, A.H.7    Gallant, C.J.8    Anaya, J.M.9    Bae, S.C.10
  • 27
    • 79957991917 scopus 로고    scopus 로고
    • Association of genetic variants in complement factor H and factor H-related genes with systemic lupus erythematosus susceptibility
    • BIOLUPUS Network GENLES Network
    • J. Zhao, H. Wu, M. Khosravi, H. Cui, X. Qian, J.A. Kelly, K.M. Kaufman, C.D. Langefeld, A.H. Williams, M.E. Comeau BIOLUPUS Network GENLES Network Association of genetic variants in complement factor H and factor H-related genes with systemic lupus erythematosus susceptibility PLoS Genet. 7 2011 e1002079
    • (2011) PLoS Genet. , vol.7 , pp. 1002079
    • Zhao, J.1    Wu, H.2    Khosravi, M.3    Cui, H.4    Qian, X.5    Kelly, J.A.6    Kaufman, K.M.7    Langefeld, C.D.8    Williams, A.H.9    Comeau, M.E.10
  • 29
    • 0031229830 scopus 로고    scopus 로고
    • Updating the American College of Rheumatology revised criteria for the classification of systemic lupus erythematosus
    • M.C. Hochberg Updating the American College of Rheumatology revised criteria for the classification of systemic lupus erythematosus Arthritis Rheum. 40 1997 1725
    • (1997) Arthritis Rheum. , vol.40 , pp. 1725
    • Hochberg, M.C.1
  • 30
    • 13444269543 scopus 로고    scopus 로고
    • Haploview: Analysis and visualization of LD and haplotype maps
    • J.C. Barrett, B. Fry, J. Maller, and M.J. Daly Haploview: Analysis and visualization of LD and haplotype maps Bioinformatics 21 2005 263 265
    • (2005) Bioinformatics , vol.21 , pp. 263-265
    • Barrett, J.C.1    Fry, B.2    Maller, J.3    Daly, M.J.4
  • 31
    • 33746512512 scopus 로고    scopus 로고
    • Principal components analysis corrects for stratification in genome-wide association studies
    • A.L. Price, N.J. Patterson, R.M. Plenge, M.E. Weinblatt, N.A. Shadick, and D. Reich Principal components analysis corrects for stratification in genome-wide association studies Nat. Genet. 38 2006 904 909
    • (2006) Nat. Genet. , vol.38 , pp. 904-909
    • Price, A.L.1    Patterson, N.J.2    Plenge, R.M.3    Weinblatt, M.E.4    Shadick, N.A.5    Reich, D.6
  • 32
    • 0033930943 scopus 로고    scopus 로고
    • Estimation of admixture and detection of linkage in admixed populations by a Bayesian approach: Application to African-American populations
    • P.M. McKeigue, J.R. Carpenter, E.J. Parra, and M.D. Shriver Estimation of admixture and detection of linkage in admixed populations by a Bayesian approach: Application to African-American populations Ann. Hum. Genet. 64 2000 171 186
    • (2000) Ann. Hum. Genet. , vol.64 , pp. 171-186
    • McKeigue, P.M.1    Carpenter, J.R.2    Parra, E.J.3    Shriver, M.D.4
  • 36
    • 42949172329 scopus 로고    scopus 로고
    • A panel of ancestry informative markers for estimating individual biogeographical ancestry and admixture from four continents: Utility and applications
    • I. Halder, M. Shriver, M. Thomas, J.R. Fernandez, and T. Frudakis A panel of ancestry informative markers for estimating individual biogeographical ancestry and admixture from four continents: Utility and applications Hum. Mutat. 29 2008 648 658
    • (2008) Hum. Mutat. , vol.29 , pp. 648-658
    • Halder, I.1    Shriver, M.2    Thomas, M.3    Fernandez, J.R.4    Frudakis, T.5
  • 38
    • 77955894071 scopus 로고    scopus 로고
    • METAL: Fast and efficient meta-analysis of genomewide association scans
    • C.J. Willer, Y. Li, and G.R. Abecasis METAL: Fast and efficient meta-analysis of genomewide association scans Bioinformatics 26 2010 2190 2191
    • (2010) Bioinformatics , vol.26 , pp. 2190-2191
    • Willer, C.J.1    Li, Y.2    Abecasis, G.R.3
  • 39
    • 41049093347 scopus 로고
    • The Combination of Estimates from Different Experiments
    • W.G. Cochran The Combination of Estimates from Different Experiments Biometrics 10 1954 101 129
    • (1954) Biometrics , vol.10 , pp. 101-129
    • Cochran, W.G.1
  • 41
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • H. Li, and R. Durbin Fast and accurate short read alignment with Burrows-Wheeler transform Bioinformatics 25 2009 1754 1760
    • (2009) Bioinformatics , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 43
    • 35348817330 scopus 로고    scopus 로고
    • Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localized haplotype clustering
    • S.R. Browning, and B.L. Browning Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localized haplotype clustering Am. J. Hum. Genet. 81 2007 1084 1097
    • (2007) Am. J. Hum. Genet. , vol.81 , pp. 1084-1097
    • Browning, S.R.1    Browning, B.L.2
  • 46
    • 67651222400 scopus 로고    scopus 로고
    • A flexible and accurate genotype imputation method for the next generation of genome-wide association studies
    • B.N. Howie, P. Donnelly, and J. Marchini A flexible and accurate genotype imputation method for the next generation of genome-wide association studies PLoS Genet. 5 2009 e1000529
    • (2009) PLoS Genet. , vol.5 , pp. 1000529
    • Howie, B.N.1    Donnelly, P.2    Marchini, J.3
  • 47
    • 77952586314 scopus 로고    scopus 로고
    • The 1000 Genomes Project: New opportunities for research and social challenges
    • M. Via, C. Gignoux, and E.G. Burchard The 1000 Genomes Project: New opportunities for research and social challenges Genome Med. 2 2010 3
    • (2010) Genome Med. , vol.2 , pp. 3
    • Via, M.1    Gignoux, C.2    Burchard, E.G.3
  • 48
    • 84975742565 scopus 로고    scopus 로고
    • A map of human genome variation from population-scale sequencing
    • 1000 Genomes Project Consortium
    • 1000 Genomes Project Consortium A map of human genome variation from population-scale sequencing Nature 467 2010 1061 1073
    • (2010) Nature , vol.467 , pp. 1061-1073
  • 49
    • 34250305146 scopus 로고    scopus 로고
    • Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
    • ENCODE Project Consortium NISC Comparative Sequencing Program Baylor College of Medicine Human Genome Sequencing Center Washington University Genome Sequencing Center Broad Institute Children's Hospital Oakland Research Institute
    • E. Birney, J.A. Stamatoyannopoulos, A. Dutta, R. Guigó, T.R. Gingeras, E.H. Margulies, Z. Weng, M. Snyder, E.T. Dermitzakis, R.E. Thurman ENCODE Project Consortium NISC Comparative Sequencing Program Baylor College of Medicine Human Genome Sequencing Center Washington University Genome Sequencing Center Broad Institute Children's Hospital Oakland Research Institute Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project Nature 447 2007 799 816
    • (2007) Nature , vol.447 , pp. 799-816
    • Birney, E.1    Stamatoyannopoulos, J.A.2    Dutta, A.3    Guigó, R.4    Gingeras, T.R.5    Margulies, E.H.6    Weng, Z.7    Snyder, M.8    Dermitzakis, E.T.9    Thurman, R.E.10
  • 50
    • 42649114059 scopus 로고    scopus 로고
    • The IRF family transcription factors in immunity and oncogenesis
    • T. Tamura, H. Yanai, D. Savitsky, and T. Taniguchi The IRF family transcription factors in immunity and oncogenesis Annu. Rev. Immunol. 26 2008 535 584
    • (2008) Annu. Rev. Immunol. , vol.26 , pp. 535-584
    • Tamura, T.1    Yanai, H.2    Savitsky, D.3    Taniguchi, T.4
  • 51
    • 7044269643 scopus 로고    scopus 로고
    • The emerging role of interferon in human systemic lupus erythematosus
    • E.C. Baechler, P.K. Gregersen, and T.W. Behrens The emerging role of interferon in human systemic lupus erythematosus Curr. Opin. Immunol. 16 2004 801 807
    • (2004) Curr. Opin. Immunol. , vol.16 , pp. 801-807
    • Baechler, E.C.1    Gregersen, P.K.2    Behrens, T.W.3
  • 53
    • 67649876123 scopus 로고    scopus 로고
    • Meta-analysis of genome scans and replication identify CD6, IRF8 and TNFRSF1A as new multiple sclerosis susceptibility loci
    • International MS Genetics Consortium
    • P.L. De Jager, X. Jia, J. Wang, P.I. de Bakker, L. Ottoboni, N.T. Aggarwal, L. Piccio, S. Raychaudhuri, D. Tran, C. Aubin International MS Genetics Consortium Meta-analysis of genome scans and replication identify CD6, IRF8 and TNFRSF1A as new multiple sclerosis susceptibility loci Nat. Genet. 41 2009 776 782
    • (2009) Nat. Genet. , vol.41 , pp. 776-782
    • De Jager, P.L.1    Jia, X.2    Wang, J.3    De Bakker, P.I.4    Ottoboni, L.5    Aggarwal, N.T.6    Piccio, L.7    Raychaudhuri, S.8    Tran, D.9    Aubin, C.10
  • 54
    • 77950544633 scopus 로고    scopus 로고
    • Comprehensive follow-up of the first genome-wide association study of multiple sclerosis identifies KIF21B and TMEM39A as susceptibility loci
    • International Multiple Sclerosis Genetics Consortium (IMSGC)
    • International Multiple Sclerosis Genetics Consortium (IMSGC) Comprehensive follow-up of the first genome-wide association study of multiple sclerosis identifies KIF21B and TMEM39A as susceptibility loci Hum. Mol. Genet. 19 2010 953 962
    • (2010) Hum. Mol. Genet. , vol.19 , pp. 953-962
  • 61
    • 0037442214 scopus 로고    scopus 로고
    • Lack of the transcriptional coactivator OBF-1 prevents the development of systemic lupus erythematosus-like phenotypes in Aiolos mutant mice
    • J. Sun, G. Matthias, M.J. Mihatsch, K. Georgopoulos, and P. Matthias Lack of the transcriptional coactivator OBF-1 prevents the development of systemic lupus erythematosus-like phenotypes in Aiolos mutant mice J. Immunol. 170 2003 1699 1706
    • (2003) J. Immunol. , vol.170 , pp. 1699-1706
    • Sun, J.1    Matthias, G.2    Mihatsch, M.J.3    Georgopoulos, K.4    Matthias, P.5
  • 62
    • 77954886757 scopus 로고    scopus 로고
    • IL12A, MPHOSPH9/CDK2AP1 and RGS1 are novel multiple sclerosis susceptibility loci
    • International Multiple Sclerosis Genetics Conssortium (IMSGC)
    • International Multiple Sclerosis Genetics Conssortium (IMSGC) IL12A, MPHOSPH9/CDK2AP1 and RGS1 are novel multiple sclerosis susceptibility loci Genes Immun. 11 2010 397 405
    • (2010) Genes Immun. , vol.11 , pp. 397-405
  • 63
    • 33750133513 scopus 로고    scopus 로고
    • Interleukin-12 and Th1 immune response in Crohn's disease: Pathogenetic relevance and therapeutic implication
    • I. Peluso, F. Pallone, and G. Monteleone Interleukin-12 and Th1 immune response in Crohn's disease: Pathogenetic relevance and therapeutic implication World J. Gastroenterol. 12 2006 5606 5610
    • (2006) World J. Gastroenterol. , vol.12 , pp. 5606-5610
    • Peluso, I.1    Pallone, F.2    Monteleone, G.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.